Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is ykuE [H]

Identifier: 197120076

GI number: 197120076

Start: 4239282

End: 4240136

Strand: Direct

Name: ykuE [H]

Synonym: Gbem_3715

Alternate gene names: 197120076

Gene position: 4239282-4240136 (Clockwise)

Preceding gene: 197120050

Following gene: 197120078

Centisome position: 91.86

GC content: 65.5

Gene sequence:

>855_bases
ATGGCAGCAATCAGCAGGCGCCTGTTTCTCCTGGGGGGATTTTCCCTTTTCCCCTACCTCTACCTGGAAAGGTCGTCGGT
GGCGGTGCGCAGGTACCGGGTGCCGGTGAGAAATCTCCCCGAGGCCCTTGCCGGGTTCACCATCCTGCACCTGACCGACC
TGCACGACAAGGAGTTCGGGGAGGGGAACGAAGAGCTTCTCGAACTGCTGCGCCGCCTGCGCTTCGACCTGGTGGCGCTG
ACTGGGGACCTCGTGGTCGGGGGGAACCCGCTCCTCAAACCTGCGCTCGATCTCTTGGCGGGGATACGCCGCTTTTCCAA
CGCGCCGGTCTATTCGGTCCCCGGCAATCACGAATATACCCTCTCCCGCATAGAGGAACACAACGAGAAGCTTGCCCGGG
CGGGGGTCCAGTTGCTGAGTAACAAAGCGGTGCCGCTCAAGTTCGGGAAGGCGCGGCTCTGGGTGGCGGGGGTGGACGAC
CCGGTGACCCGCAGGGCCCGGCTGGACCAGGCACTTGCTGAAGCCGACGCGCGGTCGCCTCGGGTTTTGCTCTCCCACGC
GCCGCACCCCTTCCCTGAGGCGGCGCTCCAGGGAGTCGACCTTATGCTCGCCGGGCATACCCACGGAGGGCAGATCCGCC
TCCCGCTTATCGGCGCCGCCTACGTCCCGGACATGGGGCTCTTTCCCGAATGGGACTACGGCCTTTACAGCTCGGGGACT
ACCTCCCTCATCGTCAATGGGGGGCTCGGAGAAAGCTGGCTTCCGCTACGCGTCAACATCAGGCCGGAAGTGGTGCTGGC
GACCCTCACGCCGCTTCGGGAAGCAGGGCCGGGGGCAAACTACGGGGTCGCCTGA

Upstream 100 bases:

>100_bases
TTCGCCCTCCGTCCGGTTCGCGGCTGCTCCCGATTTCTGGCGCTGCAACGGCAAACTGATATACTCTGGCTCGGTTTTTT
ACTGAGGAGGACGTGTAGCT

Downstream 100 bases:

>100_bases
CCTCCCTGCGCCGGGAGGACCACCTCGGCCATAAGCTCCGCCATGCGCCCTGCCGGAAGCCTCGCGTTGTTGAAGACCAG
ATGGTACAGGGTCGGCTCCG

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MAAISRRLFLLGGFSLFPYLYLERSSVAVRRYRVPVRNLPEALAGFTILHLTDLHDKEFGEGNEELLELLRRLRFDLVAL
TGDLVVGGNPLLKPALDLLAGIRRFSNAPVYSVPGNHEYTLSRIEEHNEKLARAGVQLLSNKAVPLKFGKARLWVAGVDD
PVTRRARLDQALAEADARSPRVLLSHAPHPFPEAALQGVDLMLAGHTHGGQIRLPLIGAAYVPDMGLFPEWDYGLYSSGT
TSLIVNGGLGESWLPLRVNIRPEVVLATLTPLREAGPGANYGVA

Sequences:

>Translated_284_residues
MAAISRRLFLLGGFSLFPYLYLERSSVAVRRYRVPVRNLPEALAGFTILHLTDLHDKEFGEGNEELLELLRRLRFDLVAL
TGDLVVGGNPLLKPALDLLAGIRRFSNAPVYSVPGNHEYTLSRIEEHNEKLARAGVQLLSNKAVPLKFGKARLWVAGVDD
PVTRRARLDQALAEADARSPRVLLSHAPHPFPEAALQGVDLMLAGHTHGGQIRLPLIGAAYVPDMGLFPEWDYGLYSSGT
TSLIVNGGLGESWLPLRVNIRPEVVLATLTPLREAGPGANYGVA
>Mature_283_residues
AAISRRLFLLGGFSLFPYLYLERSSVAVRRYRVPVRNLPEALAGFTILHLTDLHDKEFGEGNEELLELLRRLRFDLVALT
GDLVVGGNPLLKPALDLLAGIRRFSNAPVYSVPGNHEYTLSRIEEHNEKLARAGVQLLSNKAVPLKFGKARLWVAGVDDP
VTRRARLDQALAEADARSPRVLLSHAPHPFPEAALQGVDLMLAGHTHGGQIRLPLIGAAYVPDMGLFPEWDYGLYSSGTT
SLIVNGGLGESWLPLRVNIRPEVVLATLTPLREAGPGANYGVA

Specific function: Unknown

COG id: COG1408

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

Organism=Homo sapiens, GI210031196, Length=265, Percent_Identity=28.6792452830189, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI210031210, Length=265, Percent_Identity=28.6792452830189, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI87081695, Length=278, Percent_Identity=30.5755395683453, Blast_Score=85, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI115535030, Length=279, Percent_Identity=26.8817204301075, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI115535028, Length=279, Percent_Identity=26.8817204301075, Blast_Score=81, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 31047; Mature: 30916

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAISRRLFLLGGFSLFPYLYLERSSVAVRRYRVPVRNLPEALAGFTILHLTDLHDKEFG
CCCHHHHHHHHCCHHHHHHHEEECCHHEEHHHCCCHHHHHHHHHCEEEEEEECCCCCCCC
EGNEELLELLRRLRFDLVALTGDLVVGGNPLLKPALDLLAGIRRFSNAPVYSVPGNHEYT
CCCHHHHHHHHHHHHHHEEEECCEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHH
LSRIEEHNEKLARAGVQLLSNKAVPLKFGKARLWVAGVDDPVTRRARLDQALAEADARSP
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
RVLLSHAPHPFPEAALQGVDLMLAGHTHGGQIRLPLIGAAYVPDMGLFPEWDYGLYSSGT
EEEECCCCCCCHHHHHCCCEEEEECCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCCCC
TSLIVNGGLGESWLPLRVNIRPEVVLATLTPLREAGPGANYGVA
CEEEEECCCCCCCCEEEECCCCCEEEEEHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AAISRRLFLLGGFSLFPYLYLERSSVAVRRYRVPVRNLPEALAGFTILHLTDLHDKEFG
CCHHHHHHHHCCHHHHHHHEEECCHHEEHHHCCCHHHHHHHHHCEEEEEEECCCCCCCC
EGNEELLELLRRLRFDLVALTGDLVVGGNPLLKPALDLLAGIRRFSNAPVYSVPGNHEYT
CCCHHHHHHHHHHHHHHEEEECCEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHH
LSRIEEHNEKLARAGVQLLSNKAVPLKFGKARLWVAGVDDPVTRRARLDQALAEADARSP
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
RVLLSHAPHPFPEAALQGVDLMLAGHTHGGQIRLPLIGAAYVPDMGLFPEWDYGLYSSGT
EEEECCCCCCCHHHHHCCCEEEEECCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCCCC
TSLIVNGGLGESWLPLRVNIRPEVVLATLTPLREAGPGANYGVA
CEEEEECCCCCCCCEEEECCCCCEEEEEHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]