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The map label for this gene is rlpA [C]

Identifier: 197116998

GI number: 197116998

Start: 721725

End: 722189

Strand: Direct

Name: rlpA [C]

Synonym: Gbem_0601

Alternate gene names: 197116998

Gene position: 721725-722189 (Clockwise)

Preceding gene: 197116997

Following gene: 197117000

Centisome position: 15.64

GC content: 56.56

Gene sequence:

>465_bases
ATGGCATCACCCGAGCAGAGCGGCAGGATGGTACGCATTTGCGCGTTCGTCTTGATGCTCTTCCCGATCCACACGCTTCC
CCTGCTGGCTGCAGAACAAGTAGAAAAAACCGCTGTAGAGGCATCTGTTGGAAAAGTAGAACCGCAACAAAAATCGGTGG
TGAACAAACTGGTAGGCATAGCGTCGTACTATGCCAGCAAGTTCCACGGGAGACGGACCACGTCCGGGGAAAGGTATCAT
CCTGAAAAGATGACCGCCGCCCATCACAGCCTCCCGCTGGGGACCAGGGTTCGGGTCAGGAACCTCGCCAACGATAAGGA
AGTCACGGTTGTGATCAACGACCGCTGCCGCAAAAAAAGCGTACCGTTCATCGATCTGTCACGCGCTGCGGCAAGGAAAC
TGGGTTTTCTCGGTTCGGGGGTGACCAAGGTGGCCATCATCCCGCTCCCCGCGGAAGAGTCCTAG

Upstream 100 bases:

>100_bases
ATCGGCAACTCGGCAGGTTAGGGCGCTGCGGGCTCCTGAAAGCTTGACTTAAGGCCGAGAGCGTGCTATACGGGAGCCTC
GCCCAACAAAGGAGGTGCGC

Downstream 100 bases:

>100_bases
TAAAAATTCATACATCTGGGCGAACAGACGGAAAAGGCCGGGGCATAGTTCCCCGGCCTTTTCTCGTTCGTGCGTATGAT
TCCGCCAATGAAAAGTAGCC

Product: rare lipoprotein A-like double-psi beta-barrel domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MASPEQSGRMVRICAFVLMLFPIHTLPLLAAEQVEKTAVEASVGKVEPQQKSVVNKLVGIASYYASKFHGRRTTSGERYH
PEKMTAAHHSLPLGTRVRVRNLANDKEVTVVINDRCRKKSVPFIDLSRAAARKLGFLGSGVTKVAIIPLPAEES

Sequences:

>Translated_154_residues
MASPEQSGRMVRICAFVLMLFPIHTLPLLAAEQVEKTAVEASVGKVEPQQKSVVNKLVGIASYYASKFHGRRTTSGERYH
PEKMTAAHHSLPLGTRVRVRNLANDKEVTVVINDRCRKKSVPFIDLSRAAARKLGFLGSGVTKVAIIPLPAEES
>Mature_153_residues
ASPEQSGRMVRICAFVLMLFPIHTLPLLAAEQVEKTAVEASVGKVEPQQKSVVNKLVGIASYYASKFHGRRTTSGERYHP
EKMTAAHHSLPLGTRVRVRNLANDKEVTVVINDRCRKKSVPFIDLSRAAARKLGFLGSGVTKVAIIPLPAEES

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=91, Percent_Identity=41.7582417582418, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 16877; Mature: 16746

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPEQSGRMVRICAFVLMLFPIHTLPLLAAEQVEKTAVEASVGKVEPQQKSVVNKLVGI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ASYYASKFHGRRTTSGERYHPEKMTAAHHSLPLGTRVRVRNLANDKEVTVVINDRCRKKS
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEECCCCCCCC
VPFIDLSRAAARKLGFLGSGVTKVAIIPLPAEES
CCEEEHHHHHHHHHHCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
ASPEQSGRMVRICAFVLMLFPIHTLPLLAAEQVEKTAVEASVGKVEPQQKSVVNKLVGI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ASYYASKFHGRRTTSGERYHPEKMTAAHHSLPLGTRVRVRNLANDKEVTVVINDRCRKKS
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEECCCCCCCC
VPFIDLSRAAARKLGFLGSGVTKVAIIPLPAEES
CCEEEHHHHHHHHHHCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]