Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118136

Identifier: 197118136

GI number: 197118136

Start: 2015664

End: 2017748

Strand: Direct

Name: 197118136

Synonym: Gbem_1751

Alternate gene names: NA

Gene position: 2015664-2017748 (Clockwise)

Preceding gene: 197118132

Following gene: 197118139

Centisome position: 43.67

GC content: 61.25

Gene sequence:

>2085_bases
ATGATTCTCCAATGTGATCAATGCAACACCAAGTTCCGCCTGGACGACTCCAAACTGAAGCCGGGTGGAGTGAAGGTCCG
TTGCTCCAAGTGCCGCCATGTTTTTGTGGCAGGTGCCGAGCAAAAGCAGGAGGAGTCGGAGTTCGACGCCCTGCTCTCGG
GGCTGGGTGCTCCTGCCGCTGCCGCTGCTGCTACTGAGGCGCCGGCTCCTGCAGCAGAAAAAGTTGCAAACGATATGGCT
ACAGTTGAGGCCGGTGTCAAACCGCAGCAGCCTGAAGAATCCGATGGCTTTGGCTTGGGCGATTTTGACTTTTCTGCTGA
CGCGGACGAGGCGTTATCGCCAGCTCCGACGCAAGATACGGCTCTGCCCGAAAAGGCTGCAACTGCCCCGGGTGACGACC
TTGATTTTGGCGATCTCAGTTTCGATACTGCCCCTGCTGCTGCAGAACCCCCTGCGCCGGCGGCACCCGATGCAGAATTC
GGGGACTTCGGGGACTTTGATTTCAATGAGGAAACCGTAGCCGCTCCCCCAAAAGAGCAGCCTGCCGGCGATGAAATAGA
TTTCGGCGAGGTGAGCTTAGATCAAGCGCCTGTGCCTGCAAAAGAAGAGCAAGCGGTGCCAGCCGCGGCAGATGCCTTTG
ATTTCGGCGAGTTTTCCTTTGACGAGGAGACGCCGCTGGTCAAGGAGGAGAGCCCGGCACCCGCGGCAGCGGATGCCTTC
GAGTTCGGGGAGTTCTCCTTCGACGAGTCGGCCCCTGCCACCAAGGAAGAACCGCAGGCTCCTGCTGCGGCGGATTCGTT
GGATTTCGGGGAATTCTCTTTCGAAGAGGGGGCAGGCACCCCCGAGCCGGCGGTGCCTGCAGCGGCGCAATCGCTCGATT
TTGGCGAGTTGTCCTTCGATGAAACACCCAGCGCCGCTAAAGAAGAGACAGCGGAGCCTGCTGGGCCGTCGCATGATTTT
GGCGAGTTCTCCTTTGAAGAGGAAGCCGGTACGCCGCAGCCCGAGGCACCGGCCTCTGCCGCCGGTGCCGGTGCCGGTTT
CGGTGAATTCTCATTTGAAGAGGAAGCTGCCCCCGCCGAGGAAAAGCCGGCAGTTGCTGCCGCCACCATGGATTTCGGCG
AGTTTTCCTTCGAAGAAGAAGCTGCCGGTCCCAAGGAGACTGCAGCCGCCGAACCGGTCGCGCCTGGACAGCCTTCCCCT
GCAGAACCGGATGAAGAATTCAGCTTCGGCGAACTCTCCTTCGGTGAAGAAGCTGAGCCCGAGCCCGCTTCCAAGCCGGC
AGCCGGCCCGGTAGTCGGCGCTGCCTTGGCGGGAGCCGCCCTGGCCGGTGCCGCCGGACTAGCCGCGGCCGGTAAGGCCA
AGGATGCTGCACCTGCTGCTCCCGCCGCTCCGGTCTCGGCGCAGCCCCCAAAGGCTGCTGCTTCGCCGCTCGACTTCCAC
TTCGGCGAACAGCCCCCCGATGTAGCACCCGGGGAGTTTGCGGAGGACGAACTTCCTCCTCTCTCTATAATTTCCCGCCG
CAAAGGGCGGTCCGTATTCACCATCGCTATCGTGGCCATCTCGGTCATCGTGGTGCTGGCCTTGAGCGCTGCAGGGCTTT
ACGTGCTGCAAAGCGGTCCGGCCGCGCTTCAGAAACTGGACAAGATGGGAATCGGTTTCGTGGCAAAGTGGTTTGGGATG
GAGGTCCCGGAGGAAGGGCGCATCACCATCAGGAATCCGCTGGCCTCCTTCCACCAGAACCCCCAGGCCGGGGAACTGTT
CGTGGTGACCGGCGAAGCCGTGAACTCCTTCCGCAAGTCCCGCGCCTCCATTCAGGTACGGGTGAGCCTTTACGACAAAA
GCGGCAAGGTGCTGATGCAGAAAACCGCGTACTGCGGCAACAGGCTCTCGAAGGAGCAACTGACGACACTTCCCTTGGAG
AAGCTTGAGTCGATCATGAACAACCAGTTCGGCGATTCCCTTTCCAACCTCGGCGTAAAGCCTGGGCAGCCTATCGGCTT
CGTTGTGGCCATCGCCAACGTTCCCAAGGAAGCGGCTGATTTCGGAGTCGAGGTGGTGGGCTCGACTGTAGCCGCCGGCC
AGTAA

Upstream 100 bases:

>100_bases
TTAACTCGACCGGCTACACTTCATCGTCGGCGTGACAGGACCTCTCATCCAGTCAGCAGTATCACGCCGGATCTTTTTCA
AAATGAATCGGAGGGGCTGA

Downstream 100 bases:

>100_bases
CGACAGCTCCAGTTTCCTGAAACGCAAAAAGGCCGGCTTGATGCCGGCCTTTTTGCGTCTGCAGTGTTGCTGCGCACCCA
GGTTATCCTGGCGATGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: ATPase; Zinc Finger/Thioredoxin

Number of amino acids: Translated: 694; Mature: 694

Protein sequence:

>694_residues
MILQCDQCNTKFRLDDSKLKPGGVKVRCSKCRHVFVAGAEQKQEESEFDALLSGLGAPAAAAAATEAPAPAAEKVANDMA
TVEAGVKPQQPEESDGFGLGDFDFSADADEALSPAPTQDTALPEKAATAPGDDLDFGDLSFDTAPAAAEPPAPAAPDAEF
GDFGDFDFNEETVAAPPKEQPAGDEIDFGEVSLDQAPVPAKEEQAVPAAADAFDFGEFSFDEETPLVKEESPAPAAADAF
EFGEFSFDESAPATKEEPQAPAAADSLDFGEFSFEEGAGTPEPAVPAAAQSLDFGELSFDETPSAAKEETAEPAGPSHDF
GEFSFEEEAGTPQPEAPASAAGAGAGFGEFSFEEEAAPAEEKPAVAAATMDFGEFSFEEEAAGPKETAAAEPVAPGQPSP
AEPDEEFSFGELSFGEEAEPEPASKPAAGPVVGAALAGAALAGAAGLAAAGKAKDAAPAAPAAPVSAQPPKAAASPLDFH
FGEQPPDVAPGEFAEDELPPLSIISRRKGRSVFTIAIVAISVIVVLALSAAGLYVLQSGPAALQKLDKMGIGFVAKWFGM
EVPEEGRITIRNPLASFHQNPQAGELFVVTGEAVNSFRKSRASIQVRVSLYDKSGKVLMQKTAYCGNRLSKEQLTTLPLE
KLESIMNNQFGDSLSNLGVKPGQPIGFVVAIANVPKEAADFGVEVVGSTVAAGQ

Sequences:

>Translated_694_residues
MILQCDQCNTKFRLDDSKLKPGGVKVRCSKCRHVFVAGAEQKQEESEFDALLSGLGAPAAAAAATEAPAPAAEKVANDMA
TVEAGVKPQQPEESDGFGLGDFDFSADADEALSPAPTQDTALPEKAATAPGDDLDFGDLSFDTAPAAAEPPAPAAPDAEF
GDFGDFDFNEETVAAPPKEQPAGDEIDFGEVSLDQAPVPAKEEQAVPAAADAFDFGEFSFDEETPLVKEESPAPAAADAF
EFGEFSFDESAPATKEEPQAPAAADSLDFGEFSFEEGAGTPEPAVPAAAQSLDFGELSFDETPSAAKEETAEPAGPSHDF
GEFSFEEEAGTPQPEAPASAAGAGAGFGEFSFEEEAAPAEEKPAVAAATMDFGEFSFEEEAAGPKETAAAEPVAPGQPSP
AEPDEEFSFGELSFGEEAEPEPASKPAAGPVVGAALAGAALAGAAGLAAAGKAKDAAPAAPAAPVSAQPPKAAASPLDFH
FGEQPPDVAPGEFAEDELPPLSIISRRKGRSVFTIAIVAISVIVVLALSAAGLYVLQSGPAALQKLDKMGIGFVAKWFGM
EVPEEGRITIRNPLASFHQNPQAGELFVVTGEAVNSFRKSRASIQVRVSLYDKSGKVLMQKTAYCGNRLSKEQLTTLPLE
KLESIMNNQFGDSLSNLGVKPGQPIGFVVAIANVPKEAADFGVEVVGSTVAAGQ
>Mature_694_residues
MILQCDQCNTKFRLDDSKLKPGGVKVRCSKCRHVFVAGAEQKQEESEFDALLSGLGAPAAAAAATEAPAPAAEKVANDMA
TVEAGVKPQQPEESDGFGLGDFDFSADADEALSPAPTQDTALPEKAATAPGDDLDFGDLSFDTAPAAAEPPAPAAPDAEF
GDFGDFDFNEETVAAPPKEQPAGDEIDFGEVSLDQAPVPAKEEQAVPAAADAFDFGEFSFDEETPLVKEESPAPAAADAF
EFGEFSFDESAPATKEEPQAPAAADSLDFGEFSFEEGAGTPEPAVPAAAQSLDFGELSFDETPSAAKEETAEPAGPSHDF
GEFSFEEEAGTPQPEAPASAAGAGAGFGEFSFEEEAAPAEEKPAVAAATMDFGEFSFEEEAAGPKETAAAEPVAPGQPSP
AEPDEEFSFGELSFGEEAEPEPASKPAAGPVVGAALAGAALAGAAGLAAAGKAKDAAPAAPAAPVSAQPPKAAASPLDFH
FGEQPPDVAPGEFAEDELPPLSIISRRKGRSVFTIAIVAISVIVVLALSAAGLYVLQSGPAALQKLDKMGIGFVAKWFGM
EVPEEGRITIRNPLASFHQNPQAGELFVVTGEAVNSFRKSRASIQVRVSLYDKSGKVLMQKTAYCGNRLSKEQLTTLPLE
KLESIMNNQFGDSLSNLGVKPGQPIGFVVAIANVPKEAADFGVEVVGSTVAAGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71421; Mature: 71421

Theoretical pI: Translated: 3.85; Mature: 3.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILQCDQCNTKFRLDDSKLKPGGVKVRCSKCRHVFVAGAEQKQEESEFDALLSGLGAPAA
CEEECCCCCCEEEECCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCHH
AAAATEAPAPAAEKVANDMATVEAGVKPQQPEESDGFGLGDFDFSADADEALSPAPTQDT
HHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
ALPEKAATAPGDDLDFGDLSFDTAPAAAEPPAPAAPDAEFGDFGDFDFNEETVAAPPKEQ
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAGDEIDFGEVSLDQAPVPAKEEQAVPAAADAFDFGEFSFDEETPLVKEESPAPAAADAF
CCCCCCCCCCEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
EFGEFSFDESAPATKEEPQAPAAADSLDFGEFSFEEGAGTPEPAVPAAAQSLDFGELSFD
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCC
ETPSAAKEETAEPAGPSHDFGEFSFEEEAGTPQPEAPASAAGAGAGFGEFSFEEEAAPAE
CCCCHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC
EKPAVAAATMDFGEFSFEEEAAGPKETAAAEPVAPGQPSPAEPDEEFSFGELSFGEEAEP
CCCCEEEEEECCCCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPASKPAAGPVVGAALAGAALAGAAGLAAAGKAKDAAPAAPAAPVSAQPPKAAASPLDFH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FGEQPPDVAPGEFAEDELPPLSIISRRKGRSVFTIAIVAISVIVVLALSAAGLYVLQSGP
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCEEEEECCH
AALQKLDKMGIGFVAKWFGMEVPEEGRITIRNPLASFHQNPQAGELFVVTGEAVNSFRKS
HHHHHHHHHCHHHHHHHHCCCCCCCCCEEEECCHHHHHCCCCCCEEEEEEHHHHHHHHHC
RASIQVRVSLYDKSGKVLMQKTAYCGNRLSKEQLTTLPLEKLESIMNNQFGDSLSNLGVK
CCEEEEEEEEECCCCCEEEHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHCCCC
PGQPIGFVVAIANVPKEAADFGVEVVGSTVAAGQ
CCCCCEEEEEECCCCHHHHHCCHHHHHCHHCCCC
>Mature Secondary Structure
MILQCDQCNTKFRLDDSKLKPGGVKVRCSKCRHVFVAGAEQKQEESEFDALLSGLGAPAA
CEEECCCCCCEEEECCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCHH
AAAATEAPAPAAEKVANDMATVEAGVKPQQPEESDGFGLGDFDFSADADEALSPAPTQDT
HHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
ALPEKAATAPGDDLDFGDLSFDTAPAAAEPPAPAAPDAEFGDFGDFDFNEETVAAPPKEQ
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAGDEIDFGEVSLDQAPVPAKEEQAVPAAADAFDFGEFSFDEETPLVKEESPAPAAADAF
CCCCCCCCCCEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
EFGEFSFDESAPATKEEPQAPAAADSLDFGEFSFEEGAGTPEPAVPAAAQSLDFGELSFD
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCC
ETPSAAKEETAEPAGPSHDFGEFSFEEEAGTPQPEAPASAAGAGAGFGEFSFEEEAAPAE
CCCCHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC
EKPAVAAATMDFGEFSFEEEAAGPKETAAAEPVAPGQPSPAEPDEEFSFGELSFGEEAEP
CCCCEEEEEECCCCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPASKPAAGPVVGAALAGAALAGAAGLAAAGKAKDAAPAAPAAPVSAQPPKAAASPLDFH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FGEQPPDVAPGEFAEDELPPLSIISRRKGRSVFTIAIVAISVIVVLALSAAGLYVLQSGP
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCEEEEECCH
AALQKLDKMGIGFVAKWFGMEVPEEGRITIRNPLASFHQNPQAGELFVVTGEAVNSFRKS
HHHHHHHHHCHHHHHHHHCCCCCCCCCEEEECCHHHHHCCCCCCEEEEEEHHHHHHHHHC
RASIQVRVSLYDKSGKVLMQKTAYCGNRLSKEQLTTLPLEKLESIMNNQFGDSLSNLGVK
CCEEEEEEEEECCCCCEEEHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHCCCC
PGQPIGFVVAIANVPKEAADFGVEVVGSTVAAGQ
CCCCCEEEEEECCCCHHHHHCCHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA