Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is yjgQ [C]

Identifier: 197119770

GI number: 197119770

Start: 3924879

End: 3925961

Strand: Direct

Name: yjgQ [C]

Synonym: Gbem_3408

Alternate gene names: 197119770

Gene position: 3924879-3925961 (Clockwise)

Preceding gene: 197119769

Following gene: 197119771

Centisome position: 85.04

GC content: 61.4

Gene sequence:

>1083_bases
ATGAACATCCTCACCCGCTACATCGCCCGGGCCTATGTAAAGATGCTCTCGCTCTGCCTCGGCTCCTTCATCGCCATCTA
CCTGGTGGTGGACTTCATGGAGAAGGTCTCCCGCTTCACGCGCTACGGCGCGAGTTGGAAGCACCTGGCCCTCTTCTTCA
TCACCAAGATCCCGGAGATGATCATCGATGCGGCGCCCCTTGCCGTCCTGATGGCGACGCTGCTCACCCTCGGGACCCTC
TCCCTTACTTCGGAGCTCACCGCCATCCGCAGCTGCGGGGTGAGCCTCTTCCGGATCAGCCTCCCCATCCTGGTCATCTC
CGTCCTCATGAGCCTCGGAGTGCTGGCGATAGGGGAGTTTGTGCTTCCCAAAACTTATGCGCAACGCACCTACATCCAGG
AGGTGCTGATCCAGAAGAAAAGCCCCAGCGCCTTTTTCCGGCAGCAGAACATCTGGTTTAGGGAGGAAGGGACGGTGCTC
AGGGCTAGCCTTTTCGAGCCGGCGAGAAACGAGCTGAAAGGGATCACCCTGTGGGAGCTGCAGCCAGGGACGGGGGAACC
GCTCAAGCGCACCGAAGCCGACCTCGCGATCCTGGGAGCTAAGGGATGGATGTTCCGGGACGCGGTGGTGCGGCAGTTCA
GGGATGGTGAGGTGAGTTCCACGCAGAAGTACCGGGAGCTGCCGGTAGAGCTCCAGCTAAAGCCCGCCGACCTGAAGACG
CTGGGGAAATTTTCGGACAGCATGTCCCTTGTGGAGCTGAGCCGCTACTGCAGGAAGCTAAGAGCCAGCGGCTACGACCC
CACCAGGTACGTGACCCAGATGCACAGCAGGATCTCCATGCCCTTCGGCTGCGCCGTGATGGCCTTTCTGGGTATCCCGT
TTGCGCTGCGCGGGGGAAGGTCGAGCGGCATCGCCTTCGGAGTCGGCCTCTCCATCGGGGTCGGCTTCCTCTACGTCATC
GTCAACTCGGTGATCATCTCGGTGGGACAGGTGGGGCTATTGCCGCCGGTGGTGGCGGCTTGGGCGACGAACTTCATCTT
CTTCGTGGCGGGTGCGTGGCTGTCGCTGACGATTGACAACTGA

Upstream 100 bases:

>100_bases
TGTTCAAGAAGACCTCCGACGAGGAGCGTCTCCCCATCTTCTCTCTTTACCCGCGCCTCAAGGAGGCGTTGCGGGGACGC
CTTAGCAAGGGGAGGAAGCG

Downstream 100 bases:

>100_bases
CAAGCGGGAATCGACAATGTTTGGGTGTAGTTAGATCGACTCAATGGAGGGTCGCATGCTTCGCAAACTGTTTTTCCTAC
TGCTGGTCCCCTTGCTCTTC

Product: membrane protein

Products: NA

Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; Permease YjgP; YjgP/YjgQ Family Permease; Permease Inner Membrane Protein YjgQ; Permease Yjgp/Yjgq Family Protein; Integral Membrane Protein; YjgP/YjgQ Permease

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRYGASWKHLALFFITKIPEMIIDAAPLAVLMATLLTLGTL
SLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEFVLPKTYAQRTYIQEVLIQKKSPSAFFRQQNIWFREEGTVL
RASLFEPARNELKGITLWELQPGTGEPLKRTEADLAILGAKGWMFRDAVVRQFRDGEVSSTQKYRELPVELQLKPADLKT
LGKFSDSMSLVELSRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGGRSSGIAFGVGLSIGVGFLYVI
VNSVIISVGQVGLLPPVVAAWATNFIFFVAGAWLSLTIDN

Sequences:

>Translated_360_residues
MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRYGASWKHLALFFITKIPEMIIDAAPLAVLMATLLTLGTL
SLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEFVLPKTYAQRTYIQEVLIQKKSPSAFFRQQNIWFREEGTVL
RASLFEPARNELKGITLWELQPGTGEPLKRTEADLAILGAKGWMFRDAVVRQFRDGEVSSTQKYRELPVELQLKPADLKT
LGKFSDSMSLVELSRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGGRSSGIAFGVGLSIGVGFLYVI
VNSVIISVGQVGLLPPVVAAWATNFIFFVAGAWLSLTIDN
>Mature_360_residues
MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRYGASWKHLALFFITKIPEMIIDAAPLAVLMATLLTLGTL
SLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEFVLPKTYAQRTYIQEVLIQKKSPSAFFRQQNIWFREEGTVL
RASLFEPARNELKGITLWELQPGTGEPLKRTEADLAILGAKGWMFRDAVVRQFRDGEVSSTQKYRELPVELQLKPADLKT
LGKFSDSMSLVELSRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGGRSSGIAFGVGLSIGVGFLYVI
VNSVIISVGQVGLLPPVVAAWATNFIFFVAGAWLSLTIDN

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39935; Mature: 39935

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRYGASWKHLALFFITKIPEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IIDAAPLAVLMATLLTLGTLSLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEF
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLPKTYAQRTYIQEVLIQKKSPSAFFRQQNIWFREEGTVLRASLFEPARNELKGITLWEL
HCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCEEHHHHHHHHHHHCCCCEEEEE
QPGTGEPLKRTEADLAILGAKGWMFRDAVVRQFRDGEVSSTQKYRELPVELQLKPADLKT
CCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCHHHH
LGKFSDSMSLVELSRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGGR
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCC
SSGIAFGVGLSIGVGFLYVIVNSVIISVGQVGLLPPVVAAWATNFIFFVAGAWLSLTIDN
CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRYGASWKHLALFFITKIPEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IIDAAPLAVLMATLLTLGTLSLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEF
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLPKTYAQRTYIQEVLIQKKSPSAFFRQQNIWFREEGTVLRASLFEPARNELKGITLWEL
HCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCEEHHHHHHHHHHHCCCCEEEEE
QPGTGEPLKRTEADLAILGAKGWMFRDAVVRQFRDGEVSSTQKYRELPVELQLKPADLKT
CCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCHHHH
LGKFSDSMSLVELSRYCRKLRASGYDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGGR
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCC
SSGIAFGVGLSIGVGFLYVIVNSVIISVGQVGLLPPVVAAWATNFIFFVAGAWLSLTIDN
CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA