| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is murB-2 [H]
Identifier: 197119550
GI number: 197119550
Start: 3668009
End: 3668992
Strand: Direct
Name: murB-2 [H]
Synonym: Gbem_3180
Alternate gene names: 197119550
Gene position: 3668009-3668992 (Clockwise)
Preceding gene: 197119549
Following gene: 197119564
Centisome position: 79.48
GC content: 65.96
Gene sequence:
>984_bases ATGTATACCGACCAGAGAAAAGACAACCAGCCGTTAGAGCTTTCGCGGGACATCCCCCTCGCCCCCTTCACCTCGTTCAA GATCGGTGGCCCGGCCAGGTTTTTGACCAAGGCCCGGACGCTGGAACAGCTGAAGCAGGCGCTTTCCTTCGCTAAGGCAG AAGGGATTCCCTTCCTCATCGTCGGGGGTGGATCCAACCTGCTGGTGAGCGACCGCGGTTTCGACGGCATCGCGATCAGG CTGCAGATGAAAGGGATCAAGGTCCAAGGGAACCGGGTCGAGGCGCAGGCGGGAGTCGACCTCATGGCGCTGGTGGAGCA TGCGGCACACTGGGGGCTGGCGGGGATCGAGCGGCTGGCTGGCATTCCGGGGCTCTTCGGGGGGGCGGTGCGCGGCAATG CGGGCGCCTACGGCAGTTGCATCGGCGACGTGATCGAGAGGGTCCACGCGCTGCGGGCGGACACCCTGGAACTGGTCACG CTCGCGCGGGACGCCTGCCAGTTCCAGTACCGCAACAGCCGTTTTAAGAAGGACCACGGGCTGGTGGTGGTGGCGGCGAG CCTGCTCCTTGAGCCGGGGGCCCCCCAGGAGATCCTGAGCCGGGCGGAGGCGACGGTGAGAAAACGGCAAGCCCGCCAGC TGCAATGCGACCTGAGCGCAGGCTCGTTCTTCATGAATCCGGTGGTGCGCGACCCCGAGCTGATCCAAAGGTTCGAGACC GAGCAGGGGACCCACTGCAGGGACGGCAGGATCCCGGCCGGATGGCTCATCGACAGGGCCAGGCTGCGCAGCCTTTCCGT GGGAGCGGCCATGGTCAGCCCAAGGCACGCCAATTACCTGATCAACACCGGCAACGCCAGCGCCCAGGAGATGGTCAGGC TCGCCGAACTGGTGAAGGACGAGGTGCGGGCGTCGCTGGGGGTGCAGCTGGAGGAGGAGGTGAGCTGCGTCGGCTTCATT CCGGCTGGGCCGCTTCCCTCCTGA
Upstream 100 bases:
>100_bases CTTGTCAACACCTCAGCTCTTATCGCCACCCGCCGGCGCTACTTGAGCTGAAAATGCCCCTTCGTTGGCTTGAGCGTAAA CTGTTGCTATTATAGGGCCT
Downstream 100 bases:
>100_bases ACTCGGCGAACGCCTCCTCGAGATCCTGGTAAAGCCCCGTCATCCCCTCAAGCTCTTCCTGCTGCGCTGTCTTTTTCTCC ATCTCGAACGCAATTATCCG
Product: UDP-N-acetylenolpyruvylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MYTDQRKDNQPLELSRDIPLAPFTSFKIGGPARFLTKARTLEQLKQALSFAKAEGIPFLIVGGGSNLLVSDRGFDGIAIR LQMKGIKVQGNRVEAQAGVDLMALVEHAAHWGLAGIERLAGIPGLFGGAVRGNAGAYGSCIGDVIERVHALRADTLELVT LARDACQFQYRNSRFKKDHGLVVVAASLLLEPGAPQEILSRAEATVRKRQARQLQCDLSAGSFFMNPVVRDPELIQRFET EQGTHCRDGRIPAGWLIDRARLRSLSVGAAMVSPRHANYLINTGNASAQEMVRLAELVKDEVRASLGVQLEEEVSCVGFI PAGPLPS
Sequences:
>Translated_327_residues MYTDQRKDNQPLELSRDIPLAPFTSFKIGGPARFLTKARTLEQLKQALSFAKAEGIPFLIVGGGSNLLVSDRGFDGIAIR LQMKGIKVQGNRVEAQAGVDLMALVEHAAHWGLAGIERLAGIPGLFGGAVRGNAGAYGSCIGDVIERVHALRADTLELVT LARDACQFQYRNSRFKKDHGLVVVAASLLLEPGAPQEILSRAEATVRKRQARQLQCDLSAGSFFMNPVVRDPELIQRFET EQGTHCRDGRIPAGWLIDRARLRSLSVGAAMVSPRHANYLINTGNASAQEMVRLAELVKDEVRASLGVQLEEEVSCVGFI PAGPLPS >Mature_327_residues MYTDQRKDNQPLELSRDIPLAPFTSFKIGGPARFLTKARTLEQLKQALSFAKAEGIPFLIVGGGSNLLVSDRGFDGIAIR LQMKGIKVQGNRVEAQAGVDLMALVEHAAHWGLAGIERLAGIPGLFGGAVRGNAGAYGSCIGDVIERVHALRADTLELVT LARDACQFQYRNSRFKKDHGLVVVAASLLLEPGAPQEILSRAEATVRKRQARQLQCDLSAGSFFMNPVVRDPELIQRFET EQGTHCRDGRIPAGWLIDRARLRSLSVGAAMVSPRHANYLINTGNASAQEMVRLAELVKDEVRASLGVQLEEEVSCVGFI PAGPLPS
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790407, Length=328, Percent_Identity=32.9268292682927, Blast_Score=142, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 35431; Mature: 35431
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTDQRKDNQPLELSRDIPLAPFTSFKIGGPARFLTKARTLEQLKQALSFAKAEGIPFLI CCCCCCCCCCCCEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VGGGSNLLVSDRGFDGIAIRLQMKGIKVQGNRVEAQAGVDLMALVEHAAHWGLAGIERLA EECCCEEEEECCCCCCEEEEEEEECEEEECCEEEHHHCCHHHHHHHHHHHCCHHHHHHHC GIPGLFGGAVRGNAGAYGSCIGDVIERVHALRADTLELVTLARDACQFQYRNSRFKKDHG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LVVVAASLLLEPGAPQEILSRAEATVRKRQARQLQCDLSAGSFFMNPVVRDPELIQRFET EEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCCCCHHHHHHHHC EQGTHCRDGRIPAGWLIDRARLRSLSVGAAMVSPRHANYLINTGNASAQEMVRLAELVKD CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHH EVRASLGVQLEEEVSCVGFIPAGPLPS HHHHHHCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MYTDQRKDNQPLELSRDIPLAPFTSFKIGGPARFLTKARTLEQLKQALSFAKAEGIPFLI CCCCCCCCCCCCEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VGGGSNLLVSDRGFDGIAIRLQMKGIKVQGNRVEAQAGVDLMALVEHAAHWGLAGIERLA EECCCEEEEECCCCCCEEEEEEEECEEEECCEEEHHHCCHHHHHHHHHHHCCHHHHHHHC GIPGLFGGAVRGNAGAYGSCIGDVIERVHALRADTLELVTLARDACQFQYRNSRFKKDHG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LVVVAASLLLEPGAPQEILSRAEATVRKRQARQLQCDLSAGSFFMNPVVRDPELIQRFET EEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCCCCHHHHHHHHC EQGTHCRDGRIPAGWLIDRARLRSLSVGAAMVSPRHANYLINTGNASAQEMVRLAELVKD CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHH EVRASLGVQLEEEVSCVGFIPAGPLPS HHHHHHCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA