| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is angR [H]
Identifier: 197116940
GI number: 197116940
Start: 654527
End: 656131
Strand: Reverse
Name: angR [H]
Synonym: Gbem_0542
Alternate gene names: 197116940
Gene position: 656131-654527 (Counterclockwise)
Preceding gene: 197116941
Following gene: 197116939
Centisome position: 14.22
GC content: 63.8
Gene sequence:
>1605_bases ATGTACCTACTGCAACGATTACTCACCCGAAGCGCCACCTCCTTCCCCGACAAAACCGCGGTCTCCTTCCGCAACGAGGA GCTCTCCTACGCCGAGCTCGAGGCGGCGAGCAACCAGCTAAGCGCAGCCCTGAAGGCGCACGGCGTGCAAAGAGGAGACA GGGTCGGAATCCTCATGAACAAATCGCTTGAATCCATCGTCTCCGTCTTTGGCATCCTGAAGGCGGGCGCGATCTACGTC CCACTGGACCCAGGGGCGCCGGCTAGCAGGCAGGCCTCCATCATCAGGCACTGCGGCATCGAGATCGTCCTCGCCGCGCC GCAACTGCTGGAGCAACTCCTGGCCGAGGCAGGGGAGGCCCCGCCGCTGCGCGCAGCCATCGTCACCGGCTCCCCGGCGG TGACACTCCCCCACCCGGCCGGCAGCATGAGCTGCAGCGGCTGGGACGAGATCCTAGGCGAGAGCTGCGAGTGCCCTGCG GACGACGGGCTTTGCGGCGCTGCTCCCGCCTATATCCTGCACACCTCAGGCTCCACAGGCTCACCCAAGGGGGTGGTGAT CTCCCACCTGAACGCCCTCACCTTCGTTGAGATGGCTGTCCGCTTCTTCGAGATATCGCCGCAGGACCGTCTGGCCAATC ACGCGCCGCTGCATTTCGACCTCTCCATCTTCGACATTTTCTGCGCCGCCAGAAGCGCTGCAACGATGGTGCTGATTCCC GATGCGCTCTCGGCCTTCCCGGTGCGCCTGGCGGATTTCATGCAGAGCGAGGGAGTCACGGTGTGGAACTCGGTGGCGTC GCTCCTTACCAAGCTCGCGGACCAGGGGGCGCTGGACCGGCTCACCCTGGACAGGCTGCGCCTGGTCCACTTCTCCGGGG ACCTGATGCCGGTCAAATACCTGAAGATCCTGAAGCAGTGCATGCCGGCTGCAGTCTTTTACAACATCTACGGCCAGACC GAGGCCAACTCCTCCCTCTATTTCAGGGTCCCGGATGTCGTGGAGGAAGCGGCCTGGAAGATCCCGATCGGGACCCCCTT CCCCAATTTCGAGGTGTTCGCTATCGACGAGGTGGGGAACGTGGTGACCGGCGCGGGAGAGGAGGGTGAGCTGCACGTTC TCAGCTCCACCGTGGCCTTGGGCTACTGGAACGACTGCGGCAGAACTCAGGCGCAGTTCACCCCGGATCCGCGCAACCCC TCCGCCCACGCCAGGGTGTACAAGACCGGGGACATGGCGCGCCTGGACGCCGCCGGCAACTTCGTCTTCGCCGGCCGCAA GGACCATATGGTGAAGAGCAAGGGGTTCCGGGTGGAGTTGGGCGAGATCGAAATCGTACTGAACAGCCACCCCGACATCC GGCAGGCGGTTGCGGTGGCCATCCCCGACGACCTCGCCGGAAGCAGGATCGTCGCTTACGTATGCCTGCGCGAAGGGGTC GAACTCGAGCCCCAAACACTGGTCGTTCATTGCAGCGACCATCTCCCGAAATACATGGTGCCGGAGCAGATCAGGTACCT CCCCTCCCTGCCGGTGACCTCCAACAGCAAGATAGACCGCAAGGCCTTGGTGCAGGCGTTTCTCGACGGGCCTGCTGAAC CATAA
Upstream 100 bases:
>100_bases CGCCATCGCCGGGAAGATCTACTCCGGCACCTCCGAGATCCAGCGCAACATCATCGCCACCTTCCTGGGGCTCTAGCGGA GGGGGCCCAGCGAGGCATCC
Downstream 100 bases:
>100_bases GGCGGGGGCACCGCCCCGCCTCCCCTCCTCTCTCCCTCCTGAGCCCCGCCCGGCCGATTCAAAGCAGATAATTAAAGCAC AATTAATTGATTTCACGGCG
Product: AMP-forming acyl-CoA synthetase
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: NA
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MYLLQRLLTRSATSFPDKTAVSFRNEELSYAELEAASNQLSAALKAHGVQRGDRVGILMNKSLESIVSVFGILKAGAIYV PLDPGAPASRQASIIRHCGIEIVLAAPQLLEQLLAEAGEAPPLRAAIVTGSPAVTLPHPAGSMSCSGWDEILGESCECPA DDGLCGAAPAYILHTSGSTGSPKGVVISHLNALTFVEMAVRFFEISPQDRLANHAPLHFDLSIFDIFCAARSAATMVLIP DALSAFPVRLADFMQSEGVTVWNSVASLLTKLADQGALDRLTLDRLRLVHFSGDLMPVKYLKILKQCMPAAVFYNIYGQT EANSSLYFRVPDVVEEAAWKIPIGTPFPNFEVFAIDEVGNVVTGAGEEGELHVLSSTVALGYWNDCGRTQAQFTPDPRNP SAHARVYKTGDMARLDAAGNFVFAGRKDHMVKSKGFRVELGEIEIVLNSHPDIRQAVAVAIPDDLAGSRIVAYVCLREGV ELEPQTLVVHCSDHLPKYMVPEQIRYLPSLPVTSNSKIDRKALVQAFLDGPAEP
Sequences:
>Translated_534_residues MYLLQRLLTRSATSFPDKTAVSFRNEELSYAELEAASNQLSAALKAHGVQRGDRVGILMNKSLESIVSVFGILKAGAIYV PLDPGAPASRQASIIRHCGIEIVLAAPQLLEQLLAEAGEAPPLRAAIVTGSPAVTLPHPAGSMSCSGWDEILGESCECPA DDGLCGAAPAYILHTSGSTGSPKGVVISHLNALTFVEMAVRFFEISPQDRLANHAPLHFDLSIFDIFCAARSAATMVLIP DALSAFPVRLADFMQSEGVTVWNSVASLLTKLADQGALDRLTLDRLRLVHFSGDLMPVKYLKILKQCMPAAVFYNIYGQT EANSSLYFRVPDVVEEAAWKIPIGTPFPNFEVFAIDEVGNVVTGAGEEGELHVLSSTVALGYWNDCGRTQAQFTPDPRNP SAHARVYKTGDMARLDAAGNFVFAGRKDHMVKSKGFRVELGEIEIVLNSHPDIRQAVAVAIPDDLAGSRIVAYVCLREGV ELEPQTLVVHCSDHLPKYMVPEQIRYLPSLPVTSNSKIDRKALVQAFLDGPAEP >Mature_534_residues MYLLQRLLTRSATSFPDKTAVSFRNEELSYAELEAASNQLSAALKAHGVQRGDRVGILMNKSLESIVSVFGILKAGAIYV PLDPGAPASRQASIIRHCGIEIVLAAPQLLEQLLAEAGEAPPLRAAIVTGSPAVTLPHPAGSMSCSGWDEILGESCECPA DDGLCGAAPAYILHTSGSTGSPKGVVISHLNALTFVEMAVRFFEISPQDRLANHAPLHFDLSIFDIFCAARSAATMVLIP DALSAFPVRLADFMQSEGVTVWNSVASLLTKLADQGALDRLTLDRLRLVHFSGDLMPVKYLKILKQCMPAAVFYNIYGQT EANSSLYFRVPDVVEEAAWKIPIGTPFPNFEVFAIDEVGNVVTGAGEEGELHVLSSTVALGYWNDCGRTQAQFTPDPRNP SAHARVYKTGDMARLDAAGNFVFAGRKDHMVKSKGFRVELGEIEIVLNSHPDIRQAVAVAIPDDLAGSRIVAYVCLREGV ELEPQTLVVHCSDHLPKYMVPEQIRYLPSLPVTSNSKIDRKALVQAFLDGPAEP
Specific function: According to Ref.3:an enzyme involved in the biosynthesis of anguibactin; an iron-binding siderophore [H]
COG id: COG1020
COG function: function code Q; Non-ribosomal peptide synthetase modules and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI187761345, Length=561, Percent_Identity=26.9162210338681, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI187761343, Length=561, Percent_Identity=26.9162210338681, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI45580730, Length=560, Percent_Identity=26.0714285714286, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI156151445, Length=547, Percent_Identity=22.1206581352834, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI28416953, Length=543, Percent_Identity=23.0202578268877, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI122937307, Length=511, Percent_Identity=23.4833659491194, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI38505220, Length=530, Percent_Identity=24.3396226415094, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI157311624, Length=528, Percent_Identity=21.969696969697, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI157311622, Length=528, Percent_Identity=21.969696969697, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI58082049, Length=534, Percent_Identity=22.6591760299625, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI42544132, Length=543, Percent_Identity=25.2302025782689, Blast_Score=93, Evalue=6e-19, Organism=Homo sapiens, GI227499619, Length=553, Percent_Identity=24.0506329113924, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI13325057, Length=534, Percent_Identity=25.6554307116105, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI13236579, Length=512, Percent_Identity=26.3671875, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI115511026, Length=234, Percent_Identity=26.0683760683761, Blast_Score=73, Evalue=6e-13, Organism=Escherichia coli, GI1786801, Length=551, Percent_Identity=28.6751361161525, Blast_Score=167, Evalue=2e-42, Organism=Escherichia coli, GI145693145, Length=536, Percent_Identity=25.9328358208955, Blast_Score=118, Evalue=9e-28, Organism=Escherichia coli, GI1788107, Length=555, Percent_Identity=25.4054054054054, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1790505, Length=561, Percent_Identity=23.5294117647059, Blast_Score=112, Evalue=8e-26, Organism=Escherichia coli, GI221142682, Length=523, Percent_Identity=27.7246653919694, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1786810, Length=540, Percent_Identity=23.5185185185185, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1786529, Length=565, Percent_Identity=22.1238938053097, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17560308, Length=554, Percent_Identity=24.187725631769, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI32563687, Length=513, Percent_Identity=22.0272904483431, Blast_Score=111, Evalue=9e-25, Organism=Caenorhabditis elegans, GI71994703, Length=551, Percent_Identity=22.5045372050817, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI71994694, Length=551, Percent_Identity=22.5045372050817, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI71994690, Length=551, Percent_Identity=22.5045372050817, Blast_Score=105, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17558820, Length=509, Percent_Identity=22.5933202357564, Blast_Score=105, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17531443, Length=548, Percent_Identity=22.2627737226277, Blast_Score=102, Evalue=7e-22, Organism=Caenorhabditis elegans, GI32564422, Length=372, Percent_Identity=22.3118279569892, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI32564420, Length=372, Percent_Identity=22.3118279569892, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17556356, Length=363, Percent_Identity=25.6198347107438, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6319591, Length=601, Percent_Identity=24.459234608985, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6323182, Length=566, Percent_Identity=24.5583038869258, Blast_Score=114, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6319699, Length=365, Percent_Identity=24.3835616438356, Blast_Score=110, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6319264, Length=562, Percent_Identity=24.1992882562278, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI24648676, Length=534, Percent_Identity=27.1535580524345, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI24581924, Length=553, Percent_Identity=24.2314647377938, Blast_Score=129, Evalue=7e-30, Organism=Drosophila melanogaster, GI24656500, Length=514, Percent_Identity=23.9299610894942, Blast_Score=96, Evalue=7e-20, Organism=Drosophila melanogaster, GI18859661, Length=527, Percent_Identity=23.9089184060721, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI21356947, Length=363, Percent_Identity=23.6914600550964, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI21355181, Length=527, Percent_Identity=20.8728652751423, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24648260, Length=369, Percent_Identity=23.5772357723577, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR006163 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 57645; Mature: 57645
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLLQRLLTRSATSFPDKTAVSFRNEELSYAELEAASNQLSAALKAHGVQRGDRVGILMN CHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC KSLESIVSVFGILKAGAIYVPLDPGAPASRQASIIRHCGIEIVLAAPQLLEQLLAEAGEA CCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCC PPLRAAIVTGSPAVTLPHPAGSMSCSGWDEILGESCECPADDGLCGAAPAYILHTSGSTG CCCEEEEEECCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCC SPKGVVISHLNALTFVEMAVRFFEISPQDRLANHAPLHFDLSIFDIFCAARSAATMVLIP CCCCCEEHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEHHHHHHHHHHHCCEEEEEEC DALSAFPVRLADFMQSEGVTVWNSVASLLTKLADQGALDRLTLDRLRLVHFSGDLMPVKY CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEECCCCCHHHH LKILKQCMPAAVFYNIYGQTEANSSLYFRVPDVVEEAAWKIPIGTPFPNFEVFAIDEVGN HHHHHHHCCHHEEEEECCCCCCCCEEEEECHHHHHHCCEECCCCCCCCCEEEEEECCCCC VVTGAGEEGELHVLSSTVALGYWNDCGRTQAQFTPDPRNPSAHARVYKTGDMARLDAAGN EEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCC FVFAGRKDHMVKSKGFRVELGEIEIVLNSHPDIRQAVAVAIPDDLAGSRIVAYVCLREGV EEEECCCCCEECCCCCEEEECEEEEEECCCCCHHHHEEEECCCCCCCCHHHHHHHHHCCC ELEPQTLVVHCSDHLPKYMVPEQIRYLPSLPVTSNSKIDRKALVQAFLDGPAEP CCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MYLLQRLLTRSATSFPDKTAVSFRNEELSYAELEAASNQLSAALKAHGVQRGDRVGILMN CHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC KSLESIVSVFGILKAGAIYVPLDPGAPASRQASIIRHCGIEIVLAAPQLLEQLLAEAGEA CCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCC PPLRAAIVTGSPAVTLPHPAGSMSCSGWDEILGESCECPADDGLCGAAPAYILHTSGSTG CCCEEEEEECCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCC SPKGVVISHLNALTFVEMAVRFFEISPQDRLANHAPLHFDLSIFDIFCAARSAATMVLIP CCCCCEEHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEHHHHHHHHHHHCCEEEEEEC DALSAFPVRLADFMQSEGVTVWNSVASLLTKLADQGALDRLTLDRLRLVHFSGDLMPVKY CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEECCCCCHHHH LKILKQCMPAAVFYNIYGQTEANSSLYFRVPDVVEEAAWKIPIGTPFPNFEVFAIDEVGN HHHHHHHCCHHEEEEECCCCCCCCEEEEECHHHHHHCCEECCCCCCCCCEEEEEECCCCC VVTGAGEEGELHVLSSTVALGYWNDCGRTQAQFTPDPRNPSAHARVYKTGDMARLDAAGN EEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCC FVFAGRKDHMVKSKGFRVELGEIEIVLNSHPDIRQAVAVAIPDDLAGSRIVAYVCLREGV EEEECCCCCEECCCCCEEEECEEEEEECCCCCHHHHEEEECCCCCCCCHHHHHHHHHCCC ELEPQTLVVHCSDHLPKYMVPEQIRYLPSLPVTSNSKIDRKALVQAFLDGPAEP CCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2311935; 8335354 [H]