Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
---|---|
Accession | NC_011146 |
Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is guaB [H]
Identifier: 197117159
GI number: 197117159
Start: 899434
End: 900903
Strand: Direct
Name: guaB [H]
Synonym: Gbem_0764
Alternate gene names: 197117159
Gene position: 899434-900903 (Clockwise)
Preceding gene: 197117158
Following gene: 197117160
Centisome position: 19.49
GC content: 62.79
Gene sequence:
>1470_bases ATGTTAGAAAGCAGCCTCCCGGAAGGTCTTACCTTTGACGACGTTCTGCTCCTCCCTGCCCACTCGCTCATCCTCCCCCG CGATACCGATTTAAGCTCCAGACTCACCAACAACATCCAGTTGAACATCCCGCTGGTGAGTGCCGCCATGGACACTGTCA CAGAATCGAGGGCGGCTATCTGCATGGCGCGCGAAGGGGGTATCGGCTTCATCCACAAGAACCTCACCGTCGCCGAGCAG GCGATGGAAGTGGATAAGGTCAAGAAGAGCGAATCCGGGATGATCGTGGACCCGATCACCATGCGCCCCAACCAGCGCAT CCGGGAGGCTCTGGAGATGATGGCGAAGTACAGGATCTCCGGGGTGCCGATCACCAAGGCCAACGGCAAACTGGTAGGCA TACTGACCAACAGGGACCTTCGTTTCGAGACCAACCTGGACCTGCTCATCTCCGACCGCATGACCAAGAGGAACCTGGTC ACCGTGCCGGTCGGGACCACGCTGGAGCAGGCGAAAGAGCACCTGAAGCACACCAGGGTAGAGAAGCTTCTGGTGGTCGA CGGGGAGAAGAACCTCAAGGGGCTCATCACCATCAAGGACATCGAGAAGATCAAGAAGTACCCCAACGCCTGCAAGGACT CCCTCGGGCGCCTGCGGGTCGGTGCGGCAGTCGGCCCGACCCCGGACGTGGACGCGCGCATCGACGCTCTCCTGAAGGCG GGCGTGGACGTCGTGGTCATCGACACCGCCCACGGCCATTCCCAGGGGGTAATCGACACCATCGCCCGCATCAAATCCGA CTTCCCGGGGCTTGAGCTCGTGGCCGGCAACATCGCCACCGCCGACGCCGCCGAGGCGCTGATCAAGGCCGGCGTCGACG CCATCAAGGTCGGCATCGGACCGGGCTCCATCTGCACCACCCGCGTGGTCGCCGGCATCGGCGTTCCCCAGATCACCGCC ATCGCCGAGTGCTCCAGGGTAGCCAAGAAGCACGGCATACCGCTCATCGCCGACGGCGGCATCAAGTACTCCGGCGATCT CACCAAGGCCGTTGCCGCCGGCGCCGACGTCGTCATGATCGGTTCCCTCTTCGCAGGGACCGAAGAATCCCCGGGCGACA CCATCCTGTACCAGGGGCGCGCCTACAAGAGCTACCGCGGCATGGGCTCCATCGGCGCCATGAAGGAAGGGAGCAAGGAC CGCTACTTCCAAAGCGACGTCGACAGCGACGTCAAACTCGTACCCGAAGGGATCGAGGGGATGGTTCCGCTCAGGGGACC GCTTTCCGCCAACGTGCACCAGCTGATGGGCGGCCTGCGCGCCGGCATGGGCTACACCGGGAGCCGGACCATCGTCGAGC TGCAGCAAAACGGGCGTTTCGTCAGGATCACCGGCGCAGGCCTCAAAGAGTCCCACGTGCACGACGTCATGATCACCAAA GAAGCCCCGAACTACCGGGTGGAAAAATAA
Upstream 100 bases:
>100_bases GGGCCCTTGATTAGGCAAATTTCAGTTGACTTGGACTGCCCCTTGTAATAGGTTTTCCGGTTAATATCCCGCGCCCCAAA CAACAAAAGGAGTCTCCCTA
Downstream 100 bases:
>100_bases GGCGCAAGGAACCGGCTCACGCAAAGCCGCAAAGACGCAGAGAAAAGCTGGTTCGGCAGTACTTTGCGCCTTGGCGTCTT TGCGTGACAGCTTTTGACTT
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MLESSLPEGLTFDDVLLLPAHSLILPRDTDLSSRLTNNIQLNIPLVSAAMDTVTESRAAICMAREGGIGFIHKNLTVAEQ AMEVDKVKKSESGMIVDPITMRPNQRIREALEMMAKYRISGVPITKANGKLVGILTNRDLRFETNLDLLISDRMTKRNLV TVPVGTTLEQAKEHLKHTRVEKLLVVDGEKNLKGLITIKDIEKIKKYPNACKDSLGRLRVGAAVGPTPDVDARIDALLKA GVDVVVIDTAHGHSQGVIDTIARIKSDFPGLELVAGNIATADAAEALIKAGVDAIKVGIGPGSICTTRVVAGIGVPQITA IAECSRVAKKHGIPLIADGGIKYSGDLTKAVAAGADVVMIGSLFAGTEESPGDTILYQGRAYKSYRGMGSIGAMKEGSKD RYFQSDVDSDVKLVPEGIEGMVPLRGPLSANVHQLMGGLRAGMGYTGSRTIVELQQNGRFVRITGAGLKESHVHDVMITK EAPNYRVEK
Sequences:
>Translated_489_residues MLESSLPEGLTFDDVLLLPAHSLILPRDTDLSSRLTNNIQLNIPLVSAAMDTVTESRAAICMAREGGIGFIHKNLTVAEQ AMEVDKVKKSESGMIVDPITMRPNQRIREALEMMAKYRISGVPITKANGKLVGILTNRDLRFETNLDLLISDRMTKRNLV TVPVGTTLEQAKEHLKHTRVEKLLVVDGEKNLKGLITIKDIEKIKKYPNACKDSLGRLRVGAAVGPTPDVDARIDALLKA GVDVVVIDTAHGHSQGVIDTIARIKSDFPGLELVAGNIATADAAEALIKAGVDAIKVGIGPGSICTTRVVAGIGVPQITA IAECSRVAKKHGIPLIADGGIKYSGDLTKAVAAGADVVMIGSLFAGTEESPGDTILYQGRAYKSYRGMGSIGAMKEGSKD RYFQSDVDSDVKLVPEGIEGMVPLRGPLSANVHQLMGGLRAGMGYTGSRTIVELQQNGRFVRITGAGLKESHVHDVMITK EAPNYRVEK >Mature_489_residues MLESSLPEGLTFDDVLLLPAHSLILPRDTDLSSRLTNNIQLNIPLVSAAMDTVTESRAAICMAREGGIGFIHKNLTVAEQ AMEVDKVKKSESGMIVDPITMRPNQRIREALEMMAKYRISGVPITKANGKLVGILTNRDLRFETNLDLLISDRMTKRNLV TVPVGTTLEQAKEHLKHTRVEKLLVVDGEKNLKGLITIKDIEKIKKYPNACKDSLGRLRVGAAVGPTPDVDARIDALLKA GVDVVVIDTAHGHSQGVIDTIARIKSDFPGLELVAGNIATADAAEALIKAGVDAIKVGIGPGSICTTRVVAGIGVPQITA IAECSRVAKKHGIPLIADGGIKYSGDLTKAVAAGADVVMIGSLFAGTEESPGDTILYQGRAYKSYRGMGSIGAMKEGSKD RYFQSDVDSDVKLVPEGIEGMVPLRGPLSANVHQLMGGLRAGMGYTGSRTIVELQQNGRFVRITGAGLKESHVHDVMITK EAPNYRVEK
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=456, Percent_Identity=42.5438596491228, Blast_Score=348, Evalue=8e-96, Organism=Homo sapiens, GI217035146, Length=456, Percent_Identity=42.3245614035088, Blast_Score=337, Evalue=1e-92, Organism=Homo sapiens, GI156616279, Length=456, Percent_Identity=42.3245614035088, Blast_Score=337, Evalue=2e-92, Organism=Homo sapiens, GI34328928, Length=456, Percent_Identity=42.3245614035088, Blast_Score=337, Evalue=2e-92, Organism=Homo sapiens, GI34328930, Length=456, Percent_Identity=42.3245614035088, Blast_Score=336, Evalue=2e-92, Organism=Homo sapiens, GI217035152, Length=450, Percent_Identity=42.2222222222222, Blast_Score=328, Evalue=8e-90, Organism=Homo sapiens, GI217035148, Length=456, Percent_Identity=41.4473684210526, Blast_Score=325, Evalue=6e-89, Organism=Homo sapiens, GI217035150, Length=456, Percent_Identity=38.8157894736842, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI50541956, Length=375, Percent_Identity=31.7333333333333, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI50541954, Length=268, Percent_Identity=35.0746268656716, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI50541952, Length=268, Percent_Identity=35.0746268656716, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI50541948, Length=268, Percent_Identity=35.0746268656716, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI156104880, Length=227, Percent_Identity=37.0044052863436, Blast_Score=154, Evalue=2e-37, Organism=Escherichia coli, GI1788855, Length=481, Percent_Identity=58.2120582120582, Blast_Score=522, Evalue=1e-149, Organism=Escherichia coli, GI1786293, Length=228, Percent_Identity=37.280701754386, Blast_Score=159, Evalue=3e-40, Organism=Caenorhabditis elegans, GI71994385, Length=501, Percent_Identity=35.3293413173653, Blast_Score=265, Evalue=6e-71, Organism=Caenorhabditis elegans, GI71994389, Length=427, Percent_Identity=37.2365339578454, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17560440, Length=243, Percent_Identity=38.6831275720165, Blast_Score=174, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6322012, Length=492, Percent_Identity=41.0569105691057, Blast_Score=341, Evalue=2e-94, Organism=Saccharomyces cerevisiae, GI6323585, Length=491, Percent_Identity=40.7331975560082, Blast_Score=333, Evalue=3e-92, Organism=Saccharomyces cerevisiae, GI6323464, Length=492, Percent_Identity=41.260162601626, Blast_Score=327, Evalue=3e-90, Organism=Saccharomyces cerevisiae, GI6319352, Length=347, Percent_Identity=43.2276657060519, Blast_Score=261, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6319353, Length=117, Percent_Identity=38.4615384615385, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI24641071, Length=484, Percent_Identity=40.702479338843, Blast_Score=333, Evalue=2e-91, Organism=Drosophila melanogaster, GI24641073, Length=484, Percent_Identity=40.702479338843, Blast_Score=333, Evalue=2e-91, Organism=Drosophila melanogaster, GI28571163, Length=442, Percent_Identity=40.2714932126697, Blast_Score=296, Evalue=3e-80,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52309; Mature: 52309
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLESSLPEGLTFDDVLLLPAHSLILPRDTDLSSRLTNNIQLNIPLVSAAMDTVTESRAAI CCCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHCCCEEEEEEEHHHHHHHHHHCCEEE CMAREGGIGFIHKNLTVAEQAMEVDKVKKSESGMIVDPITMRPNQRIREALEMMAKYRIS EEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECEECCCCHHHHHHHHHHHHHHCC GVPITKANGKLVGILTNRDLRFETNLDLLISDRMTKRNLVTVPVGTTLEQAKEHLKHTRV CCEEEECCCEEEEEEECCCEEEECCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHH EKLLVVDGEKNLKGLITIKDIEKIKKYPNACKDSLGRLRVGAAVGPTPDVDARIDALLKA EEEEEECCCCCCEEEEEHHHHHHHHHCCCHHHHHHCCEEECCCCCCCCCCHHHHHHHHHC GVDVVVIDTAHGHSQGVIDTIARIKSDFPGLELVAGNIATADAAEALIKAGVDAIKVGIG CCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECC PGSICTTRVVAGIGVPQITAIAECSRVAKKHGIPLIADGGIKYSGDLTKAVAAGADVVMI CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCEEECCCHHHHHHCCCCEEEE GSLFAGTEESPGDTILYQGRAYKSYRGMGSIGAMKEGSKDRYFQSDVDSDVKLVPEGIEG EHHHCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC MVPLRGPLSANVHQLMGGLRAGMGYTGSRTIVELQQNGRFVRITGAGLKESHVHDVMITK CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEE EAPNYRVEK CCCCCCCCC >Mature Secondary Structure MLESSLPEGLTFDDVLLLPAHSLILPRDTDLSSRLTNNIQLNIPLVSAAMDTVTESRAAI CCCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHCCCEEEEEEEHHHHHHHHHHCCEEE CMAREGGIGFIHKNLTVAEQAMEVDKVKKSESGMIVDPITMRPNQRIREALEMMAKYRIS EEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECEECCCCHHHHHHHHHHHHHHCC GVPITKANGKLVGILTNRDLRFETNLDLLISDRMTKRNLVTVPVGTTLEQAKEHLKHTRV CCEEEECCCEEEEEEECCCEEEECCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHH EKLLVVDGEKNLKGLITIKDIEKIKKYPNACKDSLGRLRVGAAVGPTPDVDARIDALLKA EEEEEECCCCCCEEEEEHHHHHHHHHCCCHHHHHHCCEEECCCCCCCCCCHHHHHHHHHC GVDVVVIDTAHGHSQGVIDTIARIKSDFPGLELVAGNIATADAAEALIKAGVDAIKVGIG CCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECC PGSICTTRVVAGIGVPQITAIAECSRVAKKHGIPLIADGGIKYSGDLTKAVAAGADVVMI CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCEEECCCHHHHHHCCCCEEEE GSLFAGTEESPGDTILYQGRAYKSYRGMGSIGAMKEGSKDRYFQSDVDSDVKLVPEGIEG EHHHCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC MVPLRGPLSANVHQLMGGLRAGMGYTGSRTIVELQQNGRFVRITGAGLKESHVHDVMITK CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEE EAPNYRVEK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]