| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116972
Identifier: 197116972
GI number: 197116972
Start: 697893
End: 698330
Strand: Reverse
Name: 197116972
Synonym: Gbem_0575
Alternate gene names: NA
Gene position: 698330-697893 (Counterclockwise)
Preceding gene: 197116973
Following gene: 197116971
Centisome position: 15.13
GC content: 64.38
Gene sequence:
>438_bases ATGAGCGCTGTGAAGCGATACCTTCCTGTCGCCGTCCGGATCGCTCTGGGCGGGATATTCATCTACGCTGCGCTCCCGAA GATCGCCGACCCGGTCACCTTCGCCGGGAGCGTGGCCAGCTACCAGATCCTCCCCTACTTCTGGAGCTACTTCACCGCGG CGGTGCTTCCCTTCCTGGAACTGATCTGCGGAGTGCTGCTGGTGTCGGGATACCGGGTCAGGGCTTGCGCTCTCATCGTT GCGGCGCTGAACGTGGTCTTCATGGCAGCTCTCGCTTCGCTGATCGTGCGCGGGCTCGACATCGACTGCGGTTGCTTCGG CGGGGGCAAGACCTCCCCCTGGCTCGCCCTGTCGCGGGATGCTGTGTTCCTGGCGATGGCGGGAGCCGTGCTCTGGTTCG AGGAAAAAAGAACCCCTCCCCCCGTGGTCCGCAGCTAG
Upstream 100 bases:
>100_bases CTAAGCTCCTGATCGGTTCCGGATATGGCTCGGTCTACGTTTTCGAAGGGGGACTTCCTGAATGGCGGGACGCGGGCTAC CCGTTAGCGAAGGGGGAACG
Downstream 100 bases:
>100_bases CAAACCCTCCAGAAATCCTCAAGCGTCTCTCTCTTTTCGCACCACGCCGGCGGTTGTCCCAGGCGCGCTTCCGATTTTGG CGCCGCCCCCGGCCTTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Methylamine Utilization Protein MauE; Methylamine Utilization MauE; Type IV Conjugative Transfer System Protein TraL; DoxX Subfamily
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSAVKRYLPVAVRIALGGIFIYAALPKIADPVTFAGSVASYQILPYFWSYFTAAVLPFLELICGVLLVSGYRVRACALIV AALNVVFMAALASLIVRGLDIDCGCFGGGKTSPWLALSRDAVFLAMAGAVLWFEEKRTPPPVVRS
Sequences:
>Translated_145_residues MSAVKRYLPVAVRIALGGIFIYAALPKIADPVTFAGSVASYQILPYFWSYFTAAVLPFLELICGVLLVSGYRVRACALIV AALNVVFMAALASLIVRGLDIDCGCFGGGKTSPWLALSRDAVFLAMAGAVLWFEEKRTPPPVVRS >Mature_144_residues SAVKRYLPVAVRIALGGIFIYAALPKIADPVTFAGSVASYQILPYFWSYFTAAVLPFLELICGVLLVSGYRVRACALIVA ALNVVFMAALASLIVRGLDIDCGCFGGGKTSPWLALSRDAVFLAMAGAVLWFEEKRTPPPVVRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15533; Mature: 15402
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVKRYLPVAVRIALGGIFIYAALPKIADPVTFAGSVASYQILPYFWSYFTAAVLPFLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LICGVLLVSGYRVRACALIVAALNVVFMAALASLIVRGLDIDCGCFGGGKTSPWLALSRD HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCC AVFLAMAGAVLWFEEKRTPPPVVRS HHHHHHHHHHHEECCCCCCCCCCCC >Mature Secondary Structure SAVKRYLPVAVRIALGGIFIYAALPKIADPVTFAGSVASYQILPYFWSYFTAAVLPFLE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LICGVLLVSGYRVRACALIVAALNVVFMAALASLIVRGLDIDCGCFGGGKTSPWLALSRD HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCC AVFLAMAGAVLWFEEKRTPPPVVRS HHHHHHHHHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA