Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117090

Identifier: 197117090

GI number: 197117090

Start: 822181

End: 824727

Strand: Direct

Name: 197117090

Synonym: Gbem_0694

Alternate gene names: NA

Gene position: 822181-824727 (Clockwise)

Preceding gene: 197117080

Following gene: 197117091

Centisome position: 17.81

GC content: 59.21

Gene sequence:

>2547_bases
ATGATACTTTCCGACACGTTCAACGCTTTATACCCTACCGCTCGGAAAGGTTCACACGTGCATTTTTACAATATTTTCCG
TGCTTCATTGTCAAAGATCCTCATTGTCCTGCTTTTGGTTGCGCTCACAGTACCGGCGCCCTCCTTTGCTCTTGATTCAG
AAGATTCCCAGATCTTTATCTCAGGATTTAATGCCTATCAGAAAAAGGAATATAAGACTGCCATTGACAGTATGTCAGTG
CTTCTCAAGAAGTATCCTGACACACCGCTCAAGGACATGGCGATATTTTGGCTGGCGAGGGCGCACTATAAGGCTGGGCA
TCAGCAGGACGCAGCAAAATACATGGCGCAGTTCCTGCGGGAATACCCGGAGAGCCCGCTCAAAGCGACGGTCGAGGATG
GGCTGCTGGCGCTGGCGGACAAATATGAGAAGGGCGAGCCTCTTGAGCTGACTGCGAAGCCGGTTCAGAAACCGGTTGCG
GCGCCGGACGCCGCTGCCGTTGCAAAGGCAGCCGCTGCAGAGAAGGCTGCTGCTGAGAAGGCTGCTGCAGAGAAGATCGC
TGCAGAGAAGATCGCTGCAGAGAAGATCGCTGCAGAGAAGGTCGCTGCGGCAAAGGCTGCTGTCGCAAAGATTGCCGCCG
AGAGAGCTGCCGCTCAGAAGGTCGCTGTGGAGAAGGCCGCTGCCGAGAAAGCTGCTGCTGTGAAAGCCGCTGCCGAGAAA
GCCGCTGTAGAGAAAGCCGCTGCCGAGAAAGCCGCTGCCGAGAAAGCCGCTGCCGAGAAAGCCGCTGCCGAGAAAGCCGC
TGCCGAGAAAGCCGCTGCCGAGAAAGTCGCTGCAAATAGAGCCGCTGCCGAGAAGGCCGCCAGCCAGAAGGTAGTGCGGC
AGAAGACAAAGCAGGCTAAGAAAAAAGAAACCCGCGAGCAGAAGACGGCGAACGCTATGCGCGCCAAGGCCATTGCAGCA
TACAAGGACGTTATCGACCGCTACCCCGGAACTACTGCCGCCGCGAATGCCTCCGCTAAGCTGCAGCAGATGGGCATCGA
CTACCCCGCTGCCCAGAAAACCGCTGCAAGTGCCGCTCCCCAGGCCGAAGTCTCGCAGGTTTTCAACCTGGAGGTGGCTC
AATACGCCGACCTCGACGTTACCTTCGGCCAGGCGGCTGAGACCCAGGAAGCAGGCAAAAAGTTCATCATTCCGCTGGAC
ATCGTCAACAACGGCAACGGCAGTGACAGCTTCTACCTGGAGTCGGGTTTCCCCTCGGAATACGCTTTCCATTTCGCCGC
TGCGACTTCCCCCGACACCCCTATCAACACCACTCCCCCCCTTGAGGTAGGGGAGAAGTTCCGCGCCGTTGCTGTAGGCA
TCATGCCGCGCGGTACCATAGACGGCCAAAAGAGCAGCTTCCCGGTGAAGATCGGCTCCGCGTTCGCCCGCGAGGTGTCC
CAGTCCAGGGAAATCACGCTGGTTGCTTCCGCACCGCTGCTGCGTGCCGTGGTGAAGAGCGACAAGACGAAATTGCTCCC
GGGCGAGAAGATCTCCTATCGGATCTCCTTGCTGAACATCGGCACCGCCGCTGCGCGCGGGGTCACCATGAGGCTCAACT
ATCCGCCGCAGTACGAGCCGGTCAGCTTCCTCCCCACCGGGTTCCGACAGGAGGCGAAGGCCGCCTTGGTGCTCGATGGG
ATGCAGCTCAAGTCGGGCGAGAGCCAGGACTTCAACGTCACCTTCCAGTTGAAGGACGAGGCGCTCGCCGACCAGGAACT
CTTCGTCCGGGCCGACGTTGTAAACAACGACCTCGACAAGAAGGAATCGTTTGTATCGGCAACCAGCGTGGTGCAGAAGG
TCAGCTCTGTCGCCGCGAGGAGCACCGCCGGCAAGCTGGTGGTCATCCCCGGCCAGACCGTGGCGATTCCGTTGATCGTG
ACTAACACCGGAAACGCCCGCGACCTGTACCTGATCAAGTCGACGATGCCGGCGAACGCCAGCTACACCTTCTTTGACGA
CGTCAACCGCGACGGGAAGCGGCAGGCCGATGAACCGATCATCAACCACGTCGGGCCGCTTTCTCCCAAGGAAGAGGCCT
ACATCGTGCTGGAAATCTCCACCCCGACTACCGCAGCTGACGGTGCCGTTGCCGCTGCGTCTGTCCAGTTCCAGCCGGAG
AACGCCACCGACAGGTTCGCCTCCGTCAATCTGCAGCTGACTTATTCCCGCCCCATCCTCGAACTCACCATGGCTGCAAA
GGGTGGAAGGCTCAAGCCTGGCGAGGTCTCCTCGCTGGAACTGAACTGCATCAATCGCGGTACCAACCTGGCCAAGCAGG
TGACCCTACAAAGCTTCCTTCCGGCCCAGTTGGAGCTGGTGGCGGCCGATCCAGGCTTTGCCCGGGCCGACAACGGCGTC
TATACCTGGCGCTTCGACGAGCTGGGCGCCGGCGAGAAGCGCAACATCAAGGTTACCTATCGCGTCAAACCGGGCATAGC
CGTCGGAACCAACATGCAGCTCAAGAACCTGCTGAACTACCAGGATCCCATCGGAAACAGGTACTAA

Upstream 100 bases:

>100_bases
CCGGGGCTAGGGCAAGCGCAAACGCTCGAAAAAACACCGTGGAATGGGGCTCGGCACAGGTGTCAAGACCGCCATTCTGC
GTTGACAATATTTGTCTATA

Downstream 100 bases:

>100_bases
GATGGCACGTCGCAACCTACTGATCGTCACCTCCCTGCTGGTGCTGTCCGTCGCAGGGTCTCTTCCTTGCCGCGGCGAGG
AGATGCTTCTCTATGCCCCC

Product: pentapeptide repeat protein

Products: NA

Alternate protein names: Conserved Repeat Domain Protein; Pentapeptide Repeat Protein

Number of amino acids: Translated: 848; Mature: 848

Protein sequence:

>848_residues
MILSDTFNALYPTARKGSHVHFYNIFRASLSKILIVLLLVALTVPAPSFALDSEDSQIFISGFNAYQKKEYKTAIDSMSV
LLKKYPDTPLKDMAIFWLARAHYKAGHQQDAAKYMAQFLREYPESPLKATVEDGLLALADKYEKGEPLELTAKPVQKPVA
APDAAAVAKAAAAEKAAAEKAAAEKIAAEKIAAEKIAAEKVAAAKAAVAKIAAERAAAQKVAVEKAAAEKAAAVKAAAEK
AAVEKAAAEKAAAEKAAAEKAAAEKAAAEKAAAEKVAANRAAAEKAASQKVVRQKTKQAKKKETREQKTANAMRAKAIAA
YKDVIDRYPGTTAAANASAKLQQMGIDYPAAQKTAASAAPQAEVSQVFNLEVAQYADLDVTFGQAAETQEAGKKFIIPLD
IVNNGNGSDSFYLESGFPSEYAFHFAAATSPDTPINTTPPLEVGEKFRAVAVGIMPRGTIDGQKSSFPVKIGSAFAREVS
QSREITLVASAPLLRAVVKSDKTKLLPGEKISYRISLLNIGTAAARGVTMRLNYPPQYEPVSFLPTGFRQEAKAALVLDG
MQLKSGESQDFNVTFQLKDEALADQELFVRADVVNNDLDKKESFVSATSVVQKVSSVAARSTAGKLVVIPGQTVAIPLIV
TNTGNARDLYLIKSTMPANASYTFFDDVNRDGKRQADEPIINHVGPLSPKEEAYIVLEISTPTTAADGAVAAASVQFQPE
NATDRFASVNLQLTYSRPILELTMAAKGGRLKPGEVSSLELNCINRGTNLAKQVTLQSFLPAQLELVAADPGFARADNGV
YTWRFDELGAGEKRNIKVTYRVKPGIAVGTNMQLKNLLNYQDPIGNRY

Sequences:

>Translated_848_residues
MILSDTFNALYPTARKGSHVHFYNIFRASLSKILIVLLLVALTVPAPSFALDSEDSQIFISGFNAYQKKEYKTAIDSMSV
LLKKYPDTPLKDMAIFWLARAHYKAGHQQDAAKYMAQFLREYPESPLKATVEDGLLALADKYEKGEPLELTAKPVQKPVA
APDAAAVAKAAAAEKAAAEKAAAEKIAAEKIAAEKIAAEKVAAAKAAVAKIAAERAAAQKVAVEKAAAEKAAAVKAAAEK
AAVEKAAAEKAAAEKAAAEKAAAEKAAAEKAAAEKVAANRAAAEKAASQKVVRQKTKQAKKKETREQKTANAMRAKAIAA
YKDVIDRYPGTTAAANASAKLQQMGIDYPAAQKTAASAAPQAEVSQVFNLEVAQYADLDVTFGQAAETQEAGKKFIIPLD
IVNNGNGSDSFYLESGFPSEYAFHFAAATSPDTPINTTPPLEVGEKFRAVAVGIMPRGTIDGQKSSFPVKIGSAFAREVS
QSREITLVASAPLLRAVVKSDKTKLLPGEKISYRISLLNIGTAAARGVTMRLNYPPQYEPVSFLPTGFRQEAKAALVLDG
MQLKSGESQDFNVTFQLKDEALADQELFVRADVVNNDLDKKESFVSATSVVQKVSSVAARSTAGKLVVIPGQTVAIPLIV
TNTGNARDLYLIKSTMPANASYTFFDDVNRDGKRQADEPIINHVGPLSPKEEAYIVLEISTPTTAADGAVAAASVQFQPE
NATDRFASVNLQLTYSRPILELTMAAKGGRLKPGEVSSLELNCINRGTNLAKQVTLQSFLPAQLELVAADPGFARADNGV
YTWRFDELGAGEKRNIKVTYRVKPGIAVGTNMQLKNLLNYQDPIGNRY
>Mature_848_residues
MILSDTFNALYPTARKGSHVHFYNIFRASLSKILIVLLLVALTVPAPSFALDSEDSQIFISGFNAYQKKEYKTAIDSMSV
LLKKYPDTPLKDMAIFWLARAHYKAGHQQDAAKYMAQFLREYPESPLKATVEDGLLALADKYEKGEPLELTAKPVQKPVA
APDAAAVAKAAAAEKAAAEKAAAEKIAAEKIAAEKIAAEKVAAAKAAVAKIAAERAAAQKVAVEKAAAEKAAAVKAAAEK
AAVEKAAAEKAAAEKAAAEKAAAEKAAAEKAAAEKVAANRAAAEKAASQKVVRQKTKQAKKKETREQKTANAMRAKAIAA
YKDVIDRYPGTTAAANASAKLQQMGIDYPAAQKTAASAAPQAEVSQVFNLEVAQYADLDVTFGQAAETQEAGKKFIIPLD
IVNNGNGSDSFYLESGFPSEYAFHFAAATSPDTPINTTPPLEVGEKFRAVAVGIMPRGTIDGQKSSFPVKIGSAFAREVS
QSREITLVASAPLLRAVVKSDKTKLLPGEKISYRISLLNIGTAAARGVTMRLNYPPQYEPVSFLPTGFRQEAKAALVLDG
MQLKSGESQDFNVTFQLKDEALADQELFVRADVVNNDLDKKESFVSATSVVQKVSSVAARSTAGKLVVIPGQTVAIPLIV
TNTGNARDLYLIKSTMPANASYTFFDDVNRDGKRQADEPIINHVGPLSPKEEAYIVLEISTPTTAADGAVAAASVQFQPE
NATDRFASVNLQLTYSRPILELTMAAKGGRLKPGEVSSLELNCINRGTNLAKQVTLQSFLPAQLELVAADPGFARADNGV
YTWRFDELGAGEKRNIKVTYRVKPGIAVGTNMQLKNLLNYQDPIGNRY

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90595; Mature: 90595

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSDTFNALYPTARKGSHVHFYNIFRASLSKILIVLLLVALTVPAPSFALDSEDSQIFI
CCCCCCCHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEE
SGFNAYQKKEYKTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKAGHQQDAAKYMAQFLR
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EYPESPLKATVEDGLLALADKYEKGEPLELTAKPVQKPVAAPDAAAVAKAAAAEKAAAEK
HCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AAAEKIAAEKIAAEKIAAEKVAAAKAAVAKIAAERAAAQKVAVEKAAAEKAAAVKAAAEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVEKAAAEKAAAEKAAAEKAAAEKAAAEKAAAEKVAANRAAAEKAASQKVVRQKTKQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKETREQKTANAMRAKAIAAYKDVIDRYPGTTAAANASAKLQQMGIDYPAAQKTAASAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCC
QAEVSQVFNLEVAQYADLDVTFGQAAETQEAGKKFIIPLDIVNNGNGSDSFYLESGFPSE
HHHHHHHHCCHHHHHCCCEEECCCCCCHHHCCCEEEEEEEEEECCCCCCCEEEECCCCCH
YAFHFAAATSPDTPINTTPPLEVGEKFRAVAVGIMPRGTIDGQKSSFPVKIGSAFAREVS
HEEEEEECCCCCCCCCCCCCHHHCCHHEEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHH
QSREITLVASAPLLRAVVKSDKTKLLPGEKISYRISLLNIGTAAARGVTMRLNYPPQYEP
CCCCEEEEECCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHCCEEEEECCCCCCCC
VSFLPTGFRQEAKAALVLDGMQLKSGESQDFNVTFQLKDEALADQELFVRADVVNNDLDK
CCCCCCCCHHHCCEEEEEECEEECCCCCCCEEEEEEECCCHHCCCHHEEEEHHHCCCHHH
KESFVSATSVVQKVSSVAARSTAGKLVVIPGQTVAIPLIVTNTGNARDLYLIKSTMPANA
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEEECCCCCCEEEEEEECCCCCC
SYTFFDDVNRDGKRQADEPIINHVGPLSPKEEAYIVLEISTPTTAADGAVAAASVQFQPE
CEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCC
NATDRFASVNLQLTYSRPILELTMAAKGGRLKPGEVSSLELNCINRGTNLAKQVTLQSFL
CCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCC
PAQLELVAADPGFARADNGVYTWRFDELGAGEKRNIKVTYRVKPGIAVGTNMQLKNLLNY
CCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCEEECCCHHHHHHHCC
QDPIGNRY
CCCCCCCC
>Mature Secondary Structure
MILSDTFNALYPTARKGSHVHFYNIFRASLSKILIVLLLVALTVPAPSFALDSEDSQIFI
CCCCCCCHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEE
SGFNAYQKKEYKTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKAGHQQDAAKYMAQFLR
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EYPESPLKATVEDGLLALADKYEKGEPLELTAKPVQKPVAAPDAAAVAKAAAAEKAAAEK
HCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AAAEKIAAEKIAAEKIAAEKVAAAKAAVAKIAAERAAAQKVAVEKAAAEKAAAVKAAAEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVEKAAAEKAAAEKAAAEKAAAEKAAAEKAAAEKVAANRAAAEKAASQKVVRQKTKQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKETREQKTANAMRAKAIAAYKDVIDRYPGTTAAANASAKLQQMGIDYPAAQKTAASAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCC
QAEVSQVFNLEVAQYADLDVTFGQAAETQEAGKKFIIPLDIVNNGNGSDSFYLESGFPSE
HHHHHHHHCCHHHHHCCCEEECCCCCCHHHCCCEEEEEEEEEECCCCCCCEEEECCCCCH
YAFHFAAATSPDTPINTTPPLEVGEKFRAVAVGIMPRGTIDGQKSSFPVKIGSAFAREVS
HEEEEEECCCCCCCCCCCCCHHHCCHHEEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHH
QSREITLVASAPLLRAVVKSDKTKLLPGEKISYRISLLNIGTAAARGVTMRLNYPPQYEP
CCCCEEEEECCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHCCEEEEECCCCCCCC
VSFLPTGFRQEAKAALVLDGMQLKSGESQDFNVTFQLKDEALADQELFVRADVVNNDLDK
CCCCCCCCHHHCCEEEEEECEEECCCCCCCEEEEEEECCCHHCCCHHEEEEHHHCCCHHH
KESFVSATSVVQKVSSVAARSTAGKLVVIPGQTVAIPLIVTNTGNARDLYLIKSTMPANA
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEEECCCCCCEEEEEEECCCCCC
SYTFFDDVNRDGKRQADEPIINHVGPLSPKEEAYIVLEISTPTTAADGAVAAASVQFQPE
CEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCC
NATDRFASVNLQLTYSRPILELTMAAKGGRLKPGEVSSLELNCINRGTNLAKQVTLQSFL
CCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCC
PAQLELVAADPGFARADNGVYTWRFDELGAGEKRNIKVTYRVKPGIAVGTNMQLKNLLNY
CCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCEEECCCHHHHHHHCC
QDPIGNRY
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA