| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117254
Identifier: 197117254
GI number: 197117254
Start: 1018021
End: 1018968
Strand: Direct
Name: 197117254
Synonym: Gbem_0862
Alternate gene names: NA
Gene position: 1018021-1018968 (Clockwise)
Preceding gene: 197117253
Following gene: 308535199
Centisome position: 22.06
GC content: 64.14
Gene sequence:
>948_bases GTGAAGAAATACCGCCCGCTCGATTTCTCAGGTGTCAGCACCTACCCCCTCGCCACGCGGAAGAACAAGATGAACGTCAA GGACGACTTCGCCCTGCCGGTGCGGCCGGGGATGACTGTAGCCGACCTGTTGGCCGCGATGCCGAACCAGTTGGGCTCCC AGTCCCTGAACCGGGTGATCGACGCCGTGGTCGCGGCGCGCCGGAAGGGGAAGCCGGTGGTGATGGCGATGGGGGGGCAC GTCATCAAGTGCGGGCTGCAGCCGGTGCTTAAATCGTTGATCGAGGCGGGCGTCGTTACCGCAGTGGCACTCAACGGTGC CGGTTCCATCCACGACTTCGAGATCGCCCTCATCGGCGCCACCAGCGAGGATGTGGGGGCCGTGCTCCACGCGGGGAACT TCGGCATGGCCGAGGAGACCGGGAGTCAGATCAACGAGGCGCTCAAGAAAGGGGTGGCCCAGGGGATGGGCCACGGCGAG TCGTTAGGGAGTATGATCCTGGAGCGCGAGCTCCCTTACCGCGAGCAGAGCCTCATGGCCACTTGCGTCAAGAACGGGAT CCCCGTCACCGTGCACGTCGCCATCGGCACCGACATCACGCACCAGCACCCGTCCGCCGACGGGGCCGTCTTGGGGGCGG CGAGTTTCACCGATTTCCGCACCTTCGCCTCCGTCGTCTCAGAGCTTGGCGACGGCGGGGTCTATCTGAACATCGGGAGC GCTGTGCTCCTTCCCGAGGTGTTTTTGAAGGCGCTCTCCATAGCGCAGAACCTCGGGCATCACGTCGATCACTTCACCAC CGCGAACTTCGACATGCAGCAGCACTACCGTCCTCTCACCAACGTGGTGAAGCGTCCCACCTCCGGTGAGAGCCGCGGCT ACACCGTCACCGGCCACCACGAGATCATGATCCCCCTTCTGGCTGCGGGGATACTGGATAGGATCTAG
Upstream 100 bases:
>100_bases TCTACAAGGTCTAGAAGGGGCATTCTCCCAGGGGCGCGTTCGGTGGCCAGCCGAAGTTCCGGAGTTGGCAGCCGGCGCTA AAATGCGAAAAGGATAGCTC
Downstream 100 bases:
>100_bases AACCCGTTCAAGGTTCAACGTTCAACGTTCAGATTGTTCCTCCTTTATATTGTCGCATGATGCGTGACGGGAGAATCTGA AGCAAACCTGTTCCAATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKKYRPLDFSGVSTYPLATRKNKMNVKDDFALPVRPGMTVADLLAAMPNQLGSQSLNRVIDAVVAARRKGKPVVMAMGGH VIKCGLQPVLKSLIEAGVVTAVALNGAGSIHDFEIALIGATSEDVGAVLHAGNFGMAEETGSQINEALKKGVAQGMGHGE SLGSMILERELPYREQSLMATCVKNGIPVTVHVAIGTDITHQHPSADGAVLGAASFTDFRTFASVVSELGDGGVYLNIGS AVLLPEVFLKALSIAQNLGHHVDHFTTANFDMQQHYRPLTNVVKRPTSGESRGYTVTGHHEIMIPLLAAGILDRI
Sequences:
>Translated_315_residues MKKYRPLDFSGVSTYPLATRKNKMNVKDDFALPVRPGMTVADLLAAMPNQLGSQSLNRVIDAVVAARRKGKPVVMAMGGH VIKCGLQPVLKSLIEAGVVTAVALNGAGSIHDFEIALIGATSEDVGAVLHAGNFGMAEETGSQINEALKKGVAQGMGHGE SLGSMILERELPYREQSLMATCVKNGIPVTVHVAIGTDITHQHPSADGAVLGAASFTDFRTFASVVSELGDGGVYLNIGS AVLLPEVFLKALSIAQNLGHHVDHFTTANFDMQQHYRPLTNVVKRPTSGESRGYTVTGHHEIMIPLLAAGILDRI >Mature_315_residues MKKYRPLDFSGVSTYPLATRKNKMNVKDDFALPVRPGMTVADLLAAMPNQLGSQSLNRVIDAVVAARRKGKPVVMAMGGH VIKCGLQPVLKSLIEAGVVTAVALNGAGSIHDFEIALIGATSEDVGAVLHAGNFGMAEETGSQINEALKKGVAQGMGHGE SLGSMILERELPYREQSLMATCVKNGIPVTVHVAIGTDITHQHPSADGAVLGAASFTDFRTFASVVSELGDGGVYLNIGS AVLLPEVFLKALSIAQNLGHHVDHFTTANFDMQQHYRPLTNVVKRPTSGESRGYTVTGHHEIMIPLLAAGILDRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33381; Mature: 33381
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYRPLDFSGVSTYPLATRKNKMNVKDDFALPVRPGMTVADLLAAMPNQLGSQSLNRVI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DAVVAARRKGKPVVMAMGGHVIKCGLQPVLKSLIEAGVVTAVALNGAGSIHDFEIALIGA HHHHHHHHCCCCEEEECCCEEEECCHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEC TSEDVGAVLHAGNFGMAEETGSQINEALKKGVAQGMGHGESLGSMILERELPYREQSLMA CCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH TCVKNGIPVTVHVAIGTDITHQHPSADGAVLGAASFTDFRTFASVVSELGDGGVYLNIGS HHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEECC AVLLPEVFLKALSIAQNLGHHVDHFTTANFDMQQHYRPLTNVVKRPTSGESRGYTVTGHH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCH EIMIPLLAAGILDRI HHHHHHHHHHHHHCC >Mature Secondary Structure MKKYRPLDFSGVSTYPLATRKNKMNVKDDFALPVRPGMTVADLLAAMPNQLGSQSLNRVI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DAVVAARRKGKPVVMAMGGHVIKCGLQPVLKSLIEAGVVTAVALNGAGSIHDFEIALIGA HHHHHHHHCCCCEEEECCCEEEECCHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEC TSEDVGAVLHAGNFGMAEETGSQINEALKKGVAQGMGHGESLGSMILERELPYREQSLMA CCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH TCVKNGIPVTVHVAIGTDITHQHPSADGAVLGAASFTDFRTFASVVSELGDGGVYLNIGS HHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEECC AVLLPEVFLKALSIAQNLGHHVDHFTTANFDMQQHYRPLTNVVKRPTSGESRGYTVTGHH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCH EIMIPLLAAGILDRI HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA