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The map label for this gene is nrfD [C]

Identifier: 197119566

GI number: 197119566

Start: 3685381

End: 3686619

Strand: Direct

Name: nrfD [C]

Synonym: Gbem_3196

Alternate gene names: 197119566

Gene position: 3685381-3686619 (Clockwise)

Preceding gene: 197119565

Following gene: 308535355

Centisome position: 79.85

GC content: 61.42

Gene sequence:

>1239_bases
ATGATGGTGCACGGAGAAGCCTGGACCCTCAAAGAATTCTTCACCTACCCCAACGAGTACATCTACTGGACCATCCAGAT
CGTGATGTATCCCTTCATGACCGGCCTCGTGGCCGGGGCCTTCGTGCTCTCCTCGCTGTACCACGTCTTCGGCGTGAAAC
AGCTGAAAGGGATCGCGCGCTTTTCGCTGGTCTTTTCCTTCGCGCTGCTGCCGGTCGCCATGCTACCGCTCATGCTGCAC
CTGCAGCAGCCGCTAAGGGGTATCGAGGTGATGCTGACGCCTCATTTCACCTCGGCCATCGCCGCCTTCGGCATCGTCTT
CACCACCTACGGCATGATCGTCGCCTCCGAGCTCTGGTTCGTCTACCGCAAGCACTTCGTCGAAACAGCGCTGGCCTTGA
AGGCTAAAGAGCGGCGCGGCGCGGGCGAGCAGTTCGCCTGTCTCCTTTTCTCCGCGCTCACCATGGGCGCCTACGACGTG
AGCCACGAGGCGCTGGAGGCGGACGAGCGGGCGGTGAAGAAGCTTGCCGCCGCCGGGATTCCCGTCGCCTGCTTCCTGCA
CGGCTACGCCGGATTCATCTTCGGCTCGGTGAAGGCGAACGCCCTTTGGATGACGCCGCTCATGCCGGTCATCTTCATCT
GCTCCGCGGTGGTTTCGGGGATTGCGCTCTGCATCCTGACCTACATCGTCACCATGGAGATCAGGAAGGCGCTGGCGGCC
AGGCGTCCCGAACTCCCCAGCAAGGAGGAGCTGAAGAGCGCCGAGAGTCAGGTAGTGGTGATGACCTCGCGCTACCTGCT
CATGTTCATGGTCGCAGCCATCACGCTGGAGCTGCTCGACTTGGTCTTCAGGGGGTACACGGCTGTGAAATCATGGGACA
TCCTGAGAAGCGTCATCTACGAGCGGGATTTCGTGAACATCTTCGTGGTGCAGTACGGGCTGGGGAACCTGGTCCCACTG
GTGCTGTTCCTCGTCCCGGGGCTCACCATCCGGCGCGCCATCCTGGGGACGGCGCTGGTGCTACTCGGGGTTTTCATGAT
GCGCTGGAACGTGGTCATCGGCGGCCAGGCCTTCTCCTCGTCCTTCTCGGGCTTCATGCACTACACCCTGCCCATCTGGC
CCGACAGCATGGAAACCTTCAAGGAAGGGCTAGGCGGCGCACTCTTGGTGGCCGTGGTCCCCTTCTGCCTGTTCTGGATC
CTGAACAAGGTGATGCCCGTCTTCAAGGAGACGCACTAA

Upstream 100 bases:

>100_bases
CCAAGGTGATCATGACCGAGCGGGTCAACGTCCTCAAAGAGGAGTACGGCACCAAGCCGCAGGTCTTCTACCTGGGGCTT
TCCAAGGAGGTGAAGTAGCC

Downstream 100 bases:

>100_bases
TTGGAGAAGAGTCCCCCCCTCCCGCAAGGGGAGGGGAACCTGGAGCGGCTCTCCCTGATATTTTCCGATGAACCTTTGCG
AAGGGGGGACAGGGGGGATT

Product: oxidoreductase membrane subunit

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: Molybdopterin Oxidoreductase Membrane Subunit; Oxidoreductase Membrane Subunit; Polysulphide Reductase Nrfd

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MMVHGEAWTLKEFFTYPNEYIYWTIQIVMYPFMTGLVAGAFVLSSLYHVFGVKQLKGIARFSLVFSFALLPVAMLPLMLH
LQQPLRGIEVMLTPHFTSAIAAFGIVFTTYGMIVASELWFVYRKHFVETALALKAKERRGAGEQFACLLFSALTMGAYDV
SHEALEADERAVKKLAAAGIPVACFLHGYAGFIFGSVKANALWMTPLMPVIFICSAVVSGIALCILTYIVTMEIRKALAA
RRPELPSKEELKSAESQVVVMTSRYLLMFMVAAITLELLDLVFRGYTAVKSWDILRSVIYERDFVNIFVVQYGLGNLVPL
VLFLVPGLTIRRAILGTALVLLGVFMMRWNVVIGGQAFSSSFSGFMHYTLPIWPDSMETFKEGLGGALLVAVVPFCLFWI
LNKVMPVFKETH

Sequences:

>Translated_412_residues
MMVHGEAWTLKEFFTYPNEYIYWTIQIVMYPFMTGLVAGAFVLSSLYHVFGVKQLKGIARFSLVFSFALLPVAMLPLMLH
LQQPLRGIEVMLTPHFTSAIAAFGIVFTTYGMIVASELWFVYRKHFVETALALKAKERRGAGEQFACLLFSALTMGAYDV
SHEALEADERAVKKLAAAGIPVACFLHGYAGFIFGSVKANALWMTPLMPVIFICSAVVSGIALCILTYIVTMEIRKALAA
RRPELPSKEELKSAESQVVVMTSRYLLMFMVAAITLELLDLVFRGYTAVKSWDILRSVIYERDFVNIFVVQYGLGNLVPL
VLFLVPGLTIRRAILGTALVLLGVFMMRWNVVIGGQAFSSSFSGFMHYTLPIWPDSMETFKEGLGGALLVAVVPFCLFWI
LNKVMPVFKETH
>Mature_412_residues
MMVHGEAWTLKEFFTYPNEYIYWTIQIVMYPFMTGLVAGAFVLSSLYHVFGVKQLKGIARFSLVFSFALLPVAMLPLMLH
LQQPLRGIEVMLTPHFTSAIAAFGIVFTTYGMIVASELWFVYRKHFVETALALKAKERRGAGEQFACLLFSALTMGAYDV
SHEALEADERAVKKLAAAGIPVACFLHGYAGFIFGSVKANALWMTPLMPVIFICSAVVSGIALCILTYIVTMEIRKALAA
RRPELPSKEELKSAESQVVVMTSRYLLMFMVAAITLELLDLVFRGYTAVKSWDILRSVIYERDFVNIFVVQYGLGNLVPL
VLFLVPGLTIRRAILGTALVLLGVFMMRWNVVIGGQAFSSSFSGFMHYTLPIWPDSMETFKEGLGGALLVAVVPFCLFWI
LNKVMPVFKETH

Specific function: Probably Involved In The Transfer Of Electrons From The Quinone Pool To The Type-C Cytochromes. [C]

COG id: COG4881

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45992; Mature: 45992

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVHGEAWTLKEFFTYPNEYIYWTIQIVMYPFMTGLVAGAFVLSSLYHVFGVKQLKGIAR
CEECCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSLVFSFALLPVAMLPLMLHLQQPLRGIEVMLTPHFTSAIAAFGIVFTTYGMIVASELWF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
VYRKHFVETALALKAKERRGAGEQFACLLFSALTMGAYDVSHEALEADERAVKKLAAAGI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVACFLHGYAGFIFGSVKANALWMTPLMPVIFICSAVVSGIALCILTYIVTMEIRKALAA
HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRPELPSKEELKSAESQVVVMTSRYLLMFMVAAITLELLDLVFRGYTAVKSWDILRSVIY
CCCCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERDFVNIFVVQYGLGNLVPLVLFLVPGLTIRRAILGTALVLLGVFMMRWNVVIGGQAFSS
HCCHHHHHEEHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHH
SFSGFMHYTLPIWPDSMETFKEGLGGALLVAVVPFCLFWILNKVMPVFKETH
HCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA