Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119752

Identifier: 197119752

GI number: 197119752

Start: 3895887

End: 3896150

Strand: Direct

Name: 197119752

Synonym: Gbem_3388

Alternate gene names: NA

Gene position: 3895887-3896150 (Clockwise)

Preceding gene: 197119751

Following gene: 197119758

Centisome position: 84.42

GC content: 54.92

Gene sequence:

>264_bases
ATGGAGTTCTTCACCGTCTCCTGTCTGCGCAAGGGAAGAGTCTCAGTCGACGGACTGTACCAGGGGGAAAACAAAACCGG
CGGGACACTGAAGGTTTTCCAGTGCCGCGCCGGTCTGCATGACGTTTCTTTAGAATGTAAGATCGGGCAGAAATGCCGGG
AGATGACACAACGTGTGCTTATATCCGGGACCAACGCCATCGTCCCACTGGTAATCGGGTTCGTCTGCGAGGTCCGGGAC
GGATCGGACCAGAAACGTCATTAA

Upstream 100 bases:

>100_bases
CCAGCCCAGCCCAGCCCCCGGTTTCTCCCCTTGCACTCTTGCCCCACAAGGCAATACTGGAAGCTTAATTTTTTCCAACA
CACTGCTCAAGGGAGTGACC

Downstream 100 bases:

>100_bases
AGTTTCACTGTGCAGTCTTTAAAATCTCCAGCAGGAAGTTCCAGAAATTTGCGACGCTGTCTATGTACACCTTCTCTTCC
GGGGAGTGCACCTTTTCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MEFFTVSCLRKGRVSVDGLYQGENKTGGTLKVFQCRAGLHDVSLECKIGQKCREMTQRVLISGTNAIVPLVIGFVCEVRD
GSDQKRH

Sequences:

>Translated_87_residues
MEFFTVSCLRKGRVSVDGLYQGENKTGGTLKVFQCRAGLHDVSLECKIGQKCREMTQRVLISGTNAIVPLVIGFVCEVRD
GSDQKRH
>Mature_87_residues
MEFFTVSCLRKGRVSVDGLYQGENKTGGTLKVFQCRAGLHDVSLECKIGQKCREMTQRVLISGTNAIVPLVIGFVCEVRD
GSDQKRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9646; Mature: 9646

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFTVSCLRKGRVSVDGLYQGENKTGGTLKVFQCRAGLHDVSLECKIGQKCREMTQRVL
CCEEEEEHHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHH
ISGTNAIVPLVIGFVCEVRDGSDQKRH
HCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEFFTVSCLRKGRVSVDGLYQGENKTGGTLKVFQCRAGLHDVSLECKIGQKCREMTQRVL
CCEEEEEHHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHH
ISGTNAIVPLVIGFVCEVRDGSDQKRH
HCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA