| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yjgQ [C]
Identifier: 197119770
GI number: 197119770
Start: 3924879
End: 3925961
Strand: Direct
Name: yjgQ [C]
Synonym: Gbem_3408
Alternate gene names: 197119770
Gene position: 3924879-3925961 (Clockwise)
Preceding gene: 197119769
Following gene: 197119771
Centisome position: 85.04
GC content: 61.4
Gene sequence:
>1083_bases ATGAACATCCTCACCCGCTACATCGCCCGGGCCTATGTAAAGATGCTCTCGCTCTGCCTCGGCTCCTTCATCGCCATCTA CCTGGTGGTGGACTTCATGGAGAAGGTCTCCCGCTTCACGCGCTACGGCGCGAGTTGGAAGCACCTGGCCCTCTTCTTCA TCACCAAGATCCCGGAGATGATCATCGATGCGGCGCCCCTTGCCGTCCTGATGGCGACGCTGCTCACCCTCGGGACCCTC TCCCTTACTTCGGAGCTCACCGCCATCCGCAGCTGCGGGGTGAGCCTCTTCCGGATCAGCCTCCCCATCCTGGTCATCTC CGTCCTCATGAGCCTCGGAGTGCTGGCGATAGGGGAGTTTGTGCTTCCCAAAACTTATGCGCAACGCACCTACATCCAGG AGGTGCTGATCCAGAAGAAAAGCCCCAGCGCCTTTTTCCGGCAGCAGAACATCTGGTTTAGGGAGGAAGGGACGGTGCTC AGGGCTAGCCTTTTCGAGCCGGCGAGAAACGAGCTGAAAGGGATCACCCTGTGGGAGCTGCAGCCAGGGACGGGGGAACC GCTCAAGCGCACCGAAGCCGACCTCGCGATCCTGGGAGCTAAGGGATGGATGTTCCGGGACGCGGTGGTGCGGCAGTTCA GGGATGGTGAGGTGAGTTCCACGCAGAAGTACCGGGAGCTGCCGGTAGAGCTCCAGCTAAAGCCCGCCGACCTGAAGACG CTGGGGAAATTTTCGGACAGCATGTCCCTTGTGGAGCTGAGCCGCTACTGCAGGAAGCTAAGAGCCAGCGGCTACGACCC CACCAGGTACGTGACCCAGATGCACAGCAGGATCTCCATGCCCTTCGGCTGCGCCGTGATGGCCTTTCTGGGTATCCCGT TTGCGCTGCGCGGGGGAAGGTCGAGCGGCATCGCCTTCGGAGTCGGCCTCTCCATCGGGGTCGGCTTCCTCTACGTCATC GTCAACTCGGTGATCATCTCGGTGGGACAGGTGGGGCTATTGCCGCCGGTGGTGGCGGCTTGGGCGACGAACTTCATCTT CTTCGTGGCGGGTGCGTGGCTGTCGCTGACGATTGACAACTGA
Upstream 100 bases:
>100_bases TGTTCAAGAAGACCTCCGACGAGGAGCGTCTCCCCATCTTCTCTCTTTACCCGCGCCTCAAGGAGGCGTTGCGGGGACGC CTTAGCAAGGGGAGGAAGCG
Downstream 100 bases:
>100_bases CAAGCGGGAATCGACAATGTTTGGGTGTAGTTAGATCGACTCAATGGAGGGTCGCATGCTTCGCAAACTGTTTTTCCTAC TGCTGGTCCCCTTGCTCTTC
Product: membrane protein
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; Permease YjgP; YjgP/YjgQ Family Permease; Permease Inner Membrane Protein YjgQ; Permease Yjgp/Yjgq Family Protein; Integral Membrane Protein; YjgP/YjgQ Permease
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRYGASWKHLALFFITKIPEMIIDAAPLAVLMATLLTLGTL SLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEFVLPKTYAQRTYIQEVLIQKKSPSAFFRQQNIWFREEGTVL RASLFEPARNELKGITLWELQPGTGEPLKRTEADLAILGAKGWMFRDAVVRQFRDGEVSSTQKYRELPVELQLKPADLKT LGKFSDSMSLVELSRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGGRSSGIAFGVGLSIGVGFLYVI VNSVIISVGQVGLLPPVVAAWATNFIFFVAGAWLSLTIDN
Sequences:
>Translated_360_residues MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRYGASWKHLALFFITKIPEMIIDAAPLAVLMATLLTLGTL SLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEFVLPKTYAQRTYIQEVLIQKKSPSAFFRQQNIWFREEGTVL RASLFEPARNELKGITLWELQPGTGEPLKRTEADLAILGAKGWMFRDAVVRQFRDGEVSSTQKYRELPVELQLKPADLKT LGKFSDSMSLVELSRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGGRSSGIAFGVGLSIGVGFLYVI VNSVIISVGQVGLLPPVVAAWATNFIFFVAGAWLSLTIDN >Mature_360_residues MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRYGASWKHLALFFITKIPEMIIDAAPLAVLMATLLTLGTL SLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEFVLPKTYAQRTYIQEVLIQKKSPSAFFRQQNIWFREEGTVL RASLFEPARNELKGITLWELQPGTGEPLKRTEADLAILGAKGWMFRDAVVRQFRDGEVSSTQKYRELPVELQLKPADLKT LGKFSDSMSLVELSRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGGRSSGIAFGVGLSIGVGFLYVI VNSVIISVGQVGLLPPVVAAWATNFIFFVAGAWLSLTIDN
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39935; Mature: 39935
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRYGASWKHLALFFITKIPEM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IIDAAPLAVLMATLLTLGTLSLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEF HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VLPKTYAQRTYIQEVLIQKKSPSAFFRQQNIWFREEGTVLRASLFEPARNELKGITLWEL HCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCEEHHHHHHHHHHHCCCCEEEEE QPGTGEPLKRTEADLAILGAKGWMFRDAVVRQFRDGEVSSTQKYRELPVELQLKPADLKT CCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCHHHH LGKFSDSMSLVELSRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGGR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCC SSGIAFGVGLSIGVGFLYVIVNSVIISVGQVGLLPPVVAAWATNFIFFVAGAWLSLTIDN CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECC >Mature Secondary Structure MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRYGASWKHLALFFITKIPEM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IIDAAPLAVLMATLLTLGTLSLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEF HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VLPKTYAQRTYIQEVLIQKKSPSAFFRQQNIWFREEGTVLRASLFEPARNELKGITLWEL HCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCEEHHHHHHHHHHHCCCCEEEEE QPGTGEPLKRTEADLAILGAKGWMFRDAVVRQFRDGEVSSTQKYRELPVELQLKPADLKT CCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCHHHH LGKFSDSMSLVELSRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGGR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCC SSGIAFGVGLSIGVGFLYVIVNSVIISVGQVGLLPPVVAAWATNFIFFVAGAWLSLTIDN CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA