Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116936

Identifier: 197116936

GI number: 197116936

Start: 649838

End: 651733

Strand: Reverse

Name: 197116936

Synonym: Gbem_0538

Alternate gene names: NA

Gene position: 651733-649838 (Counterclockwise)

Preceding gene: 197116937

Following gene: 197116935

Centisome position: 14.12

GC content: 63.4

Gene sequence:

>1896_bases
ATGGCCATCCCCCGCAGCGCCGTTTTCGCCACGCTTTGGCTCTTGCTCCTCTTTTCTCCTGCTGCCGCAGCAGCGCCTCC
TTCCCAGCCCGACCTCCTGACCGCCCGTGCCCGCAGCATGGGGCTTGCCGCCGAAAGGAACTGGCACATCCTCTTGCACT
ACAAGAAAACCTCGGGCGGCTTCAAGAGCAGGATCTCGGATCCGAACTTCTTCCTCTCCCCTGAAGGGCGCGAAAACCCC
GAGGCGGAACTGGAGGCCACCATCGCCGGGTTCTTCCAGCCCCGGAGCGTGGACGGAGAGCACCCCATCTGCCGATTCCC
GGCGCGGCTCCAGTGGCTTAAGGAACGTCTCGGCATCGGGCCGGGGGACCTCCAGGAGGTCGCCTGCCCGGCGCAAAAGG
AGCTGCTGCAAACGGTCGACGCGCGCTCGGCGGTGCTGGTCTTTCCGGTAGGGCACATCAACAGCCCGGCGTCCATGTTC
GGGCACACGCTGCTCAGATTCGACGGCCCCACTAAGAGCAACCTCATCTCCTTCGCCGTCAACTACGCCGCGGACGCCAA
CGACTCGAACGGGCTTCTTTACGCCTACAAGGGGCTCTTCGGCAAGTACAAGGGGTACTACTCCCTGATGCCCTACTACT
TGAAGGTGAAGGAGTACGGCGACATGGAGCACCGGGACATGTGGGAATACCGGCTCAGGCTCTCCCAGGCGGAAGTGGAG
CGGATGCTCCTGCACACCCTGGAGTTGGAGCGGATCTCCTCGGATTACTTCTTCCTGGATGAGAATTGCGCCTTCAACCT
GCTGTTCCTGATCGAGGCGGCGCGCCCGACCCTGCACTTAACCGACCAGACCGGCCTTCTGGTACATCCCACCGACACCA
TAGAACTCACCAAACAAAGCGGGATCCTGGAAGAGGGGGTTTACCGCCCGTCCCAGGGGGCGAGGATCGTGAAGATGGCG
TCGCTTCTGGACGGCGAGCGCCAAAAGGCTGCCCTGAAGCTGGGCCAGGGGGAAAGCGATCCTGCCGTGGCTGCGAACGC
GGGCGCATCGGTTGAGGAGCAAAGGGGGATACTGGACCTGGCGGCGGAGGTGGTCCAGTTGAGGTATGCCCGCAAGGAAC
TGGAGAAGGACGAATACAACAAGCTGTACCTGAAGATCCTGGCGCAAAGAAGCCGGCTCGGGAAGGGCGAGGATGATGCC
TACGCTGTCGCGCCCCCGTCCCCTCCCGATGCCGGCCACAAGACCACCAAGTTGGGAGTCGGGGGAGGAATCCGGCGGGA
CGAGTGGTTCGGCGAGGTTAGGCTGCAGCCCGAGTTCCACGACATGCTCGATCCGGACCAGGGGTACATCCGGGGGGCGC
AGATAAAGTTCCTGGAAACCGCGCTGCGCTATGCGCCGGAGCACGAGCGGTTCTGGCTGAAGAGCATGCACCTTGTGGAC
ATCTTCTCAACCGCCCCCAGGGACCGCTTTTTCACTCCGCTCTCCTGGAAGGTGGCCGCCGGCTGGGACACCGAGGCCAT
GAAGGACGGCAGGGATTCCCTCATCTTCCGGGTCAACACCGGCGGGGGGTTCGCCGCGCGCTCTCCCTTCGGGGGAATTG
TGCATGCCCTGGGGGAGGTGGACCTGAACGCGGGGAGAAGGTTCGCAGGCAACGTCGCTGCGGGGCCGGGGGTGAGCCTG
GGAGCCCTGGAGCAGCTTACCGCTTGGTGGAAGCTGCAGTTGCGGGGGGAGGGATTCTACTATCTGCTGGGCGACAACCG
CCTCGCGCTTAAGGGGACCGTGGCGCAGAACTTCCGGCTGGCGCGAAACGACTCGTTGAGCCTGGAATTAAGCTATCAGG
AGGTCCAGGGGCACCCGGTACGGGAAGCAACGATGTTGTGGAACCGCTACTTTTGA

Upstream 100 bases:

>100_bases
TCCAAAGTGGTCAAATGCCGGGTGCACGGCCTACGCCGTGCACCTTTTTTAATCCGGGCGGATGCCGCCCGACTTCCTGT
CCCGAAAGCAGGGTTCTTCC

Downstream 100 bases:

>100_bases
AGGTCACCCACTGTCTTAGACAACTCGGTTCCATGTCTTAGCAAAAGCATTGACATATTTTTTGTAGCTGTGCATAATCT
GAACAAAATAACATCCCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 631; Mature: 630

Protein sequence:

>631_residues
MAIPRSAVFATLWLLLLFSPAAAAAPPSQPDLLTARARSMGLAAERNWHILLHYKKTSGGFKSRISDPNFFLSPEGRENP
EAELEATIAGFFQPRSVDGEHPICRFPARLQWLKERLGIGPGDLQEVACPAQKELLQTVDARSAVLVFPVGHINSPASMF
GHTLLRFDGPTKSNLISFAVNYAADANDSNGLLYAYKGLFGKYKGYYSLMPYYLKVKEYGDMEHRDMWEYRLRLSQAEVE
RMLLHTLELERISSDYFFLDENCAFNLLFLIEAARPTLHLTDQTGLLVHPTDTIELTKQSGILEEGVYRPSQGARIVKMA
SLLDGERQKAALKLGQGESDPAVAANAGASVEEQRGILDLAAEVVQLRYARKELEKDEYNKLYLKILAQRSRLGKGEDDA
YAVAPPSPPDAGHKTTKLGVGGGIRRDEWFGEVRLQPEFHDMLDPDQGYIRGAQIKFLETALRYAPEHERFWLKSMHLVD
IFSTAPRDRFFTPLSWKVAAGWDTEAMKDGRDSLIFRVNTGGGFAARSPFGGIVHALGEVDLNAGRRFAGNVAAGPGVSL
GALEQLTAWWKLQLRGEGFYYLLGDNRLALKGTVAQNFRLARNDSLSLELSYQEVQGHPVREATMLWNRYF

Sequences:

>Translated_631_residues
MAIPRSAVFATLWLLLLFSPAAAAAPPSQPDLLTARARSMGLAAERNWHILLHYKKTSGGFKSRISDPNFFLSPEGRENP
EAELEATIAGFFQPRSVDGEHPICRFPARLQWLKERLGIGPGDLQEVACPAQKELLQTVDARSAVLVFPVGHINSPASMF
GHTLLRFDGPTKSNLISFAVNYAADANDSNGLLYAYKGLFGKYKGYYSLMPYYLKVKEYGDMEHRDMWEYRLRLSQAEVE
RMLLHTLELERISSDYFFLDENCAFNLLFLIEAARPTLHLTDQTGLLVHPTDTIELTKQSGILEEGVYRPSQGARIVKMA
SLLDGERQKAALKLGQGESDPAVAANAGASVEEQRGILDLAAEVVQLRYARKELEKDEYNKLYLKILAQRSRLGKGEDDA
YAVAPPSPPDAGHKTTKLGVGGGIRRDEWFGEVRLQPEFHDMLDPDQGYIRGAQIKFLETALRYAPEHERFWLKSMHLVD
IFSTAPRDRFFTPLSWKVAAGWDTEAMKDGRDSLIFRVNTGGGFAARSPFGGIVHALGEVDLNAGRRFAGNVAAGPGVSL
GALEQLTAWWKLQLRGEGFYYLLGDNRLALKGTVAQNFRLARNDSLSLELSYQEVQGHPVREATMLWNRYF
>Mature_630_residues
AIPRSAVFATLWLLLLFSPAAAAAPPSQPDLLTARARSMGLAAERNWHILLHYKKTSGGFKSRISDPNFFLSPEGRENPE
AELEATIAGFFQPRSVDGEHPICRFPARLQWLKERLGIGPGDLQEVACPAQKELLQTVDARSAVLVFPVGHINSPASMFG
HTLLRFDGPTKSNLISFAVNYAADANDSNGLLYAYKGLFGKYKGYYSLMPYYLKVKEYGDMEHRDMWEYRLRLSQAEVER
MLLHTLELERISSDYFFLDENCAFNLLFLIEAARPTLHLTDQTGLLVHPTDTIELTKQSGILEEGVYRPSQGARIVKMAS
LLDGERQKAALKLGQGESDPAVAANAGASVEEQRGILDLAAEVVQLRYARKELEKDEYNKLYLKILAQRSRLGKGEDDAY
AVAPPSPPDAGHKTTKLGVGGGIRRDEWFGEVRLQPEFHDMLDPDQGYIRGAQIKFLETALRYAPEHERFWLKSMHLVDI
FSTAPRDRFFTPLSWKVAAGWDTEAMKDGRDSLIFRVNTGGGFAARSPFGGIVHALGEVDLNAGRRFAGNVAAGPGVSLG
ALEQLTAWWKLQLRGEGFYYLLGDNRLALKGTVAQNFRLARNDSLSLELSYQEVQGHPVREATMLWNRYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70460; Mature: 70329

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPRSAVFATLWLLLLFSPAAAAAPPSQPDLLTARARSMGLAAERNWHILLHYKKTSGG
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEECCCEEEEEEEEECCCC
FKSRISDPNFFLSPEGRENPEAELEATIAGFFQPRSVDGEHPICRFPARLQWLKERLGIG
HHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHCCC
PGDLQEVACPAQKELLQTVDARSAVLVFPVGHINSPASMFGHTLLRFDGPTKSNLISFAV
CCCHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCEEEEECCCCCCCCEEEEE
NYAADANDSNGLLYAYKGLFGKYKGYYSLMPYYLKVKEYGDMEHRDMWEYRLRLSQAEVE
EEECCCCCCCCEEEEECCHHHHCCCHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
RMLLHTLELERISSDYFFLDENCAFNLLFLIEAARPTLHLTDQTGLLVHPTDTIELTKQS
HHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCEEEEECCCCEEECCCCCEEEEHHC
GILEEGVYRPSQGARIVKMASLLDGERQKAALKLGQGESDPAVAANAGASVEEQRGILDL
CCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEECCCCCHHHHCCHHHH
AAEVVQLRYARKELEKDEYNKLYLKILAQRSRLGKGEDDAYAVAPPSPPDAGHKTTKLGV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEC
GGGIRRDEWFGEVRLQPEFHDMLDPDQGYIRGAQIKFLETALRYAPEHERFWLKSMHLVD
CCCCCCCCCCCEEEECCHHHHCCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHH
IFSTAPRDRFFTPLSWKVAAGWDTEAMKDGRDSLIFRVNTGGGFAARSPFGGIVHALGEV
HHHCCCCCCCCCCCCEEEECCCCHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCC
DLNAGRRFAGNVAAGPGVSLGALEQLTAWWKLQLRGEGFYYLLGDNRLALKGTVAQNFRL
CCCCCCEECCCCCCCCCCCHHHHHHHCEEEEEEEECCEEEEEECCCEEEEEEEHHHCEEE
ARNDSLSLELSYQEVQGHPVREATMLWNRYF
ECCCCEEEEEEHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
AIPRSAVFATLWLLLLFSPAAAAAPPSQPDLLTARARSMGLAAERNWHILLHYKKTSGG
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEECCCEEEEEEEEECCCC
FKSRISDPNFFLSPEGRENPEAELEATIAGFFQPRSVDGEHPICRFPARLQWLKERLGIG
HHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHCCC
PGDLQEVACPAQKELLQTVDARSAVLVFPVGHINSPASMFGHTLLRFDGPTKSNLISFAV
CCCHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCEEEEECCCCCCCCEEEEE
NYAADANDSNGLLYAYKGLFGKYKGYYSLMPYYLKVKEYGDMEHRDMWEYRLRLSQAEVE
EEECCCCCCCCEEEEECCHHHHCCCHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
RMLLHTLELERISSDYFFLDENCAFNLLFLIEAARPTLHLTDQTGLLVHPTDTIELTKQS
HHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCEEEEECCCCEEECCCCCEEEEHHC
GILEEGVYRPSQGARIVKMASLLDGERQKAALKLGQGESDPAVAANAGASVEEQRGILDL
CCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEECCCCCHHHHCCHHHH
AAEVVQLRYARKELEKDEYNKLYLKILAQRSRLGKGEDDAYAVAPPSPPDAGHKTTKLGV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEC
GGGIRRDEWFGEVRLQPEFHDMLDPDQGYIRGAQIKFLETALRYAPEHERFWLKSMHLVD
CCCCCCCCCCCEEEECCHHHHCCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHH
IFSTAPRDRFFTPLSWKVAAGWDTEAMKDGRDSLIFRVNTGGGFAARSPFGGIVHALGEV
HHHCCCCCCCCCCCCEEEECCCCHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCC
DLNAGRRFAGNVAAGPGVSLGALEQLTAWWKLQLRGEGFYYLLGDNRLALKGTVAQNFRL
CCCCCCEECCCCCCCCCCCHHHHHHHCEEEEEEEECCEEEEEECCCEEEEEEEHHHCEEE
ARNDSLSLELSYQEVQGHPVREATMLWNRYF
ECCCCEEEEEEHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA