Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093861

Identifier: 20093861

GI number: 20093861

Start: 397587

End: 398081

Strand: Direct

Name: 20093861

Synonym: MK0423

Alternate gene names: NA

Gene position: 397587-398081 (Clockwise)

Preceding gene: 20093860

Following gene: 20093862

Centisome position: 23.46

GC content: 58.79

Gene sequence:

>495_bases
GTGGACCTAAGGTACCTAACCAGCGCCATCTCGGTATCGCTGTTCGTTTACTCGGGCATAGACACAGAGCCGCTCCAGTA
CGTGACGGCCCAGTGGGTGGAAAGTGTGCTCCACTTAATGGGGCTCACCGTTCCCAAGGCCGGCTACACGTTCCAAGTCG
GAACCGTAAGTGCGATGATCGTGAAGGGATGCGTCGTCTGGCCCGCTATCTCGCTGTTCGTAGGATTGATCGTCGCCACT
CCCGGCCCATCCGTACTCCGGAAAATCGCCGCCCTCGCCGCGTCCGTAGCACTGCTCACGGCCGGCAACGTGCTAAGGCT
GGCGAGCATGTTCTACATGATGGAGGTGTGGGGAGTAGGGTTCCGACTAGCCCACGATGTGATCGGTCAGTTGGTGGGAC
TCGCCATCGTCATACTAGCGGCGTGGGTGGCGTTCTATATCGTGCCGGAAACCGAAGATAAGCTCCGTGAAATAATCCCT
TGGCCGGGTGAGTGA

Upstream 100 bases:

>100_bases
AGACGACCTGCTCATGATGCTATCGGCGGCGTGGGTGATCCAAACCTTCGGAGTCTCGGGCTTAATGCGGCTCCTAGGGC
TGATGCCGGGGTGGTGAGGG

Downstream 100 bases:

>100_bases
AGTGGGAGAACAATACGACTCGGACCTACATCTACACTCCCAGTACTCGGGCGGTACCTCACCGAGAATGGTGATACGGG
AGATAGCACGAGGAGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MDLRYLTSAISVSLFVYSGIDTEPLQYVTAQWVESVLHLMGLTVPKAGYTFQVGTVSAMIVKGCVVWPAISLFVGLIVAT
PGPSVLRKIAALAASVALLTAGNVLRLASMFYMMEVWGVGFRLAHDVIGQLVGLAIVILAAWVAFYIVPETEDKLREIIP
WPGE

Sequences:

>Translated_164_residues
MDLRYLTSAISVSLFVYSGIDTEPLQYVTAQWVESVLHLMGLTVPKAGYTFQVGTVSAMIVKGCVVWPAISLFVGLIVAT
PGPSVLRKIAALAASVALLTAGNVLRLASMFYMMEVWGVGFRLAHDVIGQLVGLAIVILAAWVAFYIVPETEDKLREIIP
WPGE
>Mature_164_residues
MDLRYLTSAISVSLFVYSGIDTEPLQYVTAQWVESVLHLMGLTVPKAGYTFQVGTVSAMIVKGCVVWPAISLFVGLIVAT
PGPSVLRKIAALAASVALLTAGNVLRLASMFYMMEVWGVGFRLAHDVIGQLVGLAIVILAAWVAFYIVPETEDKLREIIP
WPGE

Specific function: Unknown

COG id: COG4083

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17740; Mature: 17740

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRYLTSAISVSLFVYSGIDTEPLQYVTAQWVESVLHLMGLTVPKAGYTFQVGTVSAMI
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHH
VKGCVVWPAISLFVGLIVATPGPSVLRKIAALAASVALLTAGNVLRLASMFYMMEVWGVG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
FRLAHDVIGQLVGLAIVILAAWVAFYIVPETEDKLREIIPWPGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MDLRYLTSAISVSLFVYSGIDTEPLQYVTAQWVESVLHLMGLTVPKAGYTFQVGTVSAMI
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHH
VKGCVVWPAISLFVGLIVATPGPSVLRKIAALAASVALLTAGNVLRLASMFYMMEVWGVG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
FRLAHDVIGQLVGLAIVILAAWVAFYIVPETEDKLREIIPWPGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA