Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117222

Identifier: 197117222

GI number: 197117222

Start: 980281

End: 981588

Strand: Reverse

Name: 197117222

Synonym: Gbem_0830

Alternate gene names: NA

Gene position: 981588-980281 (Counterclockwise)

Preceding gene: 197117226

Following gene: 197117221

Centisome position: 21.27

GC content: 62.08

Gene sequence:

>1308_bases
ATGCCGCACCTAAACCGTCACAACGCATACAGCTCACTGATGGAGCGCCTGAACCGATTCCCTCAAGGCGCTCCACCCTC
CGAATTGCTCACCAAGATCCTCGCCCTGCTATTCACTGAGAAAGAGGCGAAACTGGTGGGGCAGCTACCCATGCATCCGT
TCTCCCCCGCCAAGGCGGCGGAGATCTGGAGGGTGAGGGAAGTTGAGGCATTCCGCACGCTCGAAGATTTGGCTAAACGA
GCGCTGCTACTGGATGCCGAGCACGACGGCGAGAAGCTCTACGTGCTCCCCCCGCCGATGGCGGGCTTCTTCGAGTTTTC
TCTGATGCGGGTCAGAGCGGATATCGACCAGGCGGCGCTGAGCCTGCTCCTGTACCAGTACCTGAACCAGGAGCAGGAGT
TCATCAGCAGGCTGTTCATAGAGGGGAGAACCAGGATCGGCAGGATCATGGTCGGCGAGAACGAGGTCCCCCCCGCGCAC
ATCACCCGGGTCTACAACTACGAGCGCGCCAGCGAGGTGATCAAAGAGGCGAAGAAGATCGGTGTGGGCACCTGCTACTG
CCGCCATAAGATGCAGCACCTCGGGCGCGCCTGCGCGGCGCCGATGGAGACCTGCATGGTTTTCGGGCCGGTGGCGGACT
CGCTGATCAGGCACGGCCACGCTCGCGCCATCGACAGCGTCAAATGCCTGGACCTGCTGCAGCAGGCGCGGGAGCATAAC
CTGGTCCAGTTCGGGGAGAACGTGCAGGGAGGTCTTTCCTTCATCTGCAACTGCTGCAGCTGCTGCTGCGAAGCGCTGAT
AGCAGCCCGCAAGTTCTGCAACGTGCAGCCAGTGCACAGTACCAATTTCATAGCGGAATTAACCGCCACCGAATGCAGCG
GCTGCGGCCGGTGCATCGATGCCTGCCCCGCTGAAGCGGTGCGGCTCATATCTGCCAACGCCCCCCAGCACCCGTGGCTC
AGGAGATGCGTGCAAGACAGCGAACGCTGCCTGGGATGCGGAGTCTGCGTCAGGGTCTGCCGCAGCGCGGCGATCACGTT
GAAACCAAGGGCTGAGCGGGTCATTACCCCGGTCGACAGCGCCCACCGTATCGTGCTGATGGCGCTTGAGCAGGGCAAGC
TGCAGCATCTCATCTGGGACAACCGCGCGCTCGTCAGCCACCGCGCCATGGCCGCCATCGTGGGCGCCATCCTTAAACTT
CCTCCGGTGAAACAGGCCCTGGTCCGCAGCCAGCTCGGTTCGCACTACCTGCAAGGGGTGATCGAAAGGCACGCAGAGCG
ATCCAGCAAGACCTGTTACAGATACTGA

Upstream 100 bases:

>100_bases
AGCGAGCATACTCTCACCATCGATGCTTAATGTCACAAACTTCCGCGGCTGCGGAGTTCTGTGTTCACTCCTGCAGCAAC
CGCGTCATCGGAGAGCGTCT

Downstream 100 bases:

>100_bases
TTAACGCTTTACTCCTTAGGCTTTCTCAGAAGTCCTCAGACGTTCTCCTTGCCAATGGTTTTAAATGGCGGCGCAGTCAT
ATTCTGCGGCGCCACTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Ferredoxin; 4Fe-4S Ferredoxin

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MPHLNRHNAYSSLMERLNRFPQGAPPSELLTKILALLFTEKEAKLVGQLPMHPFSPAKAAEIWRVREVEAFRTLEDLAKR
ALLLDAEHDGEKLYVLPPPMAGFFEFSLMRVRADIDQAALSLLLYQYLNQEQEFISRLFIEGRTRIGRIMVGENEVPPAH
ITRVYNYERASEVIKEAKKIGVGTCYCRHKMQHLGRACAAPMETCMVFGPVADSLIRHGHARAIDSVKCLDLLQQAREHN
LVQFGENVQGGLSFICNCCSCCCEALIAARKFCNVQPVHSTNFIAELTATECSGCGRCIDACPAEAVRLISANAPQHPWL
RRCVQDSERCLGCGVCVRVCRSAAITLKPRAERVITPVDSAHRIVLMALEQGKLQHLIWDNRALVSHRAMAAIVGAILKL
PPVKQALVRSQLGSHYLQGVIERHAERSSKTCYRY

Sequences:

>Translated_435_residues
MPHLNRHNAYSSLMERLNRFPQGAPPSELLTKILALLFTEKEAKLVGQLPMHPFSPAKAAEIWRVREVEAFRTLEDLAKR
ALLLDAEHDGEKLYVLPPPMAGFFEFSLMRVRADIDQAALSLLLYQYLNQEQEFISRLFIEGRTRIGRIMVGENEVPPAH
ITRVYNYERASEVIKEAKKIGVGTCYCRHKMQHLGRACAAPMETCMVFGPVADSLIRHGHARAIDSVKCLDLLQQAREHN
LVQFGENVQGGLSFICNCCSCCCEALIAARKFCNVQPVHSTNFIAELTATECSGCGRCIDACPAEAVRLISANAPQHPWL
RRCVQDSERCLGCGVCVRVCRSAAITLKPRAERVITPVDSAHRIVLMALEQGKLQHLIWDNRALVSHRAMAAIVGAILKL
PPVKQALVRSQLGSHYLQGVIERHAERSSKTCYRY
>Mature_434_residues
PHLNRHNAYSSLMERLNRFPQGAPPSELLTKILALLFTEKEAKLVGQLPMHPFSPAKAAEIWRVREVEAFRTLEDLAKRA
LLLDAEHDGEKLYVLPPPMAGFFEFSLMRVRADIDQAALSLLLYQYLNQEQEFISRLFIEGRTRIGRIMVGENEVPPAHI
TRVYNYERASEVIKEAKKIGVGTCYCRHKMQHLGRACAAPMETCMVFGPVADSLIRHGHARAIDSVKCLDLLQQAREHNL
VQFGENVQGGLSFICNCCSCCCEALIAARKFCNVQPVHSTNFIAELTATECSGCGRCIDACPAEAVRLISANAPQHPWLR
RCVQDSERCLGCGVCVRVCRSAAITLKPRAERVITPVDSAHRIVLMALEQGKLQHLIWDNRALVSHRAMAAIVGAILKLP
PVKQALVRSQLGSHYLQGVIERHAERSSKTCYRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48687; Mature: 48556

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHLNRHNAYSSLMERLNRFPQGAPPSELLTKILALLFTEKEAKLVGQLPMHPFSPAKAA
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHH
EIWRVREVEAFRTLEDLAKRALLLDAEHDGEKLYVLPPPMAGFFEFSLMRVRADIDQAAL
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
SLLLYQYLNQEQEFISRLFIEGRTRIGRIMVGENEVPPAHITRVYNYERASEVIKEAKKI
HHHHHHHHCHHHHHHHHHHHHCCHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GVGTCYCRHKMQHLGRACAAPMETCMVFGPVADSLIRHGHARAIDSVKCLDLLQQAREHN
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
LVQFGENVQGGLSFICNCCSCCCEALIAARKFCNVQPVHSTNFIAELTATECSGCGRCID
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHH
ACPAEAVRLISANAPQHPWLRRCVQDSERCLGCGVCVRVCRSAAITLKPRAERVITPVDS
HCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHCCCCCC
AHRIVLMALEQGKLQHLIWDNRALVSHRAMAAIVGAILKLPPVKQALVRSQLGSHYLQGV
CCEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IERHAERSSKTCYRY
HHHHHHHCCCCCCCC
>Mature Secondary Structure 
PHLNRHNAYSSLMERLNRFPQGAPPSELLTKILALLFTEKEAKLVGQLPMHPFSPAKAA
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHH
EIWRVREVEAFRTLEDLAKRALLLDAEHDGEKLYVLPPPMAGFFEFSLMRVRADIDQAAL
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
SLLLYQYLNQEQEFISRLFIEGRTRIGRIMVGENEVPPAHITRVYNYERASEVIKEAKKI
HHHHHHHHCHHHHHHHHHHHHCCHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GVGTCYCRHKMQHLGRACAAPMETCMVFGPVADSLIRHGHARAIDSVKCLDLLQQAREHN
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
LVQFGENVQGGLSFICNCCSCCCEALIAARKFCNVQPVHSTNFIAELTATECSGCGRCID
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHH
ACPAEAVRLISANAPQHPWLRRCVQDSERCLGCGVCVRVCRSAAITLKPRAERVITPVDS
HCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHCCCCCC
AHRIVLMALEQGKLQHLIWDNRALVSHRAMAAIVGAILKLPPVKQALVRSQLGSHYLQGV
CCEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IERHAERSSKTCYRY
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA