| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197120082
Identifier: 197120082
GI number: 197120082
Start: 4248601
End: 4249440
Strand: Direct
Name: 197120082
Synonym: Gbem_3721
Alternate gene names: NA
Gene position: 4248601-4249440 (Clockwise)
Preceding gene: 197120081
Following gene: 308535385
Centisome position: 92.06
GC content: 59.64
Gene sequence:
>840_bases ATGAGTTTCGCGTTGCACCAGATGCTGCAGGATTTGCCTTTAATCGACATCCTCGATGTGGGGGCGATGTCGCTTGGGGG AGCCTCCGCTTACCAGCAGCTCGTCCACCACGGGAAGACGCGAGTCATCGGCTTCGAGCCGGGCCAGGAGGAGTGCAGAA AGCTCAACGAAAAGATGGGGCCTCCGCACATCTTCTTCCCCTTTTTCATCGGCGACGGCAAACCCGCGACCTATTACGAG ACCAACGAGGTCATGACCGGCTCGCTGTACCGGCCAAACACCCGGCTTTTGGAAAAGTTCCAGAACCTGGCCGAGCTGAC GGTACCGGTGCGTACCCACGAGGTCGAGACCAGAAGGCTGGACGACATCGAAGGGATCGGCAGCGTCGACTTCATCAAGA TGGACGTGCAGGGGAGCGAGTTGAACGTGTTCAAAGGGGCTTCCAAGGTGCTGGAATCGGCGCTGGTGATACAGGTCGAA GTGGAGTTTGTCGAGCTGTACCAGGGACAGCCGATGTTCGGCGACGTCGACCAGTACCTGCGCGGCAAGGGGTACCAGTT CCACACCTTCCTCGGGTTCGGCAAGCGCTGCTTCAAGCCCCTGGTGGTCAACGACAACATAAACGACGGCCTGAACCAGT ACCTTTGGAGCGACGCCATCTACGTGAAGGACTGGATGCGGCTGGAAAACCTCTCCACGGTGCAGCTTAAGAAATACGCG GTACTTTTGCACGACCTGTTCAGGTCCGCCGATCTCTGCCACCTGCTGCTCTCTACCGTCGACGGCAGGGAGGGGACCGG CCTCGCCGGCCGCTACCTGCAGATGTGCAGCGGCCGCTGA
Upstream 100 bases:
>100_bases AAACTGCCGGGGTAACCGGCCCCCGGCGAGGAGGCGGCCCTTACCCTTACACGGGCAGCAAAGGCGTTCCCACCCGATAC CAGTAGCACGAGGAGGAAGC
Downstream 100 bases:
>100_bases CCTCACCTTCCCGGCAGCCGTACCACCCAGAGCCCCAGCACCGGCAACCCTCCCCTCACCCTTCAATATTTTGACGGCAT CTGCCAACGGTTCATTAACG
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase FkbM Family; Methyltransferase FkbM; TPR Domain Protein; Methyltransferase FkbM Family Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSFALHQMLQDLPLIDILDVGAMSLGGASAYQQLVHHGKTRVIGFEPGQEECRKLNEKMGPPHIFFPFFIGDGKPATYYE TNEVMTGSLYRPNTRLLEKFQNLAELTVPVRTHEVETRRLDDIEGIGSVDFIKMDVQGSELNVFKGASKVLESALVIQVE VEFVELYQGQPMFGDVDQYLRGKGYQFHTFLGFGKRCFKPLVVNDNINDGLNQYLWSDAIYVKDWMRLENLSTVQLKKYA VLLHDLFRSADLCHLLLSTVDGREGTGLAGRYLQMCSGR
Sequences:
>Translated_279_residues MSFALHQMLQDLPLIDILDVGAMSLGGASAYQQLVHHGKTRVIGFEPGQEECRKLNEKMGPPHIFFPFFIGDGKPATYYE TNEVMTGSLYRPNTRLLEKFQNLAELTVPVRTHEVETRRLDDIEGIGSVDFIKMDVQGSELNVFKGASKVLESALVIQVE VEFVELYQGQPMFGDVDQYLRGKGYQFHTFLGFGKRCFKPLVVNDNINDGLNQYLWSDAIYVKDWMRLENLSTVQLKKYA VLLHDLFRSADLCHLLLSTVDGREGTGLAGRYLQMCSGR >Mature_278_residues SFALHQMLQDLPLIDILDVGAMSLGGASAYQQLVHHGKTRVIGFEPGQEECRKLNEKMGPPHIFFPFFIGDGKPATYYET NEVMTGSLYRPNTRLLEKFQNLAELTVPVRTHEVETRRLDDIEGIGSVDFIKMDVQGSELNVFKGASKVLESALVIQVEV EFVELYQGQPMFGDVDQYLRGKGYQFHTFLGFGKRCFKPLVVNDNINDGLNQYLWSDAIYVKDWMRLENLSTVQLKKYAV LLHDLFRSADLCHLLLSTVDGREGTGLAGRYLQMCSGR
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31595; Mature: 31464
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFALHQMLQDLPLIDILDVGAMSLGGASAYQQLVHHGKTRVIGFEPGQEECRKLNEKMG CCHHHHHHHHHCCCEEHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCC PPHIFFPFFIGDGKPATYYETNEVMTGSLYRPNTRLLEKFQNLAELTVPVRTHEVETRRL CCEEEEEEEECCCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH DDIEGIGSVDFIKMDVQGSELNVFKGASKVLESALVIQVEVEFVELYQGQPMFGDVDQYL HCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHEEEEEEEEEHHHHCCCCCCCCHHHHH RGKGYQFHTFLGFGKRCFKPLVVNDNINDGLNQYLWSDAIYVKDWMRLENLSTVQLKKYA CCCCCEEEHHHHCCHHHCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHH VLLHDLFRSADLCHLLLSTVDGREGTGLAGRYLQMCSGR HHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SFALHQMLQDLPLIDILDVGAMSLGGASAYQQLVHHGKTRVIGFEPGQEECRKLNEKMG CHHHHHHHHHCCCEEHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCC PPHIFFPFFIGDGKPATYYETNEVMTGSLYRPNTRLLEKFQNLAELTVPVRTHEVETRRL CCEEEEEEEECCCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH DDIEGIGSVDFIKMDVQGSELNVFKGASKVLESALVIQVEVEFVELYQGQPMFGDVDQYL HCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHEEEEEEEEEHHHHCCCCCCCCHHHHH RGKGYQFHTFLGFGKRCFKPLVVNDNINDGLNQYLWSDAIYVKDWMRLENLSTVQLKKYA CCCCCEEEHHHHCCHHHCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHH VLLHDLFRSADLCHLLLSTVDGREGTGLAGRYLQMCSGR HHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA