Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119943

Identifier: 197119943

GI number: 197119943

Start: 4100738

End: 4101130

Strand: Direct

Name: 197119943

Synonym: Gbem_3582

Alternate gene names: NA

Gene position: 4100738-4101130 (Clockwise)

Preceding gene: 197119941

Following gene: 197119944

Centisome position: 88.85

GC content: 52.42

Gene sequence:

>393_bases
ATGTTCAAGATCAAAATCAAGTTGAATGGTAGGGATTCCGTTTTCATTGCCAACAGCGAACGGTACATCACCGGTATGGA
AAATATCGGGGCATACAAGGGTGTCACCGGGGATTCACCGCCCTCCATTGATCTCTTAAAACAAACCTTTGGCCAGTACA
AGCAGTGCTTCGAAAAGGGCGCAACCGGTGACCGCATCCAGATCACCATGCGAAACCGAACCCGAAAGGAGCTTAAGGAG
ATGTTCCAAAAGGCCCAGAATTACCTACAGGCAGTGGCGAGCGAGGCAGACCTGCCGGCACTACTGCAAGCAGGGTTCGA
GTTACGAAGTGCAGGAGTACGTGGCAAACGCGGCACCGGCACTGTACCACCCACAGAACCACAAGGGTCTTAG

Upstream 100 bases:

>100_bases
ACCTTTGTCTATTCAGCCCTTGCAGCCTGCAAAACGGCGGATAAGATCGTGGGGTGCTTCGGATGCTGACCGAGGTAAAC
CGCTGTAAAAGGAGGTCCAG

Downstream 100 bases:

>100_bases
TCTCCTTTTTGTCACCCCTCAGTCAGCGGAAGCAGTTGCTCTACTTGATCTACCCCCGGAGGCCGTTCAGCAAGTGCATT
GGAACAGCCTCCCGGGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MFKIKIKLNGRDSVFIANSERYITGMENIGAYKGVTGDSPPSIDLLKQTFGQYKQCFEKGATGDRIQITMRNRTRKELKE
MFQKAQNYLQAVASEADLPALLQAGFELRSAGVRGKRGTGTVPPTEPQGS

Sequences:

>Translated_130_residues
MFKIKIKLNGRDSVFIANSERYITGMENIGAYKGVTGDSPPSIDLLKQTFGQYKQCFEKGATGDRIQITMRNRTRKELKE
MFQKAQNYLQAVASEADLPALLQAGFELRSAGVRGKRGTGTVPPTEPQGS
>Mature_130_residues
MFKIKIKLNGRDSVFIANSERYITGMENIGAYKGVTGDSPPSIDLLKQTFGQYKQCFEKGATGDRIQITMRNRTRKELKE
MFQKAQNYLQAVASEADLPALLQAGFELRSAGVRGKRGTGTVPPTEPQGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14361; Mature: 14361

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKIKIKLNGRDSVFIANSERYITGMENIGAYKGVTGDSPPSIDLLKQTFGQYKQCFEKG
CEEEEEEECCCCEEEEECCCCEEECHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
ATGDRIQITMRNRTRKELKEMFQKAQNYLQAVASEADLPALLQAGFELRSAGVRGKRGTG
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHCCCCCCCCCC
TVPPTEPQGS
CCCCCCCCCC
>Mature Secondary Structure
MFKIKIKLNGRDSVFIANSERYITGMENIGAYKGVTGDSPPSIDLLKQTFGQYKQCFEKG
CEEEEEEECCCCEEEEECCCCEEECHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
ATGDRIQITMRNRTRKELKEMFQKAQNYLQAVASEADLPALLQAGFELRSAGVRGKRGTG
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHCCCCCCCCCC
TVPPTEPQGS
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA