Click here to switch to the map view.

The map label for this gene is cstA [H]

Identifier: 197119941

GI number: 197119941

Start: 4096947

End: 4098794

Strand: Direct

Name: cstA [H]

Synonym: Gbem_3580

Alternate gene names: 197119941

Gene position: 4096947-4098794 (Clockwise)

Preceding gene: 197119940

Following gene: 197119943

Centisome position: 88.77

GC content: 58.39

Gene sequence:

>1848_bases
ATGAACTCTTTAACCCTGATTTTCGTAACCGCATGCCTCTTCGCCATCGCATACCGTTTCTATGGACTGTTCCTGGCGAA
CAAGGTCTTGAATCTGCGCGAGGAGCGGGAGACGCCGGCTGTCCTCTGTGGGGATGGACATGACTACCTGCCGACCAACA
AGTATGTCCTGTTTGGTCATCACTTTGCCGCCATTGCCGCAGCCGGGCCGCTTCTGGGGCCGGTGCTGGCGGCCCAGTTC
GGATTCCTCCCTGGCGCACTCTGGATTTTGGTCGGCGCGGTGCTGGCAGGTGGGGTGCACGACATGGTCGTGCTGTTCGC
CTCGGTCCGGCATAAGGGGAAAAGCATATCGGTTATCGCCGAAGCCGAGATTGGCAAGGTTGCGGGTAAGGTGGCCTCCA
TCGCTGTGCTTTTCATCCTGATTCTGACATTAGCGGGACTCTGTATCGCCGTCGTCAACGCCATGTTCAACAGCCCTTGG
GGGACCTTTACCGTCTTTGCCACCATCCCCATCGCGATGATCATGGGAACCTACCTGCAGAAAATCCGCCCCGGCGATAT
CCGGGGGGGCAGCCTGATCGGCGTTGTCTTGCTGGCGCTTGCTATCTATGCCGGCCCTTACGTTGCCGCAGATCCAACCC
TGGCGAGCGTGTTCACCTTCTCCAGGAAACAGCTTGCCCTGATCCTTCCGGCCTACGGCTTTGCAGCGTCGGCACTGCCG
GTCTGGTTCCTGCTGGTACCCCGCGATTACCTTTCCACCTATCTCAAAATCGGCACCATCGGCGCACTGGCCTTGGGTAT
TGCCCTTGTCCATCCCCAGCTGCACATGCCGGCTATTACCCCTTACTTCTTCGGTGGCGGCCCGATTATCAACGGCGCAG
CGTTTCCCTTTCTGTTCATCACCATTGCCTGCGGCGCCCTGTCCGGGTTCCACGCCATCATCGGCACCGGCACTACGCCC
AAGATGATAGCCAATGAACGCGACGTCCTCTTTGTCGGGTATGGCGCCATGCTGGTGGAAGGTTTTGTTGCCGTCATGGC
GCTGATCGCGGCCTGCGTACTGCTCCCCGGCGATTACTTCGCAATCAACGCCGCACCTGCCGCCTATGCCAAGCTTGGAC
TAGCTCCGATCAACCTGCCGGACATGGCAGCACAGGTAGGTGAGCAGGTTCAGGGACGTCCCGGAGGCGCCGTCACCCTG
GCGGTGGGCATGGCCTATATCTTCTCATCCTTGCCGTTCATGAAGGGGATGATGGCTTACTGGTATCACTTCGCAATAAT
GTTCGAAGCGGTCTTCATCTTGACCGCCGTCGATGCCGGTACCCGCGTGGGGCGCTATCTGCTGCAGGAGATGCTCGGCA
AGGTATACGCACCATTTGCAGACAACGCCTGGACACCCGGCATTATCCTGACCAGCGCCCTGTTCACCTCTGCCTGGGGC
TATCTGGTATATACCGGTGACATATCGACCATCTGGCCGTTGTTCGGCATGAGCAATCAGCTCCTCGCCACCTGTGCCCT
AATTGTCGGCACAACCATGCTGATCAGGCTCGGCAAGTTAAAATTTGCCTGGGTCACCGCCGGACCCGGCCTGTTCATGA
TGCCTATCTGCATGTGGGCTGGGTATCTTAACGTCACGCAGAACTTCCTGCCCAAGGGGCTGTATCTTCTGGCAAGCCTG
TCCGTTATCCTGATGATTCTTATGACCATTGTATTTGTGGAGGCGTTCCGGCGCTGGTACGCGCTCCTGCGGATAGGAAA
AACGGTTTTCGACAGCCACGGAGATCAGGTGCTGGCACTGGCCATGGAGCGGGAAGAGTCTGAGGTTGTCCTGCCGGCGC
AGGAATGA

Upstream 100 bases:

>100_bases
TTAATTCAAGCAAGGAGAGTGAAATGAATGCAACTAAGAAGATGATGAGCGAGGATGTTTCGACTTTTCCGGTCAAACTT
CTGAAAAAAGGACAAATCCA

Downstream 100 bases:

>100_bases
CAGCACAATTACGTGCGCGAACCAGATCGGCCCGAGTGCTCGGGCCGATCTGAGGGCGCGGCTACCACCCGTAGCCGGTG
TTGGCTTTAGGGGGTGCGGC

Product: carbon starvation protein CstA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MNSLTLIFVTACLFAIAYRFYGLFLANKVLNLREERETPAVLCGDGHDYLPTNKYVLFGHHFAAIAAAGPLLGPVLAAQF
GFLPGALWILVGAVLAGGVHDMVVLFASVRHKGKSISVIAEAEIGKVAGKVASIAVLFILILTLAGLCIAVVNAMFNSPW
GTFTVFATIPIAMIMGTYLQKIRPGDIRGGSLIGVVLLALAIYAGPYVAADPTLASVFTFSRKQLALILPAYGFAASALP
VWFLLVPRDYLSTYLKIGTIGALALGIALVHPQLHMPAITPYFFGGGPIINGAAFPFLFITIACGALSGFHAIIGTGTTP
KMIANERDVLFVGYGAMLVEGFVAVMALIAACVLLPGDYFAINAAPAAYAKLGLAPINLPDMAAQVGEQVQGRPGGAVTL
AVGMAYIFSSLPFMKGMMAYWYHFAIMFEAVFILTAVDAGTRVGRYLLQEMLGKVYAPFADNAWTPGIILTSALFTSAWG
YLVYTGDISTIWPLFGMSNQLLATCALIVGTTMLIRLGKLKFAWVTAGPGLFMMPICMWAGYLNVTQNFLPKGLYLLASL
SVILMILMTIVFVEAFRRWYALLRIGKTVFDSHGDQVLALAMEREESEVVLPAQE

Sequences:

>Translated_615_residues
MNSLTLIFVTACLFAIAYRFYGLFLANKVLNLREERETPAVLCGDGHDYLPTNKYVLFGHHFAAIAAAGPLLGPVLAAQF
GFLPGALWILVGAVLAGGVHDMVVLFASVRHKGKSISVIAEAEIGKVAGKVASIAVLFILILTLAGLCIAVVNAMFNSPW
GTFTVFATIPIAMIMGTYLQKIRPGDIRGGSLIGVVLLALAIYAGPYVAADPTLASVFTFSRKQLALILPAYGFAASALP
VWFLLVPRDYLSTYLKIGTIGALALGIALVHPQLHMPAITPYFFGGGPIINGAAFPFLFITIACGALSGFHAIIGTGTTP
KMIANERDVLFVGYGAMLVEGFVAVMALIAACVLLPGDYFAINAAPAAYAKLGLAPINLPDMAAQVGEQVQGRPGGAVTL
AVGMAYIFSSLPFMKGMMAYWYHFAIMFEAVFILTAVDAGTRVGRYLLQEMLGKVYAPFADNAWTPGIILTSALFTSAWG
YLVYTGDISTIWPLFGMSNQLLATCALIVGTTMLIRLGKLKFAWVTAGPGLFMMPICMWAGYLNVTQNFLPKGLYLLASL
SVILMILMTIVFVEAFRRWYALLRIGKTVFDSHGDQVLALAMEREESEVVLPAQE
>Mature_615_residues
MNSLTLIFVTACLFAIAYRFYGLFLANKVLNLREERETPAVLCGDGHDYLPTNKYVLFGHHFAAIAAAGPLLGPVLAAQF
GFLPGALWILVGAVLAGGVHDMVVLFASVRHKGKSISVIAEAEIGKVAGKVASIAVLFILILTLAGLCIAVVNAMFNSPW
GTFTVFATIPIAMIMGTYLQKIRPGDIRGGSLIGVVLLALAIYAGPYVAADPTLASVFTFSRKQLALILPAYGFAASALP
VWFLLVPRDYLSTYLKIGTIGALALGIALVHPQLHMPAITPYFFGGGPIINGAAFPFLFITIACGALSGFHAIIGTGTTP
KMIANERDVLFVGYGAMLVEGFVAVMALIAACVLLPGDYFAINAAPAAYAKLGLAPINLPDMAAQVGEQVQGRPGGAVTL
AVGMAYIFSSLPFMKGMMAYWYHFAIMFEAVFILTAVDAGTRVGRYLLQEMLGKVYAPFADNAWTPGIILTSALFTSAWG
YLVYTGDISTIWPLFGMSNQLLATCALIVGTTMLIRLGKLKFAWVTAGPGLFMMPICMWAGYLNVTQNFLPKGLYLLASL
SVILMILMTIVFVEAFRRWYALLRIGKTVFDSHGDQVLALAMEREESEVVLPAQE

Specific function: Peptide Utilization During Carbon Starvation. [C]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=569, Percent_Identity=50.2636203866432, Blast_Score=531, Evalue=1e-152,
Organism=Escherichia coli, GI87082431, Length=607, Percent_Identity=46.4579901153213, Blast_Score=513, Evalue=1e-146,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 65838; Mature: 65838

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLTLIFVTACLFAIAYRFYGLFLANKVLNLREERETPAVLCGDGHDYLPTNKYVLFGH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEC
HFAAIAAAGPLLGPVLAAQFGFLPGALWILVGAVLAGGVHDMVVLFASVRHKGKSISVIA
HHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
EAEIGKVAGKVASIAVLFILILTLAGLCIAVVNAMFNSPWGTFTVFATIPIAMIMGTYLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
KIRPGDIRGGSLIGVVLLALAIYAGPYVAADPTLASVFTFSRKQLALILPAYGFAASALP
HCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHH
VWFLLVPRDYLSTYLKIGTIGALALGIALVHPQLHMPAITPYFFGGGPIINGAAFPFLFI
HHHHEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHH
TIACGALSGFHAIIGTGTTPKMIANERDVLFVGYGAMLVEGFVAVMALIAACVLLPGDYF
HHHHHHHHCCHHHEECCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEE
AINAAPAAYAKLGLAPINLPDMAAQVGEQVQGRPGGAVTLAVGMAYIFSSLPFMKGMMAY
EEECCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHH
WYHFAIMFEAVFILTAVDAGTRVGRYLLQEMLGKVYAPFADNAWTPGIILTSALFTSAWG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC
YLVYTGDISTIWPLFGMSNQLLATCALIVGTTMLIRLGKLKFAWVTAGPGLFMMPICMWA
EEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHH
GYLNVTQNFLPKGLYLLASLSVILMILMTIVFVEAFRRWYALLRIGKTVFDSHGDQVLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
AMEREESEVVLPAQE
EEECCCCCEEECCCC
>Mature Secondary Structure
MNSLTLIFVTACLFAIAYRFYGLFLANKVLNLREERETPAVLCGDGHDYLPTNKYVLFGH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEC
HFAAIAAAGPLLGPVLAAQFGFLPGALWILVGAVLAGGVHDMVVLFASVRHKGKSISVIA
HHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
EAEIGKVAGKVASIAVLFILILTLAGLCIAVVNAMFNSPWGTFTVFATIPIAMIMGTYLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
KIRPGDIRGGSLIGVVLLALAIYAGPYVAADPTLASVFTFSRKQLALILPAYGFAASALP
HCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHH
VWFLLVPRDYLSTYLKIGTIGALALGIALVHPQLHMPAITPYFFGGGPIINGAAFPFLFI
HHHHEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHH
TIACGALSGFHAIIGTGTTPKMIANERDVLFVGYGAMLVEGFVAVMALIAACVLLPGDYF
HHHHHHHHCCHHHEECCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEE
AINAAPAAYAKLGLAPINLPDMAAQVGEQVQGRPGGAVTLAVGMAYIFSSLPFMKGMMAY
EEECCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHH
WYHFAIMFEAVFILTAVDAGTRVGRYLLQEMLGKVYAPFADNAWTPGIILTSALFTSAWG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC
YLVYTGDISTIWPLFGMSNQLLATCALIVGTTMLIRLGKLKFAWVTAGPGLFMMPICMWA
EEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHH
GYLNVTQNFLPKGLYLLASLSVILMILMTIVFVEAFRRWYALLRIGKTVFDSHGDQVLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
AMEREESEVVLPAQE
EEECCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]