| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is cysU [H]
Identifier: 197118122
GI number: 197118122
Start: 2001611
End: 2002441
Strand: Direct
Name: cysU [H]
Synonym: Gbem_1737
Alternate gene names: 197118122
Gene position: 2001611-2002441 (Clockwise)
Preceding gene: 197118117
Following gene: 197118123
Centisome position: 43.37
GC content: 61.37
Gene sequence:
>831_bases ATGTCCTGGTCAAGCGGGAAAAATAACGTACTACCCGGTTTCACCCCGGCACTCGGGTATACCGTCTTCTACCTGAGCCT CATCGTCCTCATCCCCCTTTCCGCACTCTTCTTCAAGACCTCGACCCTTTCCTGGGACGACTTCGTCACTGCCGTGAGCG CGCCTCGGGTGCTTGCTTCCTACCGCGTCACCTTCGGGGCTTCGCTCGCCGCTGCTGTCGTCAACGGCTTCTTCGGCGTT CTGGTCGCCTGGGTGCTGGTGCGCTACCGCTTCCCCGGCAAGAAGCTCATCGACGCGCTGGTCGATCTTCCCTTCGCCCT CCCCACGGCGGTAGCAGGCATCACCCTGGCAAGCATCTATTCCTCGAACGGCTGGCTCGGGCGCTACCTGGAGCCGCGCG GGATCAAGATCGCCTTCACTCCTCTGGGCATCATCATCGCCATGATCTTCATCGGCCTTCCTTTCGTGGTCCGCACGGTG CAGCCGGTCCTGGAAGAGCTGGACCACGAAATCGAGGAAGCCGCCTCCTGTCTGGGAGCCGGCCGCTGGCAGACCTTCCG CAGGGTGCTGCTGCCGACCATGCTTCCGGCCATACTGACCGGGTTCGCACTGGCGTTCGCCCGGGCAGTGGGGGAGTACG GCTCCATCATCTTCATCGCGGGGAACATGCCGATGGTCTCCGAGATAACGCCGCTGCTCATCATCACCAAGCTGGAGCAG TACGATTACGCGGGCGCTACCGCCATCGCGACCGTAATGCTCGTGGTGTCGTTTCTGATGCTTCTTTGCATCAATCTTTT GCAGAAGTGGAGCAGGCGTTTCGCGGATTAG
Upstream 100 bases:
>100_bases CTTGACAAAAGGACTGCGGTGGTGGTAGGTTTTGTCCACTAATTCGATGGGGTAACCATTTCGACCATCGGCTTTAGCTG CAAAGAACGGAGGAGGGGAC
Downstream 100 bases:
>100_bases GGGCGTAGCCTCGGGAGGGACGGAAGATGCAGGTAGGCAGGGTATCGAAAAAGGAAAAACAAAGAGGAGGGGGGAGCACC TCGGAACCCGCGTGGGTGCG
Product: sulfate ABC transporter membrane protein CysU
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSWSSGKNNVLPGFTPALGYTVFYLSLIVLIPLSALFFKTSTLSWDDFVTAVSAPRVLASYRVTFGASLAAAVVNGFFGV LVAWVLVRYRFPGKKLIDALVDLPFALPTAVAGITLASIYSSNGWLGRYLEPRGIKIAFTPLGIIIAMIFIGLPFVVRTV QPVLEELDHEIEEAASCLGAGRWQTFRRVLLPTMLPAILTGFALAFARAVGEYGSIIFIAGNMPMVSEITPLLIITKLEQ YDYAGATAIATVMLVVSFLMLLCINLLQKWSRRFAD
Sequences:
>Translated_276_residues MSWSSGKNNVLPGFTPALGYTVFYLSLIVLIPLSALFFKTSTLSWDDFVTAVSAPRVLASYRVTFGASLAAAVVNGFFGV LVAWVLVRYRFPGKKLIDALVDLPFALPTAVAGITLASIYSSNGWLGRYLEPRGIKIAFTPLGIIIAMIFIGLPFVVRTV QPVLEELDHEIEEAASCLGAGRWQTFRRVLLPTMLPAILTGFALAFARAVGEYGSIIFIAGNMPMVSEITPLLIITKLEQ YDYAGATAIATVMLVVSFLMLLCINLLQKWSRRFAD >Mature_275_residues SWSSGKNNVLPGFTPALGYTVFYLSLIVLIPLSALFFKTSTLSWDDFVTAVSAPRVLASYRVTFGASLAAAVVNGFFGVL VAWVLVRYRFPGKKLIDALVDLPFALPTAVAGITLASIYSSNGWLGRYLEPRGIKIAFTPLGIIIAMIFIGLPFVVRTVQ PVLEELDHEIEEAASCLGAGRWQTFRRVLLPTMLPAILTGFALAFARAVGEYGSIIFIAGNMPMVSEITPLLIITKLEQY DYAGATAIATVMLVVSFLMLLCINLLQKWSRRFAD
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=268, Percent_Identity=52.2388059701493, Blast_Score=258, Evalue=2e-70, Organism=Escherichia coli, GI87082099, Length=251, Percent_Identity=33.0677290836653, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1786980, Length=200, Percent_Identity=36, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1786254, Length=225, Percent_Identity=27.5555555555556, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787369, Length=162, Percent_Identity=32.0987654320988, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787368, Length=232, Percent_Identity=26.7241379310345, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30110; Mature: 29979
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWSSGKNNVLPGFTPALGYTVFYLSLIVLIPLSALFFKTSTLSWDDFVTAVSAPRVLAS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YRVTFGASLAAAVVNGFFGVLVAWVLVRYRFPGKKLIDALVDLPFALPTAVAGITLASIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH SSNGWLGRYLEPRGIKIAFTPLGIIIAMIFIGLPFVVRTVQPVLEELDHEIEEAASCLGA CCCCCEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GRWQTFRRVLLPTMLPAILTGFALAFARAVGEYGSIIFIAGNMPMVSEITPLLIITKLEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH YDYAGATAIATVMLVVSFLMLLCINLLQKWSRRFAD HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SWSSGKNNVLPGFTPALGYTVFYLSLIVLIPLSALFFKTSTLSWDDFVTAVSAPRVLAS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YRVTFGASLAAAVVNGFFGVLVAWVLVRYRFPGKKLIDALVDLPFALPTAVAGITLASIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH SSNGWLGRYLEPRGIKIAFTPLGIIIAMIFIGLPFVVRTVQPVLEELDHEIEEAASCLGA CCCCCEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GRWQTFRRVLLPTMLPAILTGFALAFARAVGEYGSIIFIAGNMPMVSEITPLLIITKLEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH YDYAGATAIATVMLVVSFLMLLCINLLQKWSRRFAD HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]