Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119635

Identifier: 197119635

GI number: 197119635

Start: 3761532

End: 3762362

Strand: Direct

Name: 197119635

Synonym: Gbem_3269

Alternate gene names: NA

Gene position: 3761532-3762362 (Clockwise)

Preceding gene: 197119633

Following gene: 197119645

Centisome position: 81.5

GC content: 60.77

Gene sequence:

>831_bases
ATGCCCTTATCGCTCACCATCAGGCGCCTGTTGACCAACCAGCCGATAGATCTGCCGGTCTTCCACCCGGTGGCGCTGAG
GCTGCAGCACCTCCTTGAAACCCCGGACTTCTCGATGGCCCAGGTAGTCACGCTGGCCAACGAGGATCAGTCGCTGGCGG
GACAGATCCTGAAGATGGCCAACTCCGCCATGTACATCGGGCGGGTCCGCACCGAGACCATCAAGGACGCGGTAATCAGG
CTAGGCGCCCAGCAGGTGTGCAACCTGGCGATGGCGGCTTCGCAGGCAGGGCTCCATGTATCGGACAACCGCGTCATCAA
CGGATTCATGCAGTCGCTTTGGCTGCACAGCCATGCCTGCGCCATGGGAAGCCGCTGGCTGGCCCGCAGCGCCGGCTATC
CGCAGCACGCGGACCAGGCGTACATGGGGGGGCTTTTACACGACATCGGGAAGCTCTACCTGCTGAAAGCACTAGAGCGG
CTGAACCAGTCGGGTGTGGCGCAAGCCGCGCTGGAGGATGACCTGCTTTTGGAGATTTTCGAGGAACTGCACGTGGAGCA
GGGGTGCCGCCTGATGGAGCACTGGAACATGCCGAAGGTGTACTACAACGTAGTGGCCAACCATCACGACGAGAATTTCG
AGACCACGGACATCGTGTTGACGGCGGTGCGGCTGGTGAACAAGGCATGCAAGCTGAAGGGAATCGGGCTTGTCGTCGAC
CCGACCATCGATCTCGAAAGCGAGCCGGAAGCCGCGCTTTTGCAGTTGACGCCGGAAGAGATAGACGAGCTCATGGAAGT
CCTGGACGATTCCCAAGAGCTGTCGCTGTAA

Upstream 100 bases:

>100_bases
GATCAGAAAGTTCCGGCTACACAACAGTTTGCTGTTGTTATCTTTCCGGCACTTGCTTTAAACTGTCGAGTGGCTCGAAT
CCTTGCTCAGGAGAACCGCT

Downstream 100 bases:

>100_bases
GGGGAAGACGATTTGCAGCCCCCAGCCCCCAGCCCCCAGCCCCTAGCCCCCAGCCCCCAGCCCCTAGCCCCTAGCCCCTA
GCCCCTAGCCCCCAGCCCCT

Product: metal-dependent phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MPLSLTIRRLLTNQPIDLPVFHPVALRLQHLLETPDFSMAQVVTLANEDQSLAGQILKMANSAMYIGRVRTETIKDAVIR
LGAQQVCNLAMAASQAGLHVSDNRVINGFMQSLWLHSHACAMGSRWLARSAGYPQHADQAYMGGLLHDIGKLYLLKALER
LNQSGVAQAALEDDLLLEIFEELHVEQGCRLMEHWNMPKVYYNVVANHHDENFETTDIVLTAVRLVNKACKLKGIGLVVD
PTIDLESEPEAALLQLTPEEIDELMEVLDDSQELSL

Sequences:

>Translated_276_residues
MPLSLTIRRLLTNQPIDLPVFHPVALRLQHLLETPDFSMAQVVTLANEDQSLAGQILKMANSAMYIGRVRTETIKDAVIR
LGAQQVCNLAMAASQAGLHVSDNRVINGFMQSLWLHSHACAMGSRWLARSAGYPQHADQAYMGGLLHDIGKLYLLKALER
LNQSGVAQAALEDDLLLEIFEELHVEQGCRLMEHWNMPKVYYNVVANHHDENFETTDIVLTAVRLVNKACKLKGIGLVVD
PTIDLESEPEAALLQLTPEEIDELMEVLDDSQELSL
>Mature_275_residues
PLSLTIRRLLTNQPIDLPVFHPVALRLQHLLETPDFSMAQVVTLANEDQSLAGQILKMANSAMYIGRVRTETIKDAVIRL
GAQQVCNLAMAASQAGLHVSDNRVINGFMQSLWLHSHACAMGSRWLARSAGYPQHADQAYMGGLLHDIGKLYLLKALERL
NQSGVAQAALEDDLLLEIFEELHVEQGCRLMEHWNMPKVYYNVVANHHDENFETTDIVLTAVRLVNKACKLKGIGLVVDP
TIDLESEPEAALLQLTPEEIDELMEVLDDSQELSL

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 30739; Mature: 30608

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSLTIRRLLTNQPIDLPVFHPVALRLQHLLETPDFSMAQVVTLANEDQSLAGQILKMA
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHH
NSAMYIGRVRTETIKDAVIRLGAQQVCNLAMAASQAGLHVSDNRVINGFMQSLWLHSHAC
CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
AMGSRWLARSAGYPQHADQAYMGGLLHDIGKLYLLKALERLNQSGVAQAALEDDLLLEIF
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EELHVEQGCRLMEHWNMPKVYYNVVANHHDENFETTDIVLTAVRLVNKACKLKGIGLVVD
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEC
PTIDLESEPEAALLQLTPEEIDELMEVLDDSQELSL
CCCCCCCCCCHHEEEECHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
PLSLTIRRLLTNQPIDLPVFHPVALRLQHLLETPDFSMAQVVTLANEDQSLAGQILKMA
CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHH
NSAMYIGRVRTETIKDAVIRLGAQQVCNLAMAASQAGLHVSDNRVINGFMQSLWLHSHAC
CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
AMGSRWLARSAGYPQHADQAYMGGLLHDIGKLYLLKALERLNQSGVAQAALEDDLLLEIF
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EELHVEQGCRLMEHWNMPKVYYNVVANHHDENFETTDIVLTAVRLVNKACKLKGIGLVVD
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEC
PTIDLESEPEAALLQLTPEEIDELMEVLDDSQELSL
CCCCCCCCCCHHEEEECHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]