Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
---|---|
Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is cheY-5 [H]
Identifier: 197117145
GI number: 197117145
Start: 884345
End: 884722
Strand: Direct
Name: cheY-5 [H]
Synonym: Gbem_0750
Alternate gene names: 197117145
Gene position: 884345-884722 (Clockwise)
Preceding gene: 197117144
Following gene: 197117146
Centisome position: 19.16
GC content: 58.73
Gene sequence:
>378_bases ATGTCAGATTACAACGTTTTGATAGTTGAAGATTCGCCGACCATGAGGCAGCTCATCGCCTTCGCCTTGAAAAGGATCCG CGGCGTCCGCATAGTGGAGGCCAACGACGGCGTCGACGGGCTGAAAAAGCTCTCCTCGGAGCGGTTCGACCTGATACTCA CCGACATCAACATGCCGATCATGGACGGGTTGAAGCTGGTGAGCCTGGTGAGAAACGACGCCAACTACAAGGCGATTCCC ATCGTGGTGATCACCACGGAAGGGGCGCAGGAAGACCGGGAGCGCGCGCTGGCCCTGGGGGCGAACGACTACATCACCAA GCCGATCCAGCCCACGAAGATCCTGGACGTGGCGAAGAGCCTGCTCAAGATCGCCTAG
Upstream 100 bases:
>100_bases CAGGCTCTACAGCGATTCGGAGCGGAAGCTGTCGACCATACAGGGATTCATTGATCTCTTGACCAAATAATCAGCTATTG AAATGGGGGATACAGGTCAG
Downstream 100 bases:
>100_bases AGCCACTGGGCTCTTGCCGCGGCGGGAGAGGCGCTGGCTGAGCGCATCGCCCACCCGGCACCCTCCGAGGGGAACAAAAA AGCCACCCCTGCGGCCCCGC
Product: chemotaxis protein CheY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSDYNVLIVEDSPTMRQLIAFALKRIRGVRIVEANDGVDGLKKLSSERFDLILTDINMPIMDGLKLVSLVRNDANYKAIP IVVITTEGAQEDRERALALGANDYITKPIQPTKILDVAKSLLKIA
Sequences:
>Translated_125_residues MSDYNVLIVEDSPTMRQLIAFALKRIRGVRIVEANDGVDGLKKLSSERFDLILTDINMPIMDGLKLVSLVRNDANYKAIP IVVITTEGAQEDRERALALGANDYITKPIQPTKILDVAKSLLKIA >Mature_124_residues SDYNVLIVEDSPTMRQLIAFALKRIRGVRIVEANDGVDGLKKLSSERFDLILTDINMPIMDGLKLVSLVRNDANYKAIPI VVITTEGAQEDRERALALGANDYITKPIQPTKILDVAKSLLKIA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=33.8983050847458, Blast_Score=82, Evalue=1e-17, Organism=Escherichia coli, GI1788191, Length=103, Percent_Identity=37.8640776699029, Blast_Score=81, Evalue=2e-17, Organism=Escherichia coli, GI145693157, Length=122, Percent_Identity=35.2459016393443, Blast_Score=75, Evalue=1e-15, Organism=Escherichia coli, GI1788713, Length=118, Percent_Identity=36.4406779661017, Blast_Score=69, Evalue=9e-14, Organism=Escherichia coli, GI1786911, Length=105, Percent_Identity=34.2857142857143, Blast_Score=65, Evalue=1e-12, Organism=Escherichia coli, GI1789809, Length=123, Percent_Identity=31.7073170731707, Blast_Score=64, Evalue=2e-12, Organism=Escherichia coli, GI1787487, Length=105, Percent_Identity=38.0952380952381, Blast_Score=63, Evalue=5e-12, Organism=Escherichia coli, GI1789149, Length=113, Percent_Identity=30.9734513274336, Blast_Score=63, Evalue=5e-12, Organism=Escherichia coli, GI1788724, Length=117, Percent_Identity=35.8974358974359, Blast_Score=63, Evalue=6e-12, Organism=Escherichia coli, GI1790863, Length=122, Percent_Identity=32.7868852459016, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1786784, Length=118, Percent_Identity=33.0508474576271, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI87082012, Length=118, Percent_Identity=30.5084745762712, Blast_Score=61, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13851; Mature: 13720
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYNVLIVEDSPTMRQLIAFALKRIRGVRIVEANDGVDGLKKLSSERFDLILTDINMPI CCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCCEEEEEEECCCCH MDGLKLVSLVRNDANYKAIPIVVITTEGAQEDRERALALGANDYITKPIQPTKILDVAKS HHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH LLKIA HHHCC >Mature Secondary Structure SDYNVLIVEDSPTMRQLIAFALKRIRGVRIVEANDGVDGLKKLSSERFDLILTDINMPI CCCEEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCCEEEEEEECCCCH MDGLKLVSLVRNDANYKAIPIVVITTEGAQEDRERALALGANDYITKPIQPTKILDVAKS HHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH LLKIA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]