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The map label for this gene is yccM [H]

Identifier: 197117013

GI number: 197117013

Start: 737313

End: 738308

Strand: Direct

Name: yccM [H]

Synonym: Gbem_0616

Alternate gene names: 197117013

Gene position: 737313-738308 (Clockwise)

Preceding gene: 197117012

Following gene: 308535178

Centisome position: 15.98

GC content: 61.55

Gene sequence:

>996_bases
ATGGCTGAAAAAAAAGTACAACAGGTAAGAATCGCGGTTCAGTGGGGCTTTCTTCTTTTTTCCCTCTACCTTGGGGTGAC
CTTCTACCGCTTCGTGCAGCACTTCCGCTCCGGCGGCGCGACCCCCTTCGTGGAGCGCCCGGACGGGGTCGAGGCCTTCC
TCCCCATCTCCGGCCTGGTCAGCCTCAAGGGGTGGCTCACCTCGGGTTCCATCAACCCGGTCCATCCCGCGGCGCTGGTG
GTCCTTTTAGCCGTCATCGCGGTGTCCGTCCTTCTGAAGCGCTCCTTCTGTTCCTGGATCTGCCCGGTTTCTACTATCAC
CGAGCTCTGCTGGAAGGTTGGGCACAAGATCTTCGGGCGCAACTACCGCGTCTGGCTCTGGCTGGACTGGCTCCTGCGCC
CCATCAAGTACCTGCTGGTCCTCTTCTTCCTCTTCTCGATCCTGGTGTTGATGGCGCCGGACAGCGTCGCCTCCTTCATC
CTTTCCGACTACAACAAGACGGCCGACGTGAAGATGCTCGACTTCTTCCTGAACCTGTCGGGGCTGCCGCTGGCTTTCAT
CTCCGGGTTCCTGCTTTTGTCCTTCTTTTTCCGCAACCCGTTCTGCCGCTTTTTCTGCCCGTACGGCGCGCTCTTGGCGG
TGCTCTCCCGCCTCGCCCCGGCCAAGGTGGAAAGGATGCAGAGCGCCTGCATCTCGTGCGGCAACTGCAACAAGGCCTGC
CCGTCCCATCTCGACGTGATGAACGCTAAGCGGGTCTGCTCCGAGGAGTGCATCGGCTGCCTGCGTTGCGTGAGTTCCTG
CCCGAAACCCGAGGCGCTGCAGGTGCGTCTCAAGGGAGGGAAGGTGGTTCCCGGCATGGTGTTCGCGGCCCTCGTGGTAG
TGATCTTCGTGGGGGGGACCCTGGTAGGGAGGGTGGCCGGGCACTGGCACAGCGAGATACCCAAGTCCGACTACCAGAGA
CTGATCAACAACGGCCCGCCGATAGAGCATCCGTGA

Upstream 100 bases:

>100_bases
AGTCGCAAATGTTTTCCCTCCCCAAGAGAGTCGGGTGAGGGCGGCGCCATGTTAGTTAATGCCAGGCAGCTGGCTCTATA
TCGGTAGTGAAGGTGAGGAA

Downstream 100 bases:

>100_bases
GTCCCCCCCCTTGACGGGAGGGGGGATTACACTGCATAAAACAAAAGAGGGGACGGTATCGCTACCGTCCCCTCTTCTTT
ATTCAATCTTTAAAGCCTTT

Product: iron-sulfur cluster-binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MAEKKVQQVRIAVQWGFLLFSLYLGVTFYRFVQHFRSGGATPFVERPDGVEAFLPISGLVSLKGWLTSGSINPVHPAALV
VLLAVIAVSVLLKRSFCSWICPVSTITELCWKVGHKIFGRNYRVWLWLDWLLRPIKYLLVLFFLFSILVLMAPDSVASFI
LSDYNKTADVKMLDFFLNLSGLPLAFISGFLLLSFFFRNPFCRFFCPYGALLAVLSRLAPAKVERMQSACISCGNCNKAC
PSHLDVMNAKRVCSEECIGCLRCVSSCPKPEALQVRLKGGKVVPGMVFAALVVVIFVGGTLVGRVAGHWHSEIPKSDYQR
LINNGPPIEHP

Sequences:

>Translated_331_residues
MAEKKVQQVRIAVQWGFLLFSLYLGVTFYRFVQHFRSGGATPFVERPDGVEAFLPISGLVSLKGWLTSGSINPVHPAALV
VLLAVIAVSVLLKRSFCSWICPVSTITELCWKVGHKIFGRNYRVWLWLDWLLRPIKYLLVLFFLFSILVLMAPDSVASFI
LSDYNKTADVKMLDFFLNLSGLPLAFISGFLLLSFFFRNPFCRFFCPYGALLAVLSRLAPAKVERMQSACISCGNCNKAC
PSHLDVMNAKRVCSEECIGCLRCVSSCPKPEALQVRLKGGKVVPGMVFAALVVVIFVGGTLVGRVAGHWHSEIPKSDYQR
LINNGPPIEHP
>Mature_330_residues
AEKKVQQVRIAVQWGFLLFSLYLGVTFYRFVQHFRSGGATPFVERPDGVEAFLPISGLVSLKGWLTSGSINPVHPAALVV
LLAVIAVSVLLKRSFCSWICPVSTITELCWKVGHKIFGRNYRVWLWLDWLLRPIKYLLVLFFLFSILVLMAPDSVASFIL
SDYNKTADVKMLDFFLNLSGLPLAFISGFLLLSFFFRNPFCRFFCPYGALLAVLSRLAPAKVERMQSACISCGNCNKACP
SHLDVMNAKRVCSEECIGCLRCVSSCPKPEALQVRLKGGKVVPGMVFAALVVVIFVGGTLVGRVAGHWHSEIPKSDYQRL
INNGPPIEHP

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=327, Percent_Identity=40.9785932721713, Blast_Score=255, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36809; Mature: 36678

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKKVQQVRIAVQWGFLLFSLYLGVTFYRFVQHFRSGGATPFVERPDGVEAFLPISGLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHH
SLKGWLTSGSINPVHPAALVVLLAVIAVSVLLKRSFCSWICPVSTITELCWKVGHKIFGR
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
NYRVWLWLDWLLRPIKYLLVLFFLFSILVLMAPDSVASFILSDYNKTADVKMLDFFLNLS
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCC
GLPLAFISGFLLLSFFFRNPFCRFFCPYGALLAVLSRLAPAKVERMQSACISCGNCNKAC
CCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCC
PSHLDVMNAKRVCSEECIGCLRCVSSCPKPEALQVRLKGGKVVPGMVFAALVVVIFVGGT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
LVGRVAGHWHSEIPKSDYQRLINNGPPIEHP
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AEKKVQQVRIAVQWGFLLFSLYLGVTFYRFVQHFRSGGATPFVERPDGVEAFLPISGLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHH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HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]