| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119601
Identifier: 197119601
GI number: 197119601
Start: 3727025
End: 3727468
Strand: Direct
Name: 197119601
Synonym: Gbem_3235
Alternate gene names: NA
Gene position: 3727025-3727468 (Clockwise)
Preceding gene: 308535356
Following gene: 197119603
Centisome position: 80.76
GC content: 54.28
Gene sequence:
>444_bases ATGAAAAAAGTAACCCTGTTGTTCGCCATGGCACTGTCAGCCGCTGTTGTTTTCAGTGCACCGCCCCAAGCCACAGCCGC GCAGGACTCCAGCGCCACCAAAGCCGACAACTCGAAGAAGAACAAGGAAGCGAGCAAGGGAGTCACCGCCGACCAGCAGA AGGAAAACAAGCCCGACCGGGAGACCACCAGGCAGATCAGAAGGGCCGTGGTCAAGGACAAATCCCTTTCGATCAAGGCT CACAATGTGAAGATCATTACCACCAACGGCAAGGTCACGCTGAAGGGACCGGTAAAATCGGAATCGGAGAAAACGACCAT AGAGAAGATTGCCGAAGGGATCGTCGGCAAGGGGAACATAACCAACGAGATCGAAGTCGCGCCGCCGACGGATAAAGGCA AGGAGAAGGAAAAGGGCAAGAGCGACAAAGAGAAAGGGAAATAG
Upstream 100 bases:
>100_bases AAACGCTGAGAGAAACAGGACGCATTGATTGCGGCAAAGCCCAACAGCAAGATCACAAGGGAATAATCCCTATCAACCGG AAAAGGAGGCAAACCAAGAC
Downstream 100 bases:
>100_bases AAGCCCCAGGAGAAAGGCCCCCTTTTTTCGGGCCAAAGGATCAAAAAAGGCTAGACCGCTTGAAGCGGTTTAGCCTTTTT GTATCTGGAAAATGTGTGGC
Product: phospholipid-binding protein
Products: NA
Alternate protein names: Hyperosmotically Inducible Periplasmic Protein
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKKVTLLFAMALSAAVVFSAPPQATAAQDSSATKADNSKKNKEASKGVTADQQKENKPDRETTRQIRRAVVKDKSLSIKA HNVKIITTNGKVTLKGPVKSESEKTTIEKIAEGIVGKGNITNEIEVAPPTDKGKEKEKGKSDKEKGK
Sequences:
>Translated_147_residues MKKVTLLFAMALSAAVVFSAPPQATAAQDSSATKADNSKKNKEASKGVTADQQKENKPDRETTRQIRRAVVKDKSLSIKA HNVKIITTNGKVTLKGPVKSESEKTTIEKIAEGIVGKGNITNEIEVAPPTDKGKEKEKGKSDKEKGK >Mature_147_residues MKKVTLLFAMALSAAVVFSAPPQATAAQDSSATKADNSKKNKEASKGVTADQQKENKPDRETTRQIRRAVVKDKSLSIKA HNVKIITTNGKVTLKGPVKSESEKTTIEKIAEGIVGKGNITNEIEVAPPTDKGKEKEKGKSDKEKGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15772; Mature: 15772
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVTLLFAMALSAAVVFSAPPQATAAQDSSATKADNSKKNKEASKGVTADQQKENKPDR CCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCCH ETTRQIRRAVVKDKSLSIKAHNVKIITTNGKVTLKGPVKSESEKTTIEKIAEGIVGKGNI HHHHHHHHHHHCCCCCEEEECCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHCCCCCCC TNEIEVAPPTDKGKEKEKGKSDKEKGK CCEEEECCCCCCCCCHHCCCCCCCCCC >Mature Secondary Structure MKKVTLLFAMALSAAVVFSAPPQATAAQDSSATKADNSKKNKEASKGVTADQQKENKPDR CCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCCH ETTRQIRRAVVKDKSLSIKAHNVKIITTNGKVTLKGPVKSESEKTTIEKIAEGIVGKGNI HHHHHHHHHHHCCCCCEEEECCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHCCCCCCC TNEIEVAPPTDKGKEKEKGKSDKEKGK CCEEEECCCCCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA