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The map label for this gene is yajR [H]

Identifier: 197119536

GI number: 197119536

Start: 3648243

End: 3649463

Strand: Direct

Name: yajR [H]

Synonym: Gbem_3166

Alternate gene names: 197119536

Gene position: 3648243-3649463 (Clockwise)

Preceding gene: 197119535

Following gene: 197119537

Centisome position: 79.05

GC content: 65.68

Gene sequence:

>1221_bases
ATGAGCGACTCTGCTACAGACAACCAGCCACACGAACAACACCAAACCCCGGGAGAGCGCCAGGCGGCACAGGTCCTGAT
CTGCTGCGCGATCGGCTTCGTCTGTTTCCTGGGCGCCTACATGCGGATTCCCGTCCTGCCGCTTCTGGCCAGCGGCATCG
GCGCCAGCACCACGCAGATCGGCCTGATCAACGCCGCCTTCATGCTTTCCGCGGGGCTTCTGGCCGTACCCTCCGGGCTG
ATATCGGACAAGGTCGGCATCACCCCGGTCCTTCTTGCCGGACTGGCGCTGATGAGCGCGGCGTCGCTACTCATCCCGCT
AAGCGGCAACTGGGTCGCACTGGGCGCCATCTACCTCGTCTTCGGCGTCGGGCTCGCCGCCTTCACCCCGACCATGATGT
CCTCGGTTGCGAGGATCGTCCCGCGCTCGCACGTCGGCCGCGCCTACAGTTGGTACACGACCGCCGTCTACCTCGCCATG
ACCATCGGCCCGGCCGCCGGCGGCTGGTTCGGGCAGAGGCTCGGGTTCAGGCAGGTCTTCCTGGTTTCCGGCGTGCTGAT
CGCCGTGGCGCTGATAGCGGTCCTTTGCTTTCTCCCCAAGGACACCCACGCCACCCACCGCACCCACGGCGAAGGCCAGC
ATCCGCCAAGCTCCATATTCTCCAACGGGCGGCTCATGGCCGCGCTCGCCGGGACCTTGGGCGGCTGTTTCGGCTTCGGC
ATGTACCTCTCCTTTCTCCCCCTGCATGCGCGCGCGGCGGGGCTGAGCGTCGACCAGATAGGAATCGTCTTCGCGGCCCA
AGCCTTGGTCAACGTCCTCTTGCGCATCCCGTTCGGGCATTTGAGCGACCGCATCGACCGCGGCGCCATGTCCGGCATCG
GCCTCGTCGTCTGCGCCGTCGCCCTCGCCCTGACCGGCGCCAGCCACACCCTCGCCGCCATGATCCTCGGCGCCTGTCTT
CTCGGGGCCGGGATGGGGACCAGTTTCACCGCGCTGAGTTCGCTGGTGGCGATCGTGATGCCTGCCGGCCAGCGCGGCCT
GGGGATGGGGCTTTACAACAGCTGCGTCTATCTGGGCATGATGCTCAGTTCCGCCACCATGGGGGTGGTGATCAAAAGGA
CCGGCTTTGCCACCGGGTTTCTGGCCGCCGGTTGCATCACCTTTGCGGCGACCTTGCTGTTTCTGCTCCTGTACCGAGGT
AGCACCTCGAAAGAAAAATAA

Upstream 100 bases:

>100_bases
CGCCGCCGCCCCGCTTACCCGCCAAAGCCCACCCTTTGCCTGCGGGGCAAGTAGTTTGTTATTGACACCCCCCGCCCTGC
GGCGCTAGTTTTGCCGGATT

Downstream 100 bases:

>100_bases
GCCCGGACGCACCTGCCCGATATCGAGCCGTTATCCCATGTGATGCTTAAATCAAAATGCAAAAGGAGAACTTCGGATGA
AAAAGACAGCCGCACTTGCC

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSDSATDNQPHEQHQTPGERQAAQVLICCAIGFVCFLGAYMRIPVLPLLASGIGASTTQIGLINAAFMLSAGLLAVPSGL
ISDKVGITPVLLAGLALMSAASLLIPLSGNWVALGAIYLVFGVGLAAFTPTMMSSVARIVPRSHVGRAYSWYTTAVYLAM
TIGPAAGGWFGQRLGFRQVFLVSGVLIAVALIAVLCFLPKDTHATHRTHGEGQHPPSSIFSNGRLMAALAGTLGGCFGFG
MYLSFLPLHARAAGLSVDQIGIVFAAQALVNVLLRIPFGHLSDRIDRGAMSGIGLVVCAVALALTGASHTLAAMILGACL
LGAGMGTSFTALSSLVAIVMPAGQRGLGMGLYNSCVYLGMMLSSATMGVVIKRTGFATGFLAAGCITFAATLLFLLLYRG
STSKEK

Sequences:

>Translated_406_residues
MSDSATDNQPHEQHQTPGERQAAQVLICCAIGFVCFLGAYMRIPVLPLLASGIGASTTQIGLINAAFMLSAGLLAVPSGL
ISDKVGITPVLLAGLALMSAASLLIPLSGNWVALGAIYLVFGVGLAAFTPTMMSSVARIVPRSHVGRAYSWYTTAVYLAM
TIGPAAGGWFGQRLGFRQVFLVSGVLIAVALIAVLCFLPKDTHATHRTHGEGQHPPSSIFSNGRLMAALAGTLGGCFGFG
MYLSFLPLHARAAGLSVDQIGIVFAAQALVNVLLRIPFGHLSDRIDRGAMSGIGLVVCAVALALTGASHTLAAMILGACL
LGAGMGTSFTALSSLVAIVMPAGQRGLGMGLYNSCVYLGMMLSSATMGVVIKRTGFATGFLAAGCITFAATLLFLLLYRG
STSKEK
>Mature_405_residues
SDSATDNQPHEQHQTPGERQAAQVLICCAIGFVCFLGAYMRIPVLPLLASGIGASTTQIGLINAAFMLSAGLLAVPSGLI
SDKVGITPVLLAGLALMSAASLLIPLSGNWVALGAIYLVFGVGLAAFTPTMMSSVARIVPRSHVGRAYSWYTTAVYLAMT
IGPAAGGWFGQRLGFRQVFLVSGVLIAVALIAVLCFLPKDTHATHRTHGEGQHPPSSIFSNGRLMAALAGTLGGCFGFGM
YLSFLPLHARAAGLSVDQIGIVFAAQALVNVLLRIPFGHLSDRIDRGAMSGIGLVVCAVALALTGASHTLAAMILGACLL
GAGMGTSFTALSSLVAIVMPAGQRGLGMGLYNSCVYLGMMLSSATMGVVIKRTGFATGFLAAGCITFAATLLFLLLYRGS
TSKEK

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=363, Percent_Identity=25.068870523416, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41856; Mature: 41725

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSATDNQPHEQHQTPGERQAAQVLICCAIGFVCFLGAYMRIPVLPLLASGIGASTTQI
CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
GLINAAFMLSAGLLAVPSGLISDKVGITPVLLAGLALMSAASLLIPLSGNWVALGAIYLV
HHHHHHHHHHCCHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH
FGVGLAAFTPTMMSSVARIVPRSHVGRAYSWYTTAVYLAMTIGPAAGGWFGQRLGFRQVF
HHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LVSGVLIAVALIAVLCFLPKDTHATHRTHGEGQHPPSSIFSNGRLMAALAGTLGGCFGFG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
MYLSFLPLHARAAGLSVDQIGIVFAAQALVNVLLRIPFGHLSDRIDRGAMSGIGLVVCAV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALALTGASHTLAAMILGACLLGAGMGTSFTALSSLVAIVMPAGQRGLGMGLYNSCVYLGM
HHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
MLSSATMGVVIKRTGFATGFLAAGCITFAATLLFLLLYRGSTSKEK
HHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDSATDNQPHEQHQTPGERQAAQVLICCAIGFVCFLGAYMRIPVLPLLASGIGASTTQI
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
GLINAAFMLSAGLLAVPSGLISDKVGITPVLLAGLALMSAASLLIPLSGNWVALGAIYLV
HHHHHHHHHHCCHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH
FGVGLAAFTPTMMSSVARIVPRSHVGRAYSWYTTAVYLAMTIGPAAGGWFGQRLGFRQVF
HHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LVSGVLIAVALIAVLCFLPKDTHATHRTHGEGQHPPSSIFSNGRLMAALAGTLGGCFGFG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
MYLSFLPLHARAAGLSVDQIGIVFAAQALVNVLLRIPFGHLSDRIDRGAMSGIGLVVCAV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALALTGASHTLAAMILGACLLGAGMGTSFTALSSLVAIVMPAGQRGLGMGLYNSCVYLGM
HHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
MLSSATMGVVIKRTGFATGFLAAGCITFAATLLFLLLYRGSTSKEK
HHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]