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The map label for this gene is (hspc4-1 [H]

Identifier: 197117000

GI number: 197117000

Start: 724615

End: 725058

Strand: Direct

Name: (hspc4-1 [H]

Synonym: Gbem_0603

Alternate gene names: 197117000

Gene position: 724615-725058 (Clockwise)

Preceding gene: 197116998

Following gene: 197117001

Centisome position: 15.7

GC content: 62.61

Gene sequence:

>444_bases
ATGGCGGTGATTCCCAAAGAACCGTTGGAGTGGCTGGGGCTGTTCCGCCAGCAGATGGACGAGATCTTCCGTTATCTCTC
CACGCTGGAAGGGCGGGAAGGGTTCGGCGAGAAGGAGCACTCCCCCCTGGTGGATATCTATGAGACGGACAGTTCCTTCG
TGGTCGAGGCGGAACTTCCCGGCTGCGACGTGCAGGACATCTCCCTGAGTATCTGCTGCTCCACCTTGGTCGTGGAAGGC
TCCACCCGCGAGGGCGCGCTTTCCGGCGTCAACTACAGCTGCCTTGAGCGCTCTGCCGGCCGCTTCTGCCGGGCCATCGA
ACTCCCGCCGGGAGCCGATCTGGAGCGGGTCTCGGCACGCTACCGGCGGGGGCTGCTCACCGTGGTCATCCCGTGGTGCA
AAGGGGAAAAGCCGCATATCCGGGAGATTCAGATAGAAGAGTAA

Upstream 100 bases:

>100_bases
CGGTCAGCCGTGGCCACCACGGGGGCCGGCCTTTTTGTATGTACTAAAGGCCCGGAGAACGTCCTGCCACCAGGGGCGTC
CGGCCGCCTTGAGGGGCGTA

Downstream 100 bases:

>100_bases
GGAGAGGTACATGGAAAACAGGCAGGAGACCGAAGAACTTAATATACCGGATGTTCTGCCGCTGCTCCCGGTGAGGGACG
TGGTTGTCTATCCCTACATG

Product: alpha-crystallin/Hsp20 family ATP-independent chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MAVIPKEPLEWLGLFRQQMDEIFRYLSTLEGREGFGEKEHSPLVDIYETDSSFVVEAELPGCDVQDISLSICCSTLVVEG
STREGALSGVNYSCLERSAGRFCRAIELPPGADLERVSARYRRGLLTVVIPWCKGEKPHIREIQIEE

Sequences:

>Translated_147_residues
MAVIPKEPLEWLGLFRQQMDEIFRYLSTLEGREGFGEKEHSPLVDIYETDSSFVVEAELPGCDVQDISLSICCSTLVVEG
STREGALSGVNYSCLERSAGRFCRAIELPPGADLERVSARYRRGLLTVVIPWCKGEKPHIREIQIEE
>Mature_146_residues
AVIPKEPLEWLGLFRQQMDEIFRYLSTLEGREGFGEKEHSPLVDIYETDSSFVVEAELPGCDVQDISLSICCSTLVVEGS
TREGALSGVNYSCLERSAGRFCRAIELPPGADLERVSARYRRGLLTVVIPWCKGEKPHIREIQIEE

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16521; Mature: 16390

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVIPKEPLEWLGLFRQQMDEIFRYLSTLEGREGFGEKEHSPLVDIYETDSSFVVEAELP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCC
GCDVQDISLSICCSTLVVEGSTREGALSGVNYSCLERSAGRFCRAIELPPGADLERVSAR
CCCHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHH
YRRGLLTVVIPWCKGEKPHIREIQIEE
HHCCEEEEEEECCCCCCCCCCEEEECC
>Mature Secondary Structure 
AVIPKEPLEWLGLFRQQMDEIFRYLSTLEGREGFGEKEHSPLVDIYETDSSFVVEAELP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCC
GCDVQDISLSICCSTLVVEGSTREGALSGVNYSCLERSAGRFCRAIELPPGADLERVSAR
CCCHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHH
YRRGLLTVVIPWCKGEKPHIREIQIEE
HHCCEEEEEEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA