Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118181

Identifier: 197118181

GI number: 197118181

Start: 2073942

End: 2076026

Strand: Direct

Name: 197118181

Synonym: Gbem_1796

Alternate gene names: NA

Gene position: 2073942-2076026 (Clockwise)

Preceding gene: 197118180

Following gene: 197118182

Centisome position: 44.94

GC content: 63.98

Gene sequence:

>2085_bases
ATGTTACGGAGACTAAAGAACGTCATCATTGCGGCAGCTCTCGTCCTGTTCGGGGTGCAGGGGGCAGGGGCCGCCATCCT
GTTCAGCGAGGGGTTCGACACCCTGGCCAACTGGAGCCCGCCCCAGGGAGCCTCGGGCGAAGCCTGCGTCAGGGGGCAGA
TCTGCACGACCGCTATCCCCAACGGCTTTTACGATTACCGCGTCGCCGGGACGGAAGCCTGCAGCAACCTGGACGGCAAC
CACAACACGTTGAACATAAACGAGCTCAACGCCAGGGGAGGGTCCGGCAAGGCGGTCACGGTATGGAACGAGCCGTGCTA
CAGCAGAAGCGGCAGCTGGGGGTCCGACGGGCTGCTCGGGGTCGACTTCGCGCCCCAGGACGAGGTATACGTGCGCTACT
GGATCAAGTTCCAGCCTGACTGGAGGTGGGACGGCGACGGCTCCGCCGGCGGGCGCGCGCTGGGCGCTGCCAACACCAGC
CCGATGCAGAAATTCATGCACCTGTCGCACATGAACCCGAGCATCTCCCCGATCTGGGACTTCTTCAGCGGGGTGCAGAA
CAAGCCGCGCTTTACCCCTCAGCTCGCTAAGTTCTCCGGCGGCGCGATGCGCATCCAGTTCAACCTGCCCCATTCGCCAC
TGACGCCCACAAGGGATAGTTCGGCCTCATTCACCCTCAACGTTTACTTAGGAGCGGCACCGCTGGACTGGAGTGTGCCG
GGGACTGGCGGACTTCCGACGCCTCCCGGCGACGGGCAGTGGCACAGCTTCGAATTCTACGCGAAGATGAACAGCGCAGG
GGGGATCGCCAACGGGATCTCCAAGGTGTGGTACGACGGCGCCCTGGTGAGCACTGCCTCCAACGTGGTATGGATCCCGA
CAGGCGACGACCCCGCCCTCTGGCGCTGGAACCATGCCTGGATCGGCGGCAACAACTCCAACACCTACCTTCCCGCCAAC
GAGCAGTGGTACGCCGTCGACGACTTCGTGGTCAGTACCCATTACAGCGGGCCGCCTCCGCCTCCCGATACGCTCAGGGC
CGAAGGGATAAGCACCTCGTCGATACGCCTCACCTGGCAAAGCGGCAGCAACGGTGCCACCTACTTGGTGGACGGCTACC
GCATCTACTACGGGACCGACCCCGCCAATCTCAACGGCTCGGTCACCGTCGCAGCCTCGCAAAGGGAGGCCGTGGTGACT
TCCCTTGCCGCCGGCACCAGGTACTATTTCGCTGCCACCGCGTTCAAGCAGGAAGCAAGCGACGCCAACGAGAATGAAAG
CCTGCGCAGCGCCTCGGCCAACGCCGTCACGGTCGACCTGGTCCGGCCGGACATCACACTGGCCCCCGTCACCTCCCCCA
CGCGGGTGGCCAGTCAAACCCTCTCCGGGACCGTCGCGGACGCCGGCGGCATCGCCTCGGTGCTGGTCAAGGTCGGCGCC
GCGGCGCCTGTCGCCGCGACAGTCACAGGGAACCGCTGGAGCTGCACCGTTCACAATTTGACCGAAGGGGCAAACAGCAT
CGTGGCGACCGCACAGGACCTCTCCGGCAACGAGTCCACGGCAAGCGGCACCATCATGCTGGATACCCATCCTCCCGTGG
TCACCGTGTCTGCCTTCATTACGCCGACCATATTCACCTCGCAGACCATATCGGGGACCGTGACCGACGTGGGCGGGATG
GTCGATTCGGTTTCGGTGCAGGTGGGGAACGGCCAGAGCCAGGCCGCCCAGGTGAACGGCTACGTCTGGAGCTTTCTGGT
GAAAAACCTTCAGCCCGGTGTCGCCACCGCGATCACCGTGTCGGCCCGCGACACCGCAGGAAACGAGAGCAGCCAGAACT
CCGCGCTGATGTCCTCGATAGGGGTCCTCAAAGCGGGGGATCTATCCGGAGATAACTCGGTGGGGGTGGATGACGCCCAG
CTTGCCATGCAGATGGGGGTAGGGATGAAAAAGCCCGATGCCGGCCAACTGCAGCGCGGTGACCTGGCACCGATGGTCGG
GGGAATACCGCAGCCGGACGGGGTGATTGACACAGGAGATGCCTTGTTGATACTGGGCATCGTTACCGGAATGGTGAGGT
TTTAA

Upstream 100 bases:

>100_bases
GTGCTGGAGCAGTTCAAGGCCTACAACCTACTCGTCAGCAGGGTGCAGCAGACAATGTGAGGCAGAAGCAACGATTCATG
TTATGGGAATGGAGAAGATC

Downstream 100 bases:

>100_bases
CAACATGAACAAAAAGCGAATTATGAAACTTGCTGTCTCAGCAACCTCGCTGCTGTCTTTTGTCTCGCTGCTCGCCGGTT
GTGGCGGCGGCGGTGGAGAA

Product: fibronectin type III domain-containing protein

Products: NA

Alternate protein names: Fibronectin Type III Domain-Containing Protein; Fibronectin Type III Domain Protein; Ig Family Protein; Polymorphic Outer Membrane Protein

Number of amino acids: Translated: 694; Mature: 694

Protein sequence:

>694_residues
MLRRLKNVIIAAALVLFGVQGAGAAILFSEGFDTLANWSPPQGASGEACVRGQICTTAIPNGFYDYRVAGTEACSNLDGN
HNTLNINELNARGGSGKAVTVWNEPCYSRSGSWGSDGLLGVDFAPQDEVYVRYWIKFQPDWRWDGDGSAGGRALGAANTS
PMQKFMHLSHMNPSISPIWDFFSGVQNKPRFTPQLAKFSGGAMRIQFNLPHSPLTPTRDSSASFTLNVYLGAAPLDWSVP
GTGGLPTPPGDGQWHSFEFYAKMNSAGGIANGISKVWYDGALVSTASNVVWIPTGDDPALWRWNHAWIGGNNSNTYLPAN
EQWYAVDDFVVSTHYSGPPPPPDTLRAEGISTSSIRLTWQSGSNGATYLVDGYRIYYGTDPANLNGSVTVAASQREAVVT
SLAAGTRYYFAATAFKQEASDANENESLRSASANAVTVDLVRPDITLAPVTSPTRVASQTLSGTVADAGGIASVLVKVGA
AAPVAATVTGNRWSCTVHNLTEGANSIVATAQDLSGNESTASGTIMLDTHPPVVTVSAFITPTIFTSQTISGTVTDVGGM
VDSVSVQVGNGQSQAAQVNGYVWSFLVKNLQPGVATAITVSARDTAGNESSQNSALMSSIGVLKAGDLSGDNSVGVDDAQ
LAMQMGVGMKKPDAGQLQRGDLAPMVGGIPQPDGVIDTGDALLILGIVTGMVRF

Sequences:

>Translated_694_residues
MLRRLKNVIIAAALVLFGVQGAGAAILFSEGFDTLANWSPPQGASGEACVRGQICTTAIPNGFYDYRVAGTEACSNLDGN
HNTLNINELNARGGSGKAVTVWNEPCYSRSGSWGSDGLLGVDFAPQDEVYVRYWIKFQPDWRWDGDGSAGGRALGAANTS
PMQKFMHLSHMNPSISPIWDFFSGVQNKPRFTPQLAKFSGGAMRIQFNLPHSPLTPTRDSSASFTLNVYLGAAPLDWSVP
GTGGLPTPPGDGQWHSFEFYAKMNSAGGIANGISKVWYDGALVSTASNVVWIPTGDDPALWRWNHAWIGGNNSNTYLPAN
EQWYAVDDFVVSTHYSGPPPPPDTLRAEGISTSSIRLTWQSGSNGATYLVDGYRIYYGTDPANLNGSVTVAASQREAVVT
SLAAGTRYYFAATAFKQEASDANENESLRSASANAVTVDLVRPDITLAPVTSPTRVASQTLSGTVADAGGIASVLVKVGA
AAPVAATVTGNRWSCTVHNLTEGANSIVATAQDLSGNESTASGTIMLDTHPPVVTVSAFITPTIFTSQTISGTVTDVGGM
VDSVSVQVGNGQSQAAQVNGYVWSFLVKNLQPGVATAITVSARDTAGNESSQNSALMSSIGVLKAGDLSGDNSVGVDDAQ
LAMQMGVGMKKPDAGQLQRGDLAPMVGGIPQPDGVIDTGDALLILGIVTGMVRF
>Mature_694_residues
MLRRLKNVIIAAALVLFGVQGAGAAILFSEGFDTLANWSPPQGASGEACVRGQICTTAIPNGFYDYRVAGTEACSNLDGN
HNTLNINELNARGGSGKAVTVWNEPCYSRSGSWGSDGLLGVDFAPQDEVYVRYWIKFQPDWRWDGDGSAGGRALGAANTS
PMQKFMHLSHMNPSISPIWDFFSGVQNKPRFTPQLAKFSGGAMRIQFNLPHSPLTPTRDSSASFTLNVYLGAAPLDWSVP
GTGGLPTPPGDGQWHSFEFYAKMNSAGGIANGISKVWYDGALVSTASNVVWIPTGDDPALWRWNHAWIGGNNSNTYLPAN
EQWYAVDDFVVSTHYSGPPPPPDTLRAEGISTSSIRLTWQSGSNGATYLVDGYRIYYGTDPANLNGSVTVAASQREAVVT
SLAAGTRYYFAATAFKQEASDANENESLRSASANAVTVDLVRPDITLAPVTSPTRVASQTLSGTVADAGGIASVLVKVGA
AAPVAATVTGNRWSCTVHNLTEGANSIVATAQDLSGNESTASGTIMLDTHPPVVTVSAFITPTIFTSQTISGTVTDVGGM
VDSVSVQVGNGQSQAAQVNGYVWSFLVKNLQPGVATAITVSARDTAGNESSQNSALMSSIGVLKAGDLSGDNSVGVDDAQ
LAMQMGVGMKKPDAGQLQRGDLAPMVGGIPQPDGVIDTGDALLILGIVTGMVRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72696; Mature: 72696

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRLKNVIIAAALVLFGVQGAGAAILFSEGFDTLANWSPPQGASGEACVRGQICTTAIP
CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCCCCCCCEEEECCEEEECCC
NGFYDYRVAGTEACSNLDGNHNTLNINELNARGGSGKAVTVWNEPCYSRSGSWGSDGLLG
CCCEEEEEECHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEE
VDFAPQDEVYVRYWIKFQPDWRWDGDGSAGGRALGAANTSPMQKFMHLSHMNPSISPIWD
ECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCHHHHH
FFSGVQNKPRFTPQLAKFSGGAMRIQFNLPHSPLTPTRDSSASFTLNVYLGAAPLDWSVP
HHHCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCC
GTGGLPTPPGDGQWHSFEFYAKMNSAGGIANGISKVWYDGALVSTASNVVWIPTGDDPAL
CCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCEEEECCCCEEEEECCCCCCE
WRWNHAWIGGNNSNTYLPANEQWYAVDDFVVSTHYSGPPPPPDTLRAEGISTSSIRLTWQ
EEEEEEEECCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCCCEECCCCCCEEEEEEE
SGSNGATYLVDGYRIYYGTDPANLNGSVTVAASQREAVVTSLAAGTRYYFAATAFKQEAS
CCCCCCEEEEECEEEEECCCCCCCCCEEEEEECCCHHHHHHHHCCCEEEEEEHHHHHHCC
DANENESLRSASANAVTVDLVRPDITLAPVTSPTRVASQTLSGTVADAGGIASVLVKVGA
CCCCCHHHHHCCCCEEEEEEECCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCC
AAPVAATVTGNRWSCTVHNLTEGANSIVATAQDLSGNESTASGTIMLDTHPPVVTVSAFI
CCCEEEEEECCEEEEEEECHHCCCCEEEEEHHHCCCCCCCCCCEEEEECCCCEEEEEEEE
TPTIFTSQTISGTVTDVGGMVDSVSVQVGNGQSQAAQVNGYVWSFLVKNLQPGVATAITV
CCEEEECCCCCCCHHHHCCCEEEEEEEECCCCCCEEEECCHHHHHHHHHCCCCCEEEEEE
SARDTAGNESSQNSALMSSIGVLKAGDLSGDNSVGVDDAQLAMQMGVGMKKPDAGQLQRG
EECCCCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
DLAPMVGGIPQPDGVIDTGDALLILGIVTGMVRF
CCCHHHCCCCCCCCEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRRLKNVIIAAALVLFGVQGAGAAILFSEGFDTLANWSPPQGASGEACVRGQICTTAIP
CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCCCCCCCEEEECCEEEECCC
NGFYDYRVAGTEACSNLDGNHNTLNINELNARGGSGKAVTVWNEPCYSRSGSWGSDGLLG
CCCEEEEEECHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEE
VDFAPQDEVYVRYWIKFQPDWRWDGDGSAGGRALGAANTSPMQKFMHLSHMNPSISPIWD
ECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCHHHHH
FFSGVQNKPRFTPQLAKFSGGAMRIQFNLPHSPLTPTRDSSASFTLNVYLGAAPLDWSVP
HHHCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCC
GTGGLPTPPGDGQWHSFEFYAKMNSAGGIANGISKVWYDGALVSTASNVVWIPTGDDPAL
CCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCEEEECCCCEEEEECCCCCCE
WRWNHAWIGGNNSNTYLPANEQWYAVDDFVVSTHYSGPPPPPDTLRAEGISTSSIRLTWQ
EEEEEEEECCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCCCEECCCCCCEEEEEEE
SGSNGATYLVDGYRIYYGTDPANLNGSVTVAASQREAVVTSLAAGTRYYFAATAFKQEAS
CCCCCCEEEEECEEEEECCCCCCCCCEEEEEECCCHHHHHHHHCCCEEEEEEHHHHHHCC
DANENESLRSASANAVTVDLVRPDITLAPVTSPTRVASQTLSGTVADAGGIASVLVKVGA
CCCCCHHHHHCCCCEEEEEEECCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCC
AAPVAATVTGNRWSCTVHNLTEGANSIVATAQDLSGNESTASGTIMLDTHPPVVTVSAFI
CCCEEEEEECCEEEEEEECHHCCCCEEEEEHHHCCCCCCCCCCEEEEECCCCEEEEEEEE
TPTIFTSQTISGTVTDVGGMVDSVSVQVGNGQSQAAQVNGYVWSFLVKNLQPGVATAITV
CCEEEECCCCCCCHHHHCCCEEEEEEEECCCCCCEEEECCHHHHHHHHHCCCCCEEEEEE
SARDTAGNESSQNSALMSSIGVLKAGDLSGDNSVGVDDAQLAMQMGVGMKKPDAGQLQRG
EECCCCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
DLAPMVGGIPQPDGVIDTGDALLILGIVTGMVRF
CCCHHHCCCCCCCCEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA