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The map label for this gene is 197117144

Identifier: 197117144

GI number: 197117144

Start: 883493

End: 884314

Strand: Direct

Name: 197117144

Synonym: Gbem_0749

Alternate gene names: NA

Gene position: 883493-884314 (Clockwise)

Preceding gene: 197117143

Following gene: 197117145

Centisome position: 19.14

GC content: 59.49

Gene sequence:

>822_bases
ATGCAAAAGGACGATGAACGTATGGTTCATAGCAGGGGCGAGGAGTTTCTGCAGGTTTTCAAAAAAGGTGCCGAGTTCAC
CCAGGACCTGCTCAAGGAGAACGAGCGGCTGCGGTTCAGGGTGCTCGAGCTCGAGAAGTTCCAGACTTCAGGCGGCGAGG
CCGGGGGCGGAGCCGACCTGAGGAAGCTCACCGAGCGGATCGCCGATCTCGAAGCCGAGAAGCAGGAGATCCTGGACCGG
ATCAAGCACGTCGAGGAGGAGAACCAGGACTTCGCGGCGCGCTACCTGGAGATCGAGGACGAGAACAACAACCTCGCCAA
CCTCTACATTGCGAGCTACCAGCTGCACTCGACGCTCGACTTCAAAGAGGTGCTCCAGATCATCACGGAGATCATCATCA
ACCTGATCGGGGCCGAAGAGTTCGCCATCATGCTCCTGGACGAGAAGAGCGACGAGATCCAGGCTGTGGCCACCGAAGGG
GTGGAGCGGAGCGAGATCCCGTCGGTGCGGTTGGACATGGGTGTCATCGGCGAGGTGGCAACCTCAGGCGAGAGCCATTT
CGCCACCGACTTCGACGCCTACGAGCGCGACTTCACCACGCCCATGGTCTGCATCCCGCTCAAGATCAAGGAGCACGTGA
TCGGCGTCCTCGCCATCTACAAGCTCCTGATGCAGAAAAAGGAGTTCGCGCCGGTCGACTACGAGCTGTTCACGCTCCTG
GCCGGGCACGCGGCGACCGCCATCTTCAGCTCCAGGCTCTACAGCGATTCGGAGCGGAAGCTGTCGACCATACAGGGATT
CATTGATCTCTTGACCAAATAA

Upstream 100 bases:

>100_bases
GACAAAGTGGTGCCCATGGACGATATGGCACGCGAGATCATGCATCGCTGCGGCTTTATGCCGCGGTTTGGCTGACAACA
AGACGAAAACCGGAGTGCGT

Downstream 100 bases:

>100_bases
TCAGCTATTGAAATGGGGGATACAGGTCAGATGTCAGATTACAACGTTTTGATAGTTGAAGATTCGCCGACCATGAGGCA
GCTCATCGCCTTCGCCTTGA

Product: GAF domain-containing protein

Products: NA

Alternate protein names: GAF Sensor Protein; GAF Domain Protein

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MQKDDERMVHSRGEEFLQVFKKGAEFTQDLLKENERLRFRVLELEKFQTSGGEAGGGADLRKLTERIADLEAEKQEILDR
IKHVEEENQDFAARYLEIEDENNNLANLYIASYQLHSTLDFKEVLQIITEIIINLIGAEEFAIMLLDEKSDEIQAVATEG
VERSEIPSVRLDMGVIGEVATSGESHFATDFDAYERDFTTPMVCIPLKIKEHVIGVLAIYKLLMQKKEFAPVDYELFTLL
AGHAATAIFSSRLYSDSERKLSTIQGFIDLLTK

Sequences:

>Translated_273_residues
MQKDDERMVHSRGEEFLQVFKKGAEFTQDLLKENERLRFRVLELEKFQTSGGEAGGGADLRKLTERIADLEAEKQEILDR
IKHVEEENQDFAARYLEIEDENNNLANLYIASYQLHSTLDFKEVLQIITEIIINLIGAEEFAIMLLDEKSDEIQAVATEG
VERSEIPSVRLDMGVIGEVATSGESHFATDFDAYERDFTTPMVCIPLKIKEHVIGVLAIYKLLMQKKEFAPVDYELFTLL
AGHAATAIFSSRLYSDSERKLSTIQGFIDLLTK
>Mature_273_residues
MQKDDERMVHSRGEEFLQVFKKGAEFTQDLLKENERLRFRVLELEKFQTSGGEAGGGADLRKLTERIADLEAEKQEILDR
IKHVEEENQDFAARYLEIEDENNNLANLYIASYQLHSTLDFKEVLQIITEIIINLIGAEEFAIMLLDEKSDEIQAVATEG
VERSEIPSVRLDMGVIGEVATSGESHFATDFDAYERDFTTPMVCIPLKIKEHVIGVLAIYKLLMQKKEFAPVDYELFTLL
AGHAATAIFSSRLYSDSERKLSTIQGFIDLLTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31074; Mature: 31074

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKDDERMVHSRGEEFLQVFKKGAEFTQDLLKENERLRFRVLELEKFQTSGGEAGGGADL
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCCCCHHH
RKLTERIADLEAEKQEILDRIKHVEEENQDFAARYLEIEDENNNLANLYIASYQLHSTLD
HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHEEEEECCCCCEEEEEEEEEHHHCCCC
FKEVLQIITEIIINLIGAEEFAIMLLDEKSDEIQAVATEGVERSEIPSVRLDMGVIGEVA
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCHHCCCCEEECHHHHHHHH
TSGESHFATDFDAYERDFTTPMVCIPLKIKEHVIGVLAIYKLLMQKKEFAPVDYELFTLL
CCCCCCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AGHAATAIFSSRLYSDSERKLSTIQGFIDLLTK
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKDDERMVHSRGEEFLQVFKKGAEFTQDLLKENERLRFRVLELEKFQTSGGEAGGGADL
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCCCCHHH
RKLTERIADLEAEKQEILDRIKHVEEENQDFAARYLEIEDENNNLANLYIASYQLHSTLD
HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHEEEEECCCCCEEEEEEEEEHHHCCCC
FKEVLQIITEIIINLIGAEEFAIMLLDEKSDEIQAVATEGVERSEIPSVRLDMGVIGEVA
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCHHCCCCEEECHHHHHHHH
TSGESHFATDFDAYERDFTTPMVCIPLKIKEHVIGVLAIYKLLMQKKEFAPVDYELFTLL
CCCCCCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AGHAATAIFSSRLYSDSERKLSTIQGFIDLLTK
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA