| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119752
Identifier: 197119752
GI number: 197119752
Start: 3895887
End: 3896150
Strand: Direct
Name: 197119752
Synonym: Gbem_3388
Alternate gene names: NA
Gene position: 3895887-3896150 (Clockwise)
Preceding gene: 197119751
Following gene: 197119758
Centisome position: 84.42
GC content: 54.92
Gene sequence:
>264_bases ATGGAGTTCTTCACCGTCTCCTGTCTGCGCAAGGGAAGAGTCTCAGTCGACGGACTGTACCAGGGGGAAAACAAAACCGG CGGGACACTGAAGGTTTTCCAGTGCCGCGCCGGTCTGCATGACGTTTCTTTAGAATGTAAGATCGGGCAGAAATGCCGGG AGATGACACAACGTGTGCTTATATCCGGGACCAACGCCATCGTCCCACTGGTAATCGGGTTCGTCTGCGAGGTCCGGGAC GGATCGGACCAGAAACGTCATTAA
Upstream 100 bases:
>100_bases CCAGCCCAGCCCAGCCCCCGGTTTCTCCCCTTGCACTCTTGCCCCACAAGGCAATACTGGAAGCTTAATTTTTTCCAACA CACTGCTCAAGGGAGTGACC
Downstream 100 bases:
>100_bases AGTTTCACTGTGCAGTCTTTAAAATCTCCAGCAGGAAGTTCCAGAAATTTGCGACGCTGTCTATGTACACCTTCTCTTCC GGGGAGTGCACCTTTTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MEFFTVSCLRKGRVSVDGLYQGENKTGGTLKVFQCRAGLHDVSLECKIGQKCREMTQRVLISGTNAIVPLVIGFVCEVRD GSDQKRH
Sequences:
>Translated_87_residues MEFFTVSCLRKGRVSVDGLYQGENKTGGTLKVFQCRAGLHDVSLECKIGQKCREMTQRVLISGTNAIVPLVIGFVCEVRD GSDQKRH >Mature_87_residues MEFFTVSCLRKGRVSVDGLYQGENKTGGTLKVFQCRAGLHDVSLECKIGQKCREMTQRVLISGTNAIVPLVIGFVCEVRD GSDQKRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9646; Mature: 9646
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFFTVSCLRKGRVSVDGLYQGENKTGGTLKVFQCRAGLHDVSLECKIGQKCREMTQRVL CCEEEEEHHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHH ISGTNAIVPLVIGFVCEVRDGSDQKRH HCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MEFFTVSCLRKGRVSVDGLYQGENKTGGTLKVFQCRAGLHDVSLECKIGQKCREMTQRVL CCEEEEEHHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHH ISGTNAIVPLVIGFVCEVRDGSDQKRH HCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA