| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yieF [H]
Identifier: 197119731
GI number: 197119731
Start: 3870273
End: 3870827
Strand: Direct
Name: yieF [H]
Synonym: Gbem_3367
Alternate gene names: 197119731
Gene position: 3870273-3870827 (Clockwise)
Preceding gene: 197119730
Following gene: 197119735
Centisome position: 83.86
GC content: 60.0
Gene sequence:
>555_bases ATGAGCCAGTACCAGATAGCAATTATTGTAGGAAGCCTTCGCAAGGACTCGATCAACAGAAAGCTTGCCCAGGCGCTCAT AAAGTTGGGGCCGAGCGAGTTCTCTTTCAAGCAACTGGAGATAGGCGACCTGCCGCTGTACAACCAGGACCAAGACGCAA ACCAGGCTGCATCCGTCGTCCGGCTCAAAAACGAGGTCAGGGCCGCCTCGGGCGTCATCTTCGTCACCCCTGAATACAAC CGCTCGATCCCTGGGGTTCTGAAGAACGCCATCGACAACGCCTCGCGCCCGTATGGGGACAGCGCCTGGACCGGCAAACC CGCCGGGGTGTTGGGAGCGTCCATCGGGACCATCGGTACCGCGTTGGCGCAACAGCACCTGCGCAACTGCCTGGCCTACC TCGACGCCCCCACGATGGGACAGCCGGAGGTGTTCATCCAGGTAAAGGAAGGCTTCTTCGACGAGGCAGGCAACATCACC AGCGCGGACACCGTTCGTTTCCTGCAGGGGTGGATGGATCGATACGTGCTTTGGGTGAAGCGCCACGCCGAATAG
Upstream 100 bases:
>100_bases CTTTGTAGGGAAGGCGGTTGGGTAGCATTTCGATCTGGAACTGGTATAGTCGTATCTTCTGCAACAAACGCATAGACTAT AACGATAAGAGGAGACAGAC
Downstream 100 bases:
>100_bases GCATGACGATCCTGGAGCACAAAGAAATGAAGGGGCGGCACCTTGCGGTGTGCGCCCCTTTTTGCGTGCTAGGGATGGAT CGGTTGGAAACCGAGCCGGA
Product: NADPH-dependent FMN reductase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSQYQIAIIVGSLRKDSINRKLAQALIKLGPSEFSFKQLEIGDLPLYNQDQDANQAASVVRLKNEVRAASGVIFVTPEYN RSIPGVLKNAIDNASRPYGDSAWTGKPAGVLGASIGTIGTALAQQHLRNCLAYLDAPTMGQPEVFIQVKEGFFDEAGNIT SADTVRFLQGWMDRYVLWVKRHAE
Sequences:
>Translated_184_residues MSQYQIAIIVGSLRKDSINRKLAQALIKLGPSEFSFKQLEIGDLPLYNQDQDANQAASVVRLKNEVRAASGVIFVTPEYN RSIPGVLKNAIDNASRPYGDSAWTGKPAGVLGASIGTIGTALAQQHLRNCLAYLDAPTMGQPEVFIQVKEGFFDEAGNIT SADTVRFLQGWMDRYVLWVKRHAE >Mature_183_residues SQYQIAIIVGSLRKDSINRKLAQALIKLGPSEFSFKQLEIGDLPLYNQDQDANQAASVVRLKNEVRAASGVIFVTPEYNR SIPGVLKNAIDNASRPYGDSAWTGKPAGVLGASIGTIGTALAQQHLRNCLAYLDAPTMGQPEVFIQVKEGFFDEAGNITS ADTVRFLQGWMDRYVLWVKRHAE
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=183, Percent_Identity=38.7978142076503, Blast_Score=117, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20198; Mature: 20067
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQYQIAIIVGSLRKDSINRKLAQALIKLGPSEFSFKQLEIGDLPLYNQDQDANQAASVV CCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHH RLKNEVRAASGVIFVTPEYNRSIPGVLKNAIDNASRPYGDSAWTGKPAGVLGASIGTIGT HHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH ALAQQHLRNCLAYLDAPTMGQPEVFIQVKEGFFDEAGNITSADTVRFLQGWMDRYVLWVK HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RHAE HCCC >Mature Secondary Structure SQYQIAIIVGSLRKDSINRKLAQALIKLGPSEFSFKQLEIGDLPLYNQDQDANQAASVV CCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHH RLKNEVRAASGVIFVTPEYNRSIPGVLKNAIDNASRPYGDSAWTGKPAGVLGASIGTIGT HHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH ALAQQHLRNCLAYLDAPTMGQPEVFIQVKEGFFDEAGNITSADTVRFLQGWMDRYVLWVK HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RHAE HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]