| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is zraS [H]
Identifier: 197118191
GI number: 197118191
Start: 2089667
End: 2091739
Strand: Direct
Name: zraS [H]
Synonym: Gbem_1806
Alternate gene names: 197118191
Gene position: 2089667-2091739 (Clockwise)
Preceding gene: 197118190
Following gene: 197118192
Centisome position: 45.28
GC content: 62.9
Gene sequence:
>2073_bases ATGGCGCTTTCGCTTGTTGCGATCATCTTGCTTTTGTTTGCCATGCTGAGGATAATCCGGCTGGAGCGCAAAAGCGCCTG CCGCACCTTATTGGCCATCCCCTTTTGCGCCGTCGCCTTCCTGGAGTTCTTCGACTTTGCGGCGCTGTACCAGTTCTTCC CCGAGGTGGACTGGAAGCGGTTGTCGCTTGGGGTCGAGGCGCTGCTCCCGGCGCTTTGGCTGCTGGTGAGCCTCACCTAT GCCCGGGACCTGCCCGAACGCGGGCTTTCGCGCTCGACCCGCCTGATGCTCGCCGGCGCCTTCGCTTTGGTCCTGGTCCC CGTCTTGATGCCGGGGGAGGCTCTTTACTACGCTCCCGACTTCCCTCTGGAGCGGATGCTTTTTCTCACCGACGTCGGGT ACTACTTCTACGTCGCGATGCTGGTCCTTTTGGTGGTGGCGCTCATGAACCTCGAGTCCACCCTGGTGAACGCCTCCTCC GAGGCGCTTTGGCGCGTTAAGCTCGACATCGTGGCGCTGGGCTCCGTGCTCGCCGTCTGCGTCTTCTACTACACCAACGC GCTCTTGTACCGCTCGCTCAACATGGAGCTGGTTCCCCTGCGCTCGCTTGTTTCCATCATCGCCGCGCTGATGATCGTCT ACTCGCGCACCCACTGGAGGGGAACGGCGCAGGTGAAGGTCTCGCAGGCGGTCCTTTTGAAGTCCGTTGTCCTCACCGTA ATCGCCGGGTATCTGTTGCTCCTGGGGTCCATCGGTGAGGGGATGAAGTACTTCGGCGCGCTCTTTCCCCGCGTGCTCGC CCTGTCGCTTGGGTTCATCGCGGGGATGCTCCTGCTCCTTTTGCTCCTCTCCGAGCGCGCCCAAAGGGAGCTGAAGGTCT TCCTCCATAAGCACTTCTACCAGAGCAAGTACGACTACCGGGCCCAGTGGCTGGGGCTCACCGAACGCCTGGCCAATTTC GAGAGCGGCGACGGGCTTTTGAGGCTGGTCCTCTCCGCCTACTGCGACATCTTCGGAGTGAGGGGGGGGGCGCTGTTCCT GCACCAGGACGGGTGCGGCTGGTTCTGCGCCACTGGGATCCAGGAGCTGGAAGAGGTCAGGGTAACCATCGCCGCCGACA ACCCGCTCATCGCCTATCTGCGCGACCGCCGCTGGGTCTTTTGCAGCCGGGACGACAACCCGGAGATCCTGGAGGCCAAC TGCCGCTGGCTTAGGGAACTGAAGGTGAGCTTCGCCATCCCTCTTTTCGAGGGGGAGGCGCTAACCGGTTTCATCGTTTT GGGCGAGCAGGTGGTTCCGGACGAAGAGTACCGCTACGAGGATTACGACCTGATGAAGGCGATCGCGCGCCAGGCCTCGG TGGCGATACAGCACCAGCGCCTCTCCGAGCAACTCACCCAGGCGAAAGCGATGGAGGCGGTGGGGAATCTGGCCACTTTC GTGGTGCACGACCTGAAAAACCTGGCGGCCACCGTATCGCTCGTGGTGGAAAACGCCCGGGAGCACCTGGACAACCCCGA GTTCCAAAAGGACATGCTCTCAAGCCTCGGCAACACCACGAGGAAGATGCACACGCTCATAGGCCGCCTGCGAAACCTCG GCGAGAGCGAACTCTTGCACATGCGCCCCGTAGACCTGCTGGCGTTGGCCCGGCACTCGGCGCGCCAGGTGCAGGGGAGG GCGGTCACGGTGCAGGGGACGCCGGAGAAGGTCATAGGCGACGAGGAAGAATTGGAGAAGGTGCTTTTGAACCTCTTCCT GAACGCGGTGGAGGCTTCCGAGCCGGGGACCCAGATCGTGGCGGAGGTGGGATGCGCGGACTCCCCCTACCTCAAGGTGT CGGACAGCGGCTGCGGCATGTCGCCGCTTTTCATACGGAACGAACTTTTTGCACCGTTCAAGACCACGAAGCAGGCGGGG CTCGGCATCGGGCTCTACCAGTGCCGGCAGATCGTGGCGGCGCACGGCGGCAGGATCGAGGTATGCAGCGTAGAGGGGGA GGGGACCGTGTTCACGGTATGGTTCCCGTCCCCTGCGCTAGGCGCGGAACGGGTCATCACACAGCCGGCATGA
Upstream 100 bases:
>100_bases CGGTCTTGATCGACGTGAAGAGCATGTTCGACCGGGAGCGGGTTGAAGAGGCCGGTGTCAAGGTCTGGGCGTTATAAAGG GTTGAATCCCAGAGGGGAAC
Downstream 100 bases:
>100_bases GGGGGTGGTAGTGAAAAAACTATTGATTGTCGACGACAACGACGATATCAGGCAGCAGTTGAAGTGGGGCCTGAACCAGG AATTCCAGGTGCTTTTGGCG
Product: GAF domain-containing sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 690; Mature: 689
Protein sequence:
>690_residues MALSLVAIILLLFAMLRIIRLERKSACRTLLAIPFCAVAFLEFFDFAALYQFFPEVDWKRLSLGVEALLPALWLLVSLTY ARDLPERGLSRSTRLMLAGAFALVLVPVLMPGEALYYAPDFPLERMLFLTDVGYYFYVAMLVLLVVALMNLESTLVNASS EALWRVKLDIVALGSVLAVCVFYYTNALLYRSLNMELVPLRSLVSIIAALMIVYSRTHWRGTAQVKVSQAVLLKSVVLTV IAGYLLLLGSIGEGMKYFGALFPRVLALSLGFIAGMLLLLLLLSERAQRELKVFLHKHFYQSKYDYRAQWLGLTERLANF ESGDGLLRLVLSAYCDIFGVRGGALFLHQDGCGWFCATGIQELEEVRVTIAADNPLIAYLRDRRWVFCSRDDNPEILEAN CRWLRELKVSFAIPLFEGEALTGFIVLGEQVVPDEEYRYEDYDLMKAIARQASVAIQHQRLSEQLTQAKAMEAVGNLATF VVHDLKNLAATVSLVVENAREHLDNPEFQKDMLSSLGNTTRKMHTLIGRLRNLGESELLHMRPVDLLALARHSARQVQGR AVTVQGTPEKVIGDEEELEKVLLNLFLNAVEASEPGTQIVAEVGCADSPYLKVSDSGCGMSPLFIRNELFAPFKTTKQAG LGIGLYQCRQIVAAHGGRIEVCSVEGEGTVFTVWFPSPALGAERVITQPA
Sequences:
>Translated_690_residues MALSLVAIILLLFAMLRIIRLERKSACRTLLAIPFCAVAFLEFFDFAALYQFFPEVDWKRLSLGVEALLPALWLLVSLTY ARDLPERGLSRSTRLMLAGAFALVLVPVLMPGEALYYAPDFPLERMLFLTDVGYYFYVAMLVLLVVALMNLESTLVNASS EALWRVKLDIVALGSVLAVCVFYYTNALLYRSLNMELVPLRSLVSIIAALMIVYSRTHWRGTAQVKVSQAVLLKSVVLTV IAGYLLLLGSIGEGMKYFGALFPRVLALSLGFIAGMLLLLLLLSERAQRELKVFLHKHFYQSKYDYRAQWLGLTERLANF ESGDGLLRLVLSAYCDIFGVRGGALFLHQDGCGWFCATGIQELEEVRVTIAADNPLIAYLRDRRWVFCSRDDNPEILEAN CRWLRELKVSFAIPLFEGEALTGFIVLGEQVVPDEEYRYEDYDLMKAIARQASVAIQHQRLSEQLTQAKAMEAVGNLATF VVHDLKNLAATVSLVVENAREHLDNPEFQKDMLSSLGNTTRKMHTLIGRLRNLGESELLHMRPVDLLALARHSARQVQGR AVTVQGTPEKVIGDEEELEKVLLNLFLNAVEASEPGTQIVAEVGCADSPYLKVSDSGCGMSPLFIRNELFAPFKTTKQAG LGIGLYQCRQIVAAHGGRIEVCSVEGEGTVFTVWFPSPALGAERVITQPA >Mature_689_residues ALSLVAIILLLFAMLRIIRLERKSACRTLLAIPFCAVAFLEFFDFAALYQFFPEVDWKRLSLGVEALLPALWLLVSLTYA RDLPERGLSRSTRLMLAGAFALVLVPVLMPGEALYYAPDFPLERMLFLTDVGYYFYVAMLVLLVVALMNLESTLVNASSE ALWRVKLDIVALGSVLAVCVFYYTNALLYRSLNMELVPLRSLVSIIAALMIVYSRTHWRGTAQVKVSQAVLLKSVVLTVI AGYLLLLGSIGEGMKYFGALFPRVLALSLGFIAGMLLLLLLLSERAQRELKVFLHKHFYQSKYDYRAQWLGLTERLANFE SGDGLLRLVLSAYCDIFGVRGGALFLHQDGCGWFCATGIQELEEVRVTIAADNPLIAYLRDRRWVFCSRDDNPEILEANC RWLRELKVSFAIPLFEGEALTGFIVLGEQVVPDEEYRYEDYDLMKAIARQASVAIQHQRLSEQLTQAKAMEAVGNLATFV VHDLKNLAATVSLVVENAREHLDNPEFQKDMLSSLGNTTRKMHTLIGRLRNLGESELLHMRPVDLLALARHSARQVQGRA VTVQGTPEKVIGDEEELEKVLLNLFLNAVEASEPGTQIVAEVGCADSPYLKVSDSGCGMSPLFIRNELFAPFKTTKQAGL GIGLYQCRQIVAAHGGRIEVCSVEGEGTVFTVWFPSPALGAERVITQPA
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=29.5652173913043, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1788549, Length=232, Percent_Identity=28.0172413793103, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 76822; Mature: 76691
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSLVAIILLLFAMLRIIRLERKSACRTLLAIPFCAVAFLEFFDFAALYQFFPEVDWKR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LSLGVEALLPALWLLVSLTYARDLPERGLSRSTRLMLAGAFALVLVPVLMPGEALYYAPD HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCC FPLERMLFLTDVGYYFYVAMLVLLVVALMNLESTLVNASSEALWRVKLDIVALGSVLAVC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH VFYYTNALLYRSLNMELVPLRSLVSIIAALMIVYSRTHWRGTAQVKVSQAVLLKSVVLTV HHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHH IAGYLLLLGSIGEGMKYFGALFPRVLALSLGFIAGMLLLLLLLSERAQRELKVFLHKHFY HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSKYDYRAQWLGLTERLANFESGDGLLRLVLSAYCDIFGVRGGALFLHQDGCGWFCATGI HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH QELEEVRVTIAADNPLIAYLRDRRWVFCSRDDNPEILEANCRWLRELKVSFAIPLFEGEA HHHHHCEEEEECCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEECCCC LTGFIVLGEQVVPDEEYRYEDYDLMKAIARQASVAIQHQRLSEQLTQAKAMEAVGNLATF EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVHDLKNLAATVSLVVENAREHLDNPEFQKDMLSSLGNTTRKMHTLIGRLRNLGESELLH HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHEEC MRPVDLLALARHSARQVQGRAVTVQGTPEKVIGDEEELEKVLLNLFLNAVEASEPGTQIV CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH AEVGCADSPYLKVSDSGCGMSPLFIRNELFAPFKTTKQAGLGIGLYQCRQIVAAHGGRIE HHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCEEE VCSVEGEGTVFTVWFPSPALGAERVITQPA EEEECCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure ALSLVAIILLLFAMLRIIRLERKSACRTLLAIPFCAVAFLEFFDFAALYQFFPEVDWKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LSLGVEALLPALWLLVSLTYARDLPERGLSRSTRLMLAGAFALVLVPVLMPGEALYYAPD HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCC FPLERMLFLTDVGYYFYVAMLVLLVVALMNLESTLVNASSEALWRVKLDIVALGSVLAVC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH VFYYTNALLYRSLNMELVPLRSLVSIIAALMIVYSRTHWRGTAQVKVSQAVLLKSVVLTV HHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHH IAGYLLLLGSIGEGMKYFGALFPRVLALSLGFIAGMLLLLLLLSERAQRELKVFLHKHFY HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSKYDYRAQWLGLTERLANFESGDGLLRLVLSAYCDIFGVRGGALFLHQDGCGWFCATGI HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH QELEEVRVTIAADNPLIAYLRDRRWVFCSRDDNPEILEANCRWLRELKVSFAIPLFEGEA HHHHHCEEEEECCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEECCCC LTGFIVLGEQVVPDEEYRYEDYDLMKAIARQASVAIQHQRLSEQLTQAKAMEAVGNLATF EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVHDLKNLAATVSLVVENAREHLDNPEFQKDMLSSLGNTTRKMHTLIGRLRNLGESELLH HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHEEC MRPVDLLALARHSARQVQGRAVTVQGTPEKVIGDEEELEKVLLNLFLNAVEASEPGTQIV CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH AEVGCADSPYLKVSDSGCGMSPLFIRNELFAPFKTTKQAGLGIGLYQCRQIVAAHGGRIE HHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCEEE VCSVEGEGTVFTVWFPSPALGAERVITQPA EEEECCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]