Click here to switch to the map view.

The map label for this gene is 197118152

Identifier: 197118152

GI number: 197118152

Start: 2035913

End: 2038561

Strand: Direct

Name: 197118152

Synonym: Gbem_1767

Alternate gene names: NA

Gene position: 2035913-2038561 (Clockwise)

Preceding gene: 197118149

Following gene: 197118153

Centisome position: 44.11

GC content: 56.17

Gene sequence:

>2649_bases
ATGATGAAGAAGTTTTGTCTCGTGTTGGTCATCCTGCTCACCTGTGCTGGATGCAGCAGTAAGACGAAAGAGTCTCTCTA
TAACGAGGGAAAGCAACAGTTGGAGGCTTCTAATCCTGGCGCTGCCGTCGTCTTCTTCAAGAACGCGCTGGAAAAGGATG
GGAATTATCTGGAGGCACGTTTCCAGTTAGCCAAGGCATATGCGGCCCTTGGAAAGAACGAGCAGGCGGAAAAGGAATTC
ACCAAAGTCCTGACCCAGAATCCGACTAGGGACGAGGTACTGCTGGAACTGGCTAAGCTGAATAATGCTAGTGGGAAAGG
TGCCCAAGGTTTCAGCTATGCCACGCAATACCTCGCAAAACATCCAGGGGCGGTTGATGGTCTCGAGGCTGCGGGGATTT
CCTGTCTTGTCAGTAAAAAGCACCAGGAAGCGCGTGAATACTTTACTCAGGCTCTCAAAGTCGATCCTTCCCGCAGCGCC
ACAAAGCTGGAGCTTGCGTCGTTAGATATGGCCACAGGTGATACTGAGAGGGCCAAGGCTCTGCTCAATGAAGTGATCCT
GGCGGAACAGAAAAATTTCAAGGCGCTCTATATGCTGGCAGCCATAGAGAACAATTCGGGCCACGGCGATAAGGCTGCCG
TTCTGTATCAAAAAATATTGCAACTGGATCAGAATCAGGTTCTTGCTCTGTATAAACTAGGGCTGCTGTATTTGGAAAGG
GGTGAAGTGGACAAGGCCGATCAAAGAGCCGACCAAATGATCAAGGCCTTCCCAAAAAAAGGTGATGGTTACCGTCTTAA
AGGGCTGGCCGCCTTTTACCGCAAAAGATTCGACGACGCCATTACTTCGCTGCAGCAGTCTGTGAAGCTCTCACCGACCC
TTGAGGCATATCATTTCTTGGGACTTAGCTACTACAGCAAAGGCGAGTTGGAGAACGCCCTGAGCCAGTTCCGCGTGGTG
TTGGACCGGGTGCCTGAAGCTCGCAAGTCTAGGCTCATGACTGCGCAGACACTATTGGCGCAAAAGCGGACTGAGGACGG
CATAGCCGAGATCAAGAAGGTTTTGGCCTCCGACGACAACGACGCTGTGGCCCACAACCTTTTGGGCGGGGCCTACATGT
CACAGGGACTCTTCGAGGAGGGGATGCGCGAGCTGAACCTGGCCACAAAGCTCGATCCCAAGATGGTCAACGCCCACCTC
AAGAAGGGCGCCTTTTATTTTAGTAAGGGGAGGTATACCGAAGGAGAGACAGAGCTTGCCACCGCCGTTCAAGCCGCTCC
CGACGCCCAAAACAGCCGGCTTTTGCTTGCCTCCTACTACCAGAGCCAAAAAAAGCCGGCGAAGGCGCTCTCGACGCTTA
AATCGGGACTCAAAGGGGGCAAAGGCGATGCCCCGCTTTACAACGCTATCGCTTCGCTGCAGTTCTCTGGGGGGAACAAA
GCCGAGGGGATTAAGACTCTGGAGCAGGCCAAGCGCGTTGACCCAGGCTTTGCGGCGACCTACCAGAACCTTGCCGGCGT
TTACGCCGCAACCGGAGATTATCCCCGCGCGATGGCGGAGCTTAACCAGTTGCTCGCCAGGGATGCCGGCAACCTGCGCG
CTCTGCTCGGCCTGGCCGCCCTGAGCGAAATCAGTGGCAAAGAGTCGGACGCAGTCGCCTATTACCAGAAAGCTACCCAG
ACCAAGGCGCCGGAAGCGTTCCTGGCCCTGGCTGGTTACCATCAGAAAAAAGGGAATGTGGCGAAGGCCATAGGCGTTTT
GGACGAGGAGATCAAAATAGATCCTCGCGCCATTTCGGCGCTAGAAGCAAAAGGGCGCATTCTGGCGTCGCAGAAGGAGT
ACCAGAAGGCCCTAAAGGTATTCGACCAGGTCGAGGCCCTTAACGAGGAGCGTGGCGTTGCACTCAAGATAGGCGCCTAT
GTGGCGATGAACGATTCTTCCAAGGCCGTCGAGCAGGCAGGTCGTCTCATCGCGAAACGTCCCGGTTCCAGCCAGGGGTA
CCTGCTCCTCGCCACGGTCCACCAGAGTCTCAGAAATATCCCTGCCGCTATCAACGAGGTGAACAAGGCAATACGCGCCG
ACGGCAAGAGCGTGGAGGCCCGCATCGCCCTGGGGAACCTCTACCAAGGCACGAAGGAGTACGACAAGGCGCTTGCCTCT
TACCAATATGCGCAGAGGATGAATCCTGATTCCGTCGCCGCCCAGTTCGCCATCGGCGCTCTTTATGACAGTACCGGTAA
AAAGAATCAGGCGGCGGATGCATACCGTGCGGTCCTGCAGAAAAATGACAGATATGTCCCGGCCCTCAACAACCTTGCCT
ACCTCTGTGCCGATGGGTACGGGAGCAAGGAAGAAGCGCTTCGGCTGGCGATCAGTGCTTTCAAGCAGCAGCCTGGCAAT
CCCGGCGTCATGGACACCGTCGGCTATGCACTGGCCAAGAATGGCCGCAGTGCTGACGCGGTGAAGGTTATGGAACGGGC
CGTCGCGCTGCTTCCCAACGACCCGACCGTGCGCTACCACCTAGGACTTGCCTACTATTTGGCCGGGGACAGGGCGAGGA
GCGAGCAGGCGCTGCAAAAATCCCTTTCACTGGGGCAGTCGCCGGACACCAAGGCGGCGCAGACGCTCCTGGCGGAGTTG
AAGAGGTAA

Upstream 100 bases:

>100_bases
TGATAATTAGAGCCCCTTCTGTTAAGAAATCCGACAGCAACCTTTAATCTTCTTTCTCTAGCAGATGCTCTCAACTTTCG
GCTATCTTCGAGGTGCGGTT

Downstream 100 bases:

>100_bases
ACTTCCTGCTGCATCGTCTGTTGCGCCGAGTTTATGGCTACGACCGGCAGCGATGCCGTCATACAGTTTCCTGTTCTTGT
AGAAGGCCACTATAACCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Domain Protein; PEP-CTERM System TPR-Repeat Lipoprotein; Peptidase; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Domain Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide TPR_4 Containing Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; TPR Repeat Domain-Containing Protein; Intermediate Filament Protein; Serine/Threonine Protein Kinase With TPR Repeats; Peptidase S1 And S6 Chymotrypsin/Hap; Glycosyl Transferase Family Protein

Number of amino acids: Translated: 882; Mature: 882

Protein sequence:

>882_residues
MMKKFCLVLVILLTCAGCSSKTKESLYNEGKQQLEASNPGAAVVFFKNALEKDGNYLEARFQLAKAYAALGKNEQAEKEF
TKVLTQNPTRDEVLLELAKLNNASGKGAQGFSYATQYLAKHPGAVDGLEAAGISCLVSKKHQEAREYFTQALKVDPSRSA
TKLELASLDMATGDTERAKALLNEVILAEQKNFKALYMLAAIENNSGHGDKAAVLYQKILQLDQNQVLALYKLGLLYLER
GEVDKADQRADQMIKAFPKKGDGYRLKGLAAFYRKRFDDAITSLQQSVKLSPTLEAYHFLGLSYYSKGELENALSQFRVV
LDRVPEARKSRLMTAQTLLAQKRTEDGIAEIKKVLASDDNDAVAHNLLGGAYMSQGLFEEGMRELNLATKLDPKMVNAHL
KKGAFYFSKGRYTEGETELATAVQAAPDAQNSRLLLASYYQSQKKPAKALSTLKSGLKGGKGDAPLYNAIASLQFSGGNK
AEGIKTLEQAKRVDPGFAATYQNLAGVYAATGDYPRAMAELNQLLARDAGNLRALLGLAALSEISGKESDAVAYYQKATQ
TKAPEAFLALAGYHQKKGNVAKAIGVLDEEIKIDPRAISALEAKGRILASQKEYQKALKVFDQVEALNEERGVALKIGAY
VAMNDSSKAVEQAGRLIAKRPGSSQGYLLLATVHQSLRNIPAAINEVNKAIRADGKSVEARIALGNLYQGTKEYDKALAS
YQYAQRMNPDSVAAQFAIGALYDSTGKKNQAADAYRAVLQKNDRYVPALNNLAYLCADGYGSKEEALRLAISAFKQQPGN
PGVMDTVGYALAKNGRSADAVKVMERAVALLPNDPTVRYHLGLAYYLAGDRARSEQALQKSLSLGQSPDTKAAQTLLAEL
KR

Sequences:

>Translated_882_residues
MMKKFCLVLVILLTCAGCSSKTKESLYNEGKQQLEASNPGAAVVFFKNALEKDGNYLEARFQLAKAYAALGKNEQAEKEF
TKVLTQNPTRDEVLLELAKLNNASGKGAQGFSYATQYLAKHPGAVDGLEAAGISCLVSKKHQEAREYFTQALKVDPSRSA
TKLELASLDMATGDTERAKALLNEVILAEQKNFKALYMLAAIENNSGHGDKAAVLYQKILQLDQNQVLALYKLGLLYLER
GEVDKADQRADQMIKAFPKKGDGYRLKGLAAFYRKRFDDAITSLQQSVKLSPTLEAYHFLGLSYYSKGELENALSQFRVV
LDRVPEARKSRLMTAQTLLAQKRTEDGIAEIKKVLASDDNDAVAHNLLGGAYMSQGLFEEGMRELNLATKLDPKMVNAHL
KKGAFYFSKGRYTEGETELATAVQAAPDAQNSRLLLASYYQSQKKPAKALSTLKSGLKGGKGDAPLYNAIASLQFSGGNK
AEGIKTLEQAKRVDPGFAATYQNLAGVYAATGDYPRAMAELNQLLARDAGNLRALLGLAALSEISGKESDAVAYYQKATQ
TKAPEAFLALAGYHQKKGNVAKAIGVLDEEIKIDPRAISALEAKGRILASQKEYQKALKVFDQVEALNEERGVALKIGAY
VAMNDSSKAVEQAGRLIAKRPGSSQGYLLLATVHQSLRNIPAAINEVNKAIRADGKSVEARIALGNLYQGTKEYDKALAS
YQYAQRMNPDSVAAQFAIGALYDSTGKKNQAADAYRAVLQKNDRYVPALNNLAYLCADGYGSKEEALRLAISAFKQQPGN
PGVMDTVGYALAKNGRSADAVKVMERAVALLPNDPTVRYHLGLAYYLAGDRARSEQALQKSLSLGQSPDTKAAQTLLAEL
KR
>Mature_882_residues
MMKKFCLVLVILLTCAGCSSKTKESLYNEGKQQLEASNPGAAVVFFKNALEKDGNYLEARFQLAKAYAALGKNEQAEKEF
TKVLTQNPTRDEVLLELAKLNNASGKGAQGFSYATQYLAKHPGAVDGLEAAGISCLVSKKHQEAREYFTQALKVDPSRSA
TKLELASLDMATGDTERAKALLNEVILAEQKNFKALYMLAAIENNSGHGDKAAVLYQKILQLDQNQVLALYKLGLLYLER
GEVDKADQRADQMIKAFPKKGDGYRLKGLAAFYRKRFDDAITSLQQSVKLSPTLEAYHFLGLSYYSKGELENALSQFRVV
LDRVPEARKSRLMTAQTLLAQKRTEDGIAEIKKVLASDDNDAVAHNLLGGAYMSQGLFEEGMRELNLATKLDPKMVNAHL
KKGAFYFSKGRYTEGETELATAVQAAPDAQNSRLLLASYYQSQKKPAKALSTLKSGLKGGKGDAPLYNAIASLQFSGGNK
AEGIKTLEQAKRVDPGFAATYQNLAGVYAATGDYPRAMAELNQLLARDAGNLRALLGLAALSEISGKESDAVAYYQKATQ
TKAPEAFLALAGYHQKKGNVAKAIGVLDEEIKIDPRAISALEAKGRILASQKEYQKALKVFDQVEALNEERGVALKIGAY
VAMNDSSKAVEQAGRLIAKRPGSSQGYLLLATVHQSLRNIPAAINEVNKAIRADGKSVEARIALGNLYQGTKEYDKALAS
YQYAQRMNPDSVAAQFAIGALYDSTGKKNQAADAYRAVLQKNDRYVPALNNLAYLCADGYGSKEEALRLAISAFKQQPGN
PGVMDTVGYALAKNGRSADAVKVMERAVALLPNDPTVRYHLGLAYYLAGDRARSEQALQKSLSLGQSPDTKAAQTLLAEL
KR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=447, Percent_Identity=22.3713646532438, Blast_Score=80, Evalue=1e-14,
Organism=Homo sapiens, GI32307148, Length=447, Percent_Identity=22.3713646532438, Blast_Score=80, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115532692, Length=303, Percent_Identity=23.4323432343234, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115532690, Length=303, Percent_Identity=23.4323432343234, Blast_Score=72, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17647755, Length=446, Percent_Identity=21.52466367713, Blast_Score=72, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585827, Length=446, Percent_Identity=21.52466367713, Blast_Score=72, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585829, Length=446, Percent_Identity=21.52466367713, Blast_Score=72, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95772; Mature: 95772

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKFCLVLVILLTCAGCSSKTKESLYNEGKQQLEASNPGAAVVFFKNALEKDGNYLEAR
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHH
FQLAKAYAALGKNEQAEKEFTKVLTQNPTRDEVLLELAKLNNASGKGAQGFSYATQYLAK
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
HPGAVDGLEAAGISCLVSKKHQEAREYFTQALKVDPSRSATKLELASLDMATGDTERAKA
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCCCCCCHHHHHH
LLNEVILAEQKNFKALYMLAAIENNSGHGDKAAVLYQKILQLDQNQVLALYKLGLLYLER
HHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEC
GEVDKADQRADQMIKAFPKKGDGYRLKGLAAFYRKRFDDAITSLQQSVKLSPTLEAYHFL
CCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GLSYYSKGELENALSQFRVVLDRVPEARKSRLMTAQTLLAQKRTEDGIAEIKKVLASDDN
HHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
DAVAHNLLGGAYMSQGLFEEGMRELNLATKLDPKMVNAHLKKGAFYFSKGRYTEGETELA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCHHHHH
TAVQAAPDAQNSRLLLASYYQSQKKPAKALSTLKSGLKGGKGDAPLYNAIASLQFSGGNK
HHHHHCCCCCCCCEEHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCC
AEGIKTLEQAKRVDPGFAATYQNLAGVYAATGDYPRAMAELNQLLARDAGNLRALLGLAA
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
LSEISGKESDAVAYYQKATQTKAPEAFLALAGYHQKKGNVAKAIGVLDEEIKIDPRAISA
HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
LEAKGRILASQKEYQKALKVFDQVEALNEERGVALKIGAYVAMNDSSKAVEQAGRLIAKR
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHCC
PGSSQGYLLLATVHQSLRNIPAAINEVNKAIRADGKSVEARIALGNLYQGTKEYDKALAS
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHCCHHHHHHHHHH
YQYAQRMNPDSVAAQFAIGALYDSTGKKNQAADAYRAVLQKNDRYVPALNNLAYLCADGY
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCEEEECCCC
GSKEEALRLAISAFKQQPGNPGVMDTVGYALAKNGRSADAVKVMERAVALLPNDPTVRYH
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEE
LGLAYYLAGDRARSEQALQKSLSLGQSPDTKAAQTLLAELKR
EEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MMKKFCLVLVILLTCAGCSSKTKESLYNEGKQQLEASNPGAAVVFFKNALEKDGNYLEAR
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHH
FQLAKAYAALGKNEQAEKEFTKVLTQNPTRDEVLLELAKLNNASGKGAQGFSYATQYLAK
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
HPGAVDGLEAAGISCLVSKKHQEAREYFTQALKVDPSRSATKLELASLDMATGDTERAKA
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCCCCCCHHHHHH
LLNEVILAEQKNFKALYMLAAIENNSGHGDKAAVLYQKILQLDQNQVLALYKLGLLYLER
HHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEC
GEVDKADQRADQMIKAFPKKGDGYRLKGLAAFYRKRFDDAITSLQQSVKLSPTLEAYHFL
CCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GLSYYSKGELENALSQFRVVLDRVPEARKSRLMTAQTLLAQKRTEDGIAEIKKVLASDDN
HHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
DAVAHNLLGGAYMSQGLFEEGMRELNLATKLDPKMVNAHLKKGAFYFSKGRYTEGETELA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCHHHHH
TAVQAAPDAQNSRLLLASYYQSQKKPAKALSTLKSGLKGGKGDAPLYNAIASLQFSGGNK
HHHHHCCCCCCCCEEHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCC
AEGIKTLEQAKRVDPGFAATYQNLAGVYAATGDYPRAMAELNQLLARDAGNLRALLGLAA
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
LSEISGKESDAVAYYQKATQTKAPEAFLALAGYHQKKGNVAKAIGVLDEEIKIDPRAISA
HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
LEAKGRILASQKEYQKALKVFDQVEALNEERGVALKIGAYVAMNDSSKAVEQAGRLIAKR
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHCC
PGSSQGYLLLATVHQSLRNIPAAINEVNKAIRADGKSVEARIALGNLYQGTKEYDKALAS
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHCCHHHHHHHHHH
YQYAQRMNPDSVAAQFAIGALYDSTGKKNQAADAYRAVLQKNDRYVPALNNLAYLCADGY
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCEEEECCCC
GSKEEALRLAISAFKQQPGNPGVMDTVGYALAKNGRSADAVKVMERAVALLPNDPTVRYH
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEE
LGLAYYLAGDRARSEQALQKSLSLGQSPDTKAAQTLLAELKR
EEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA