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The map label for this gene is ddhC [H]

Identifier: 197117249

GI number: 197117249

Start: 1012441

End: 1013790

Strand: Direct

Name: ddhC [H]

Synonym: Gbem_0857

Alternate gene names: 197117249

Gene position: 1012441-1013790 (Clockwise)

Preceding gene: 308535198

Following gene: 197117250

Centisome position: 21.94

GC content: 62.0

Gene sequence:

>1350_bases
ATGGAAACAGCCAAAGACAAAGAAAAGATCCTGAGGGAAAAGGCCATCGCTGCCGCAGTCGAATACTACCGGTTTCGGCA
TGCCGACAAGAAGCCCTTCGCCGCCGGTGATCGCGTGCCTTACGCCGGGCGGATCTTTGACGAACGGGAGATAACCGCGC
TCACCGACGCTTCCCTCGATTTCTGGCTGACTGCCGGTAGATACGCGGAGAAATTCGAGAGGGAGTTCGCCGATTACCTC
GGGGTGCAGCACTGTTCGCTGACCAACTCAGGCTCCTCGGCGAACCTGCTGGCCTTCATGGCGCTCACCTCCCCCCTGCT
GGGCGACCGCCAGGTGCGCCGCGGCGATGAAGTGATCACCGTGGCCGCAGGGTTCCCCACCACTGTGGCCCCGCTGATCC
AGTACGGCGCCGTACCGGTTTTCGTGGATGTCACCTTCCCCACCTACAACATCGACTGCTCCATGCTGGAAAGCGCCCTC
TCCGAGAAGACCAGGGCGGTGATGATCGCGCACACCCTGGGAAACCCCTTCGATCTGCAGAAGGTCCGGGCGTTCTGCGA
CCGCCACGGCCTGTGGCTCATCGAGGACAACTGCGATGCACTCGGCTCCCGCTATTTCCACCGCGGCGAGTGGCGCCACA
CCGGGACCATCGGGCACCTGGGGACTTCCAGCTTCTATCCGCCACACCACATGACCATGGGGGAGGGTGGAGCGGTCTAC
ACCGACGACACCACGCTAAAGCGGGTGGTCGAATCGCTGCGCGACTGGGGGCGTGACTGCTGGTGCCCCTCCGGCCGTGA
CAATACCTGCGGCAAGCGCTTCACTCAGCAGTTCGGCGAGCTCCCCTATGGCTACGACCACAAATATGTCTATTCGCATT
TCGGCTACAACCTGAAGGTGACCGAGATGCAGGCCGCCATCGGCTGTGCCCAGCTCGATAAGCTCGGAGGATTCGGCGCC
GCGCGGAGACGGAACTGGCAGTTACTGCGCGATGGGCTCGCCGACCTCGAAGGCCGGTTCATACTCCCGGAGCCCACGGA
AAACTCGGACCCCTCCTGGTTCGGCTTTCTCTTGACCGTTCGGCCCGATGCGGGCCTGAACCGCGACCAGATCGTCACCC
ACCTGGAGCGGGGCGGCATCCAGACCAGGATGCTCTTTGCCGGGAACCTGATCAAGCACCCCTGTTTCGACGAGATGAGG
AAAAGCGGCACAGGCTATAGGGTGGCTGGGTCTCTTGCCAACACCGACCGGATCATGAACGACACCTTATGGATCGGCGT
CTATCCGGGGATGACGGAAGCCATGCTCGCGCAGATGATCGAGAAAATCAGGGAAGTTGCTGGGGCATGA

Upstream 100 bases:

>100_bases
CGACGAGGACCTGCGCGAGGTTTGTTTTCAACAGATAACGGCATACGCCGGGAGCTGAAGCGCGAAAACCTGCATTGAAG
TGCAAGCAAACGAGGGGTGA

Downstream 100 bases:

>100_bases
AGATCCTCGTCACCGGTGCGACCGGTTTCCTGGGAAGCCGTCTGGTAGAAGCCCTGCTCCGACAGGGGCACCAGGTCATC
GTCTTGAAGCGCAGTTTTTC

Product: CDP-4-dehydro-6-deoxyglucose dehydratase/reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
METAKDKEKILREKAIAAAVEYYRFRHADKKPFAAGDRVPYAGRIFDEREITALTDASLDFWLTAGRYAEKFEREFADYL
GVQHCSLTNSGSSANLLAFMALTSPLLGDRQVRRGDEVITVAAGFPTTVAPLIQYGAVPVFVDVTFPTYNIDCSMLESAL
SEKTRAVMIAHTLGNPFDLQKVRAFCDRHGLWLIEDNCDALGSRYFHRGEWRHTGTIGHLGTSSFYPPHHMTMGEGGAVY
TDDTTLKRVVESLRDWGRDCWCPSGRDNTCGKRFTQQFGELPYGYDHKYVYSHFGYNLKVTEMQAAIGCAQLDKLGGFGA
ARRRNWQLLRDGLADLEGRFILPEPTENSDPSWFGFLLTVRPDAGLNRDQIVTHLERGGIQTRMLFAGNLIKHPCFDEMR
KSGTGYRVAGSLANTDRIMNDTLWIGVYPGMTEAMLAQMIEKIREVAGA

Sequences:

>Translated_449_residues
METAKDKEKILREKAIAAAVEYYRFRHADKKPFAAGDRVPYAGRIFDEREITALTDASLDFWLTAGRYAEKFEREFADYL
GVQHCSLTNSGSSANLLAFMALTSPLLGDRQVRRGDEVITVAAGFPTTVAPLIQYGAVPVFVDVTFPTYNIDCSMLESAL
SEKTRAVMIAHTLGNPFDLQKVRAFCDRHGLWLIEDNCDALGSRYFHRGEWRHTGTIGHLGTSSFYPPHHMTMGEGGAVY
TDDTTLKRVVESLRDWGRDCWCPSGRDNTCGKRFTQQFGELPYGYDHKYVYSHFGYNLKVTEMQAAIGCAQLDKLGGFGA
ARRRNWQLLRDGLADLEGRFILPEPTENSDPSWFGFLLTVRPDAGLNRDQIVTHLERGGIQTRMLFAGNLIKHPCFDEMR
KSGTGYRVAGSLANTDRIMNDTLWIGVYPGMTEAMLAQMIEKIREVAGA
>Mature_449_residues
METAKDKEKILREKAIAAAVEYYRFRHADKKPFAAGDRVPYAGRIFDEREITALTDASLDFWLTAGRYAEKFEREFADYL
GVQHCSLTNSGSSANLLAFMALTSPLLGDRQVRRGDEVITVAAGFPTTVAPLIQYGAVPVFVDVTFPTYNIDCSMLESAL
SEKTRAVMIAHTLGNPFDLQKVRAFCDRHGLWLIEDNCDALGSRYFHRGEWRHTGTIGHLGTSSFYPPHHMTMGEGGAVY
TDDTTLKRVVESLRDWGRDCWCPSGRDNTCGKRFTQQFGELPYGYDHKYVYSHFGYNLKVTEMQAAIGCAQLDKLGGFGA
ARRRNWQLLRDGLADLEGRFILPEPTENSDPSWFGFLLTVRPDAGLNRDQIVTHLERGGIQTRMLFAGNLIKHPCFDEMR
KSGTGYRVAGSLANTDRIMNDTLWIGVYPGMTEAMLAQMIEKIREVAGA

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=412, Percent_Identity=26.2135922330097, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI2367285, Length=253, Percent_Identity=30.4347826086957, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 50364; Mature: 50364

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METAKDKEKILREKAIAAAVEYYRFRHADKKPFAAGDRVPYAGRIFDEREITALTDASLD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
FWLTAGRYAEKFEREFADYLGVQHCSLTNSGSSANLLAFMALTSPLLGDRQVRRGDEVIT
EEEECCHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEE
VAAGFPTTVAPLIQYGAVPVFVDVTFPTYNIDCSMLESALSEKTRAVMIAHTLGNPFDLQ
EECCCCHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCHH
KVRAFCDRHGLWLIEDNCDALGSRYFHRGEWRHTGTIGHLGTSSFYPPHHMTMGEGGAVY
HHHHHHHHCCEEEEECCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEE
TDDTTLKRVVESLRDWGRDCWCPSGRDNTCGKRFTQQFGELPYGYDHKYVYSHFGYNLKV
ECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEHHHCCCCEEE
TEMQAAIGCAQLDKLGGFGAARRRNWQLLRDGLADLEGRFILPEPTENSDPSWFGFLLTV
EHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEEE
RPDAGLNRDQIVTHLERGGIQTRMLFAGNLIKHPCFDEMRKSGTGYRVAGSLANTDRIMN
CCCCCCCHHHHHHHHHHCCCEEEEEECCCHHCCCCHHHHHHCCCCEEEECCHHCCHHHHC
DTLWIGVYPGMTEAMLAQMIEKIREVAGA
CEEEEEECCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
METAKDKEKILREKAIAAAVEYYRFRHADKKPFAAGDRVPYAGRIFDEREITALTDASLD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
FWLTAGRYAEKFEREFADYLGVQHCSLTNSGSSANLLAFMALTSPLLGDRQVRRGDEVIT
EEEECCHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEE
VAAGFPTTVAPLIQYGAVPVFVDVTFPTYNIDCSMLESALSEKTRAVMIAHTLGNPFDLQ
EECCCCHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCHH
KVRAFCDRHGLWLIEDNCDALGSRYFHRGEWRHTGTIGHLGTSSFYPPHHMTMGEGGAVY
HHHHHHHHCCEEEEECCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEE
TDDTTLKRVVESLRDWGRDCWCPSGRDNTCGKRFTQQFGELPYGYDHKYVYSHFGYNLKV
ECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEHHHCCCCEEE
TEMQAAIGCAQLDKLGGFGAARRRNWQLLRDGLADLEGRFILPEPTENSDPSWFGFLLTV
EHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEEE
RPDAGLNRDQIVTHLERGGIQTRMLFAGNLIKHPCFDEMRKSGTGYRVAGSLANTDRIMN
CCCCCCCHHHHHHHHHHCCCEEEEEECCCHHCCCCHHHHHHCCCCEEEECCHHCCHHHHC
DTLWIGVYPGMTEAMLAQMIEKIREVAGA
CEEEEEECCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]