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The map label for this gene is elbB [H]

Identifier: 197116948

GI number: 197116948

Start: 662805

End: 663461

Strand: Reverse

Name: elbB [H]

Synonym: Gbem_0550

Alternate gene names: 197116948

Gene position: 663461-662805 (Counterclockwise)

Preceding gene: 197116950

Following gene: 197116947

Centisome position: 14.38

GC content: 64.23

Gene sequence:

>657_bases
ATGAAAAGGATAGGCGTGGTACTTTCCGGCTGCGGAGTGCGTGACGGCAGCGAGATACACGAGGCGGTGCTGGCACTTTT
GGCGATTGACAGAAGCGGCGCCAAGGCCGTCTGCCTCGCACCCGATATCGACTGCGACGAAGTGAACCACCTGACCATGC
AGGAAACCGGCGCCAAGAGGAAGGTCCTGGTGGAGTCGGCCCGCATCGCCCGCGGCGAGGTGAGCGACGTTAAGAATGCC
AAGGCATCCGACCTCGACGCCGTCGTTTTCCCCGGCGGCTTCGGCGCCGCCAAGAACCTGTGCAACTTCGGCCAAAAGGG
GGCCGACGGGATGGTGCAACCCGACGTGCTCAGGCTGGTAAGGGAGATGTCGGCGGCGAAGAAGCCGATCTGCGCCATCT
GCATCGCACCTTCGGTAGTGGCGCTGGCGCTGGGGAAGGAGCTCTCCCCCCGGCTCACCATAGGTAACGACCCTGGCACC
GCCGGGGCGATTTCCGCCACCGGCAGCAAGCACGTCGACTGCCCCGCAGACGAGATCGTAGTGGACCGGGAAAACCTGAT
CGTGTCGACCCCGGCCTACATGCTGGCCGGCAGCATATCCGAGGCCGCCAGGGGGATCGAGAAGGCGGTGCAGGCGACCC
TGGAACTGATAAAGTAG

Upstream 100 bases:

>100_bases
GCGGGGCGGCGAGGTTACACATTAAAGGCCTTGACAGTGTAAACGCAGCGCATAGAATAGCGCAACTGAAGTGGAATCTA
CAAGACAGGAGGTATCGGGG

Downstream 100 bases:

>100_bases
TCCATCCCCATTCTTGTCTGACCGCCCAAGCGGCCCCCTTCTGGATCAGCTCCAACGTTCAGAGAGTGGGCCGTTTTTTT
GTGACTGACGTTTACCTGCA

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKRIGVVLSGCGVRDGSEIHEAVLALLAIDRSGAKAVCLAPDIDCDEVNHLTMQETGAKRKVLVESARIARGEVSDVKNA
KASDLDAVVFPGGFGAAKNLCNFGQKGADGMVQPDVLRLVREMSAAKKPICAICIAPSVVALALGKELSPRLTIGNDPGT
AGAISATGSKHVDCPADEIVVDRENLIVSTPAYMLAGSISEAARGIEKAVQATLELIK

Sequences:

>Translated_218_residues
MKRIGVVLSGCGVRDGSEIHEAVLALLAIDRSGAKAVCLAPDIDCDEVNHLTMQETGAKRKVLVESARIARGEVSDVKNA
KASDLDAVVFPGGFGAAKNLCNFGQKGADGMVQPDVLRLVREMSAAKKPICAICIAPSVVALALGKELSPRLTIGNDPGT
AGAISATGSKHVDCPADEIVVDRENLIVSTPAYMLAGSISEAARGIEKAVQATLELIK
>Mature_218_residues
MKRIGVVLSGCGVRDGSEIHEAVLALLAIDRSGAKAVCLAPDIDCDEVNHLTMQETGAKRKVLVESARIARGEVSDVKNA
KASDLDAVVFPGGFGAAKNLCNFGQKGADGMVQPDVLRLVREMSAAKKPICAICIAPSVVALALGKELSPRLTIGNDPGT
AGAISATGSKHVDCPADEIVVDRENLIVSTPAYMLAGSISEAARGIEKAVQATLELIK

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=226, Percent_Identity=42.9203539823009, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI296531408, Length=226, Percent_Identity=38.4955752212389, Blast_Score=124, Evalue=8e-29,
Organism=Escherichia coli, GI87082228, Length=217, Percent_Identity=53.9170506912442, Blast_Score=218, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22585; Mature: 22585

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIGVVLSGCGVRDGSEIHEAVLALLAIDRSGAKAVCLAPDIDCDEVNHLTMQETGAKR
CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCEEHHHCCCHH
KVLVESARIARGEVSDVKNAKASDLDAVVFPGGFGAAKNLCNFGQKGADGMVQPDVLRLV
HHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHH
REMSAAKKPICAICIAPSVVALALGKELSPRLTIGNDPGTAGAISATGSKHVDCPADEIV
HHHHHHCCCEEEEEHHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCCCCCCCCCHHHEE
VDRENLIVSTPAYMLAGSISEAARGIEKAVQATLELIK
EECCCEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKRIGVVLSGCGVRDGSEIHEAVLALLAIDRSGAKAVCLAPDIDCDEVNHLTMQETGAKR
CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCEEHHHCCCHH
KVLVESARIARGEVSDVKNAKASDLDAVVFPGGFGAAKNLCNFGQKGADGMVQPDVLRLV
HHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHH
REMSAAKKPICAICIAPSVVALALGKELSPRLTIGNDPGTAGAISATGSKHVDCPADEIV
HHHHHHCCCEEEEEHHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCCCCCCCCCHHHEE
VDRENLIVSTPAYMLAGSISEAARGIEKAVQATLELIK
EECCCEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]