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The map label for this gene is ybbC [H]

Identifier: 197119549

GI number: 197119549

Start: 3666427

End: 3667761

Strand: Direct

Name: ybbC [H]

Synonym: Gbem_3179

Alternate gene names: 197119549

Gene position: 3666427-3667761 (Clockwise)

Preceding gene: 197119548

Following gene: 197119550

Centisome position: 79.44

GC content: 64.57

Gene sequence:

>1335_bases
TTGCGACTGTTTCGCGTTTTGCCCTACCTGTTGTCCCTATCACTGATGCTGACCCTTTTCTCCCCCCCCCCTTCCCAGGC
CGCACTGGTGAAAACCGGAGCGGAGGTACTCGCCGAGCAGAACTTCCTGCCGCTCAGGGGGAAGAACTTCGCCCTGGTGA
CCAATCACTCCGCCATGGTGGGGGAGGTGCACCTGCTGGACCTTATGAAAAGCAAGGGTTTACAGCCGGCGGTGATCTTT
ACCCCGGAACACGGCCTGAAAGGGACCGCCGAAGACGGGGTGCACCTGGCGGACGACTCCAGCGACGGCATCCCGGTGAT
AAGCCTCTACGGTGCGGTGAAGCAGCCCCGCCAGGAGGACCTCAAGGGAATCGACCTGATCGTCTTCGATATCCAGGATG
CGGGGGTGCGCTTCTATACCTACATCTCGACCATGGGGCTTGCCATGCAGGCTGCCGCCCGGGACGGGATTCCCTTCATG
GTGCTGGACCGCGCCAACCCGCTGGGAGGTGATTACGTCGGAGGGTTCCTGAGGGACGGGATACCGGCGAGCTTCACCTC
GCTCTACCCGATCCCGATTGCCCATGGCATGACTGTGGGCGAGCTTGCCGGCATGATTAAAGGGGAGGCGATGCTGCCGG
GACTCGCGCAACTCGACCTGAAGGTGGTGCGGATGCAGGGGTGGCAGCGCGCCATGCGCTGGCCCGACACCGGCCTTTCG
TGGGTGGCGACCAGCCCCAACCTCGCCTCGTTCGAATCCGTGCTCCTTTACCCGGGAACCGGCCTTTTGGAGGGGACCAG
CGCCTCCGAGGGGCGCGGCAGCACTCTCCCCTTCCAACTGGCGGGGTGGCCCGGCATCGACCCCCTGGCGCTCGCGGCCC
GGCTGAACGGCGAACAGTTGCGGGGAATCCGTTTCGAGCCGGTGCAGTTTACGCCGGTGAGGATCCCCGGGGTATCGAGC
GTGCCCAAGTACCGGGACCGAGAGGTGAATGGGGTGAGGATCGATATCACCGACTACAGCAAGGTCTTGCCGGTGGAGAC
CGGAATCGCGGTCCTGAGCGCGCTGCACGCCTTGGTACCGGAGCCGGTGCGCCCCTCCTTCTTCAGGGCGGGGTTCGACG
ACATGGCGGGTTCGGCTGAGTTGCGCAAGGCGGTGGAGCAGGGTGAGAGCGCCGCCGGCATCTCGGCACGCTGCAACGGC
GAGCTCTCCAGGTTTCTGGCACTGCGCGAAGCGTACCTTTTGTACGGCGATGAGCCCGCTTCAACGGCCGGTGCTGCGGG
GAAGGCGACGGATGCATCCGGTTTGGCTCAAAAAGAGGGGCACCCATCGCGGTAA

Upstream 100 bases:

>100_bases
TCAGTATTTCCATCCCAAACCGATACGATACCCCAGGACAGGTTCCGCTGGAGTATCAGCATCGACCCCGTTCAATTGAC
CCATAAGGCGGTACTTAGAG

Downstream 100 bases:

>100_bases
AGCGATGCGTGCCCCAAGTGCGCCATCTGATAGGTATCGGCCGCCAGAGCGCACCATATAAGAGGAGCTGCAGGATGGCG
GAGCGCTGCCGTTCTGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MRLFRVLPYLLSLSLMLTLFSPPPSQAALVKTGAEVLAEQNFLPLRGKNFALVTNHSAMVGEVHLLDLMKSKGLQPAVIF
TPEHGLKGTAEDGVHLADDSSDGIPVISLYGAVKQPRQEDLKGIDLIVFDIQDAGVRFYTYISTMGLAMQAAARDGIPFM
VLDRANPLGGDYVGGFLRDGIPASFTSLYPIPIAHGMTVGELAGMIKGEAMLPGLAQLDLKVVRMQGWQRAMRWPDTGLS
WVATSPNLASFESVLLYPGTGLLEGTSASEGRGSTLPFQLAGWPGIDPLALAARLNGEQLRGIRFEPVQFTPVRIPGVSS
VPKYRDREVNGVRIDITDYSKVLPVETGIAVLSALHALVPEPVRPSFFRAGFDDMAGSAELRKAVEQGESAAGISARCNG
ELSRFLALREAYLLYGDEPASTAGAAGKATDASGLAQKEGHPSR

Sequences:

>Translated_444_residues
MRLFRVLPYLLSLSLMLTLFSPPPSQAALVKTGAEVLAEQNFLPLRGKNFALVTNHSAMVGEVHLLDLMKSKGLQPAVIF
TPEHGLKGTAEDGVHLADDSSDGIPVISLYGAVKQPRQEDLKGIDLIVFDIQDAGVRFYTYISTMGLAMQAAARDGIPFM
VLDRANPLGGDYVGGFLRDGIPASFTSLYPIPIAHGMTVGELAGMIKGEAMLPGLAQLDLKVVRMQGWQRAMRWPDTGLS
WVATSPNLASFESVLLYPGTGLLEGTSASEGRGSTLPFQLAGWPGIDPLALAARLNGEQLRGIRFEPVQFTPVRIPGVSS
VPKYRDREVNGVRIDITDYSKVLPVETGIAVLSALHALVPEPVRPSFFRAGFDDMAGSAELRKAVEQGESAAGISARCNG
ELSRFLALREAYLLYGDEPASTAGAAGKATDASGLAQKEGHPSR
>Mature_444_residues
MRLFRVLPYLLSLSLMLTLFSPPPSQAALVKTGAEVLAEQNFLPLRGKNFALVTNHSAMVGEVHLLDLMKSKGLQPAVIF
TPEHGLKGTAEDGVHLADDSSDGIPVISLYGAVKQPRQEDLKGIDLIVFDIQDAGVRFYTYISTMGLAMQAAARDGIPFM
VLDRANPLGGDYVGGFLRDGIPASFTSLYPIPIAHGMTVGELAGMIKGEAMLPGLAQLDLKVVRMQGWQRAMRWPDTGLS
WVATSPNLASFESVLLYPGTGLLEGTSASEGRGSTLPFQLAGWPGIDPLALAARLNGEQLRGIRFEPVQFTPVRIPGVSS
VPKYRDREVNGVRIDITDYSKVLPVETGIAVLSALHALVPEPVRPSFFRAGFDDMAGSAELRKAVEQGESAAGISARCNG
ELSRFLALREAYLLYGDEPASTAGAAGKATDASGLAQKEGHPSR

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 47454; Mature: 47454

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFRVLPYLLSLSLMLTLFSPPPSQAALVKTGAEVLAEQNFLPLRGKNFALVTNHSAMV
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCHH
GEVHLLDLMKSKGLQPAVIFTPEHGLKGTAEDGVHLADDSSDGIPVISLYGAVKQPRQED
HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEHHHHCCCHHHC
LKGIDLIVFDIQDAGVRFYTYISTMGLAMQAAARDGIPFMVLDRANPLGGDYVGGFLRDG
CCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCC
IPASFTSLYPIPIAHGMTVGELAGMIKGEAMLPGLAQLDLKVVRMQGWQRAMRWPDTGLS
CCCHHHCCCCCHHHCCCCHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
WVATSPNLASFESVLLYPGTGLLEGTSASEGRGSTLPFQLAGWPGIDPLALAARLNGEQL
EEECCCCHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCHHH
RGIRFEPVQFTPVRIPGVSSVPKYRDREVNGVRIDITDYSKVLPVETGIAVLSALHALVP
CCEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
EPVRPSFFRAGFDDMAGSAELRKAVEQGESAAGISARCNGELSRFLALREAYLLYGDEPA
CCCCCHHHHCCHHHHCCHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHEEECCCCC
STAGAAGKATDASGLAQKEGHPSR
CCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MRLFRVLPYLLSLSLMLTLFSPPPSQAALVKTGAEVLAEQNFLPLRGKNFALVTNHSAMV
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCHH
GEVHLLDLMKSKGLQPAVIFTPEHGLKGTAEDGVHLADDSSDGIPVISLYGAVKQPRQED
HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEHHHHCCCHHHC
LKGIDLIVFDIQDAGVRFYTYISTMGLAMQAAARDGIPFMVLDRANPLGGDYVGGFLRDG
CCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCC
IPASFTSLYPIPIAHGMTVGELAGMIKGEAMLPGLAQLDLKVVRMQGWQRAMRWPDTGLS
CCCHHHCCCCCHHHCCCCHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
WVATSPNLASFESVLLYPGTGLLEGTSASEGRGSTLPFQLAGWPGIDPLALAARLNGEQL
EEECCCCHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCHHH
RGIRFEPVQFTPVRIPGVSSVPKYRDREVNGVRIDITDYSKVLPVETGIAVLSALHALVP
CCEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
EPVRPSFFRAGFDDMAGSAELRKAVEQGESAAGISARCNGELSRFLALREAYLLYGDEPA
CCCCCHHHHCCHHHHCCHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHEEECCCCC
STAGAAGKATDASGLAQKEGHPSR
CCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]