Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117206

Identifier: 197117206

GI number: 197117206

Start: 964402

End: 965328

Strand: Direct

Name: 197117206

Synonym: Gbem_0814

Alternate gene names: NA

Gene position: 964402-965328 (Clockwise)

Preceding gene: 197117202

Following gene: 197117207

Centisome position: 20.9

GC content: 62.14

Gene sequence:

>927_bases
ATGTCCAAACTCACTCATGAAGATCCTCGTTCCTCGAAAGCCACCTTCTGGCTGATACTGACCACCTTCTTCTGGGGGGG
CAGTTTCATCTTCAACAAGATCGGTTTCCGGGAGATCCCGCCGGTCACCTTTTTGTTCTTCCGCTTCGCCCTGGCCACGC
TGCTTATGGCGGCGATCTGCCTGCCGCGCCTGAAGCGCTTCAACCGGAATGTTCTGAGAAAGGGTCTTATCGTCGGAGCC
GCTCTTGCCGCCACCAACCTCTCCTTCGTCCTCGGGGTGAGCGGGACCAGCGTCTCTCGCGCCGGATTCCTTAACAACCT
GTTCGTGCTCATCATTCCCTTGCTTTGCTTCGCCTTCTGGCGCGAGCGCTTCGACCGCTGGACCGCGACCGGGCTCTTTC
TGGCCCTCGCCGGCCTGTGGCAGCTGGCCCAGGGCGGGGTGGAAGGGTTCAACAAGGGGGATCTGCTCTCCACCCTGTGC
GCGCTCTTCATCGCCCTGCACATCATTTCGGTGTCGAAGCTTTTGCGGGACGAAGACGTCTACCTGTTGAGCCTGGTGCA
ATTCGCCACGGTTACGGCGGTAGGGGGCCTGCTGTTCCTGGTGCTCCCGGCGCCTCCTTTTGCCATCGGCCCGGTCTCGG
GCGGGTCGCTCCTTTACTGCGCCATCTTCCCGACCGTGATCTGTTTCACCCTGCAAAACACCTATCAGCGCTACACCACC
CCCACCAAGGCTGGGCTCATCTACACCATGGACCCGGTCTGGAGCATGCTGGGGGGGACGCTGATCCTGGGGGAGCGGCT
GACCGCGGGGGAGTCGCTCGGCTGTTCCCTCATCTTTGCCTCCGTCGTCCTTCCCCTTTCGATCAAGCGCCTGCGTGAGC
GGCACCTGGGGATCGACTACCGCGCCGAGGGCGCAGCTGCTGAGTAG

Upstream 100 bases:

>100_bases
AAAAGCGGTCCGGCGCCGCCCCCCATGGACCCGGCAGGAACCAGTGGGATAGGGGCGCTATGGGGTTGACATGAACCCCA
ACCCTGGTCTTTAATAGGCG

Downstream 100 bases:

>100_bases
GCAGTATGCGCCGCAGGTCGCTTTGATTGACTTCACTACATTCTCGGATACGCTCGCGCAGGTATTTCATCGCGACTTTA
TAAGGAGGGGGCATGCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSKLTHEDPRSSKATFWLILTTFFWGGSFIFNKIGFREIPPVTFLFFRFALATLLMAAICLPRLKRFNRNVLRKGLIVGA
ALAATNLSFVLGVSGTSVSRAGFLNNLFVLIIPLLCFAFWRERFDRWTATGLFLALAGLWQLAQGGVEGFNKGDLLSTLC
ALFIALHIISVSKLLRDEDVYLLSLVQFATVTAVGGLLFLVLPAPPFAIGPVSGGSLLYCAIFPTVICFTLQNTYQRYTT
PTKAGLIYTMDPVWSMLGGTLILGERLTAGESLGCSLIFASVVLPLSIKRLRERHLGIDYRAEGAAAE

Sequences:

>Translated_308_residues
MSKLTHEDPRSSKATFWLILTTFFWGGSFIFNKIGFREIPPVTFLFFRFALATLLMAAICLPRLKRFNRNVLRKGLIVGA
ALAATNLSFVLGVSGTSVSRAGFLNNLFVLIIPLLCFAFWRERFDRWTATGLFLALAGLWQLAQGGVEGFNKGDLLSTLC
ALFIALHIISVSKLLRDEDVYLLSLVQFATVTAVGGLLFLVLPAPPFAIGPVSGGSLLYCAIFPTVICFTLQNTYQRYTT
PTKAGLIYTMDPVWSMLGGTLILGERLTAGESLGCSLIFASVVLPLSIKRLRERHLGIDYRAEGAAAE
>Mature_307_residues
SKLTHEDPRSSKATFWLILTTFFWGGSFIFNKIGFREIPPVTFLFFRFALATLLMAAICLPRLKRFNRNVLRKGLIVGAA
LAATNLSFVLGVSGTSVSRAGFLNNLFVLIIPLLCFAFWRERFDRWTATGLFLALAGLWQLAQGGVEGFNKGDLLSTLCA
LFIALHIISVSKLLRDEDVYLLSLVQFATVTAVGGLLFLVLPAPPFAIGPVSGGSLLYCAIFPTVICFTLQNTYQRYTTP
TKAGLIYTMDPVWSMLGGTLILGERLTAGESLGCSLIFASVVLPLSIKRLRERHLGIDYRAEGAAAE

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33772; Mature: 33641

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLTHEDPRSSKATFWLILTTFFWGGSFIFNKIGFREIPPVTFLFFRFALATLLMAAIC
CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LPRLKRFNRNVLRKGLIVGAALAATNLSFVLGVSGTSVSRAGFLNNLFVLIIPLLCFAFW
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
RERFDRWTATGLFLALAGLWQLAQGGVEGFNKGDLLSTLCALFIALHIISVSKLLRDEDV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
YLLSLVQFATVTAVGGLLFLVLPAPPFAIGPVSGGSLLYCAIFPTVICFTLQNTYQRYTT
HHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PTKAGLIYTMDPVWSMLGGTLILGERLTAGESLGCSLIFASVVLPLSIKRLRERHLGIDY
CCCCCEEEEECHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
RAEGAAAE
CCCCCCCC
>Mature Secondary Structure 
SKLTHEDPRSSKATFWLILTTFFWGGSFIFNKIGFREIPPVTFLFFRFALATLLMAAIC
CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LPRLKRFNRNVLRKGLIVGAALAATNLSFVLGVSGTSVSRAGFLNNLFVLIIPLLCFAFW
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
RERFDRWTATGLFLALAGLWQLAQGGVEGFNKGDLLSTLCALFIALHIISVSKLLRDEDV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
YLLSLVQFATVTAVGGLLFLVLPAPPFAIGPVSGGSLLYCAIFPTVICFTLQNTYQRYTT
HHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PTKAGLIYTMDPVWSMLGGTLILGERLTAGESLGCSLIFASVVLPLSIKRLRERHLGIDY
CCCCCEEEEECHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
RAEGAAAE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]