Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is 197117025
Identifier: 197117025
GI number: 197117025
Start: 749450
End: 750019
Strand: Reverse
Name: 197117025
Synonym: Gbem_0628
Alternate gene names: NA
Gene position: 750019-749450 (Counterclockwise)
Preceding gene: 197117026
Following gene: 197117024
Centisome position: 16.25
GC content: 71.4
Gene sequence:
>570_bases GTGAGGCTTCCCGCCGCCCTGCTCATAGTGGCGCTGGCCGCCGGCGCGGCCTACTCGGCGCCTGCGGCGCCGCGCCCCTA CAGCGGCTGCGGCATCCTGACGCTGAGACAGTGGGGGGCGCTGCAGTCGGCGCCCCTTCCGCTTTACCGCGAACCGGGTG TGCAGCGCATCGCCGAGAAAAGCGCCGCTGCGCTGCCCCGCCTGGCGGGCGACGGCGTCGAGCCGCTGGTGGCGGCGAGC GAGCGGCGCGGCAACTGGACCCGGCTCTCGCTTGACGAAGCGGGGCGGCAGGGTTGGCTGGAGCAGCAGCGCGGCTGGGA ATACGCGAGCTGGGAGGAGTTCCTCCCCGGCCGCACCGTCCGCGTGCTCCCCGGACTGAAGAAGGGGTGGTACCAGCTCA AGGGGGCACCCACGGAAGAGGCGGCGGGACTCGCCTCGCTTTCCCGGGACCAGTTGGTACAAGTGCTGGAGGTCGAGGAG GACTGGGTGAAGCTGGAGCGTCCCTCAGGCTGGTTCAGATGGCGCGACCCCGACGGCCGTCTCACCGTCTCCCTTAAGAC CTCGAGGTAG
Upstream 100 bases:
>100_bases CCGGCGGCGCCCGCTTCACCGAGCCGCTCATGGTTACCCCCTACGGGAAGATGGCCGTCGTGGCCGACCCCGACGGAAAC GAGTTCGCGCTGGTGGAGAT
Downstream 100 bases:
>100_bases ACAAAGCATCTGCCTTTGTTCATCTCGGACACTTTCCAATTCCTGCGCCGAGCGCCGTGTTTTTCTTCCAAGTGATCATT TTCTTCTCCCAAGTGACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRLPAALLIVALAAGAAYSAPAAPRPYSGCGILTLRQWGALQSAPLPLYREPGVQRIAEKSAAALPRLAGDGVEPLVAAS ERRGNWTRLSLDEAGRQGWLEQQRGWEYASWEEFLPGRTVRVLPGLKKGWYQLKGAPTEEAAGLASLSRDQLVQVLEVEE DWVKLERPSGWFRWRDPDGRLTVSLKTSR
Sequences:
>Translated_189_residues MRLPAALLIVALAAGAAYSAPAAPRPYSGCGILTLRQWGALQSAPLPLYREPGVQRIAEKSAAALPRLAGDGVEPLVAAS ERRGNWTRLSLDEAGRQGWLEQQRGWEYASWEEFLPGRTVRVLPGLKKGWYQLKGAPTEEAAGLASLSRDQLVQVLEVEE DWVKLERPSGWFRWRDPDGRLTVSLKTSR >Mature_189_residues MRLPAALLIVALAAGAAYSAPAAPRPYSGCGILTLRQWGALQSAPLPLYREPGVQRIAEKSAAALPRLAGDGVEPLVAAS ERRGNWTRLSLDEAGRQGWLEQQRGWEYASWEEFLPGRTVRVLPGLKKGWYQLKGAPTEEAAGLASLSRDQLVQVLEVEE DWVKLERPSGWFRWRDPDGRLTVSLKTSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20857; Mature: 20857
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPAALLIVALAAGAAYSAPAAPRPYSGCGILTLRQWGALQSAPLPLYREPGVQRIAEK CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHH SAAALPRLAGDGVEPLVAASERRGNWTRLSLDEAGRQGWLEQQRGWEYASWEEFLPGRTV HHHHCCHHCCCCCCHHHHHHCCCCCEEEEEHHHHHHHCHHHHHCCCCCCCHHHHCCCCEE RVLPGLKKGWYQLKGAPTEEAAGLASLSRDQLVQVLEVEEDWVKLERPSGWFRWRDPDGR EECCCCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHCHHHHEEECCCCCEEEECCCCE LTVSLKTSR EEEEEECCC >Mature Secondary Structure MRLPAALLIVALAAGAAYSAPAAPRPYSGCGILTLRQWGALQSAPLPLYREPGVQRIAEK CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHH SAAALPRLAGDGVEPLVAASERRGNWTRLSLDEAGRQGWLEQQRGWEYASWEEFLPGRTV HHHHCCHHCCCCCCHHHHHHCCCCCEEEEEHHHHHHHCHHHHHCCCCCCCHHHHCCCCEE RVLPGLKKGWYQLKGAPTEEAAGLASLSRDQLVQVLEVEEDWVKLERPSGWFRWRDPDGR EECCCCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHCHHHHEEECCCCCEEEECCCCE LTVSLKTSR EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA