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The map label for this gene is 197116931

Identifier: 197116931

GI number: 197116931

Start: 643297

End: 644247

Strand: Reverse

Name: 197116931

Synonym: Gbem_0533

Alternate gene names: NA

Gene position: 644247-643297 (Counterclockwise)

Preceding gene: 197116932

Following gene: 197116930

Centisome position: 13.96

GC content: 58.99

Gene sequence:

>951_bases
ATGAAAGACCTTTACTGGCGGGCCATCAGTATTGACAGCATCGACCCTGATTACTTCCCATCCGTACCGCTGTTCATGAA
AACCGCCGGGAACTATGTCCTGTACAAGGACGCAGAGAGGAAGTTTTCCTCGGCCGATCGCAGCCGGATGGACCGGACCG
GCACCGAGTTCATGTACGTCAGATCGGGGGATATGTCGGAGATCTCCACCTATCTGGAGAACAGCCTGAAGGACATGCTG
ACCAGGGACGACCTCGACAGCGAAAGAAAGGGGAGGATCCTCTACCAGACCTCCATCAACTACCTGGTGGATGCCTTCGA
GGCGCCGGAGGAGGCGTCTAATCTGGAGCGCTGCCGGCAACTGGTCCAGCACATGATGTCTTATCTGAGCAACGAGCCCC
ACGCACTCAAATCGGTAGGGTCGGTCGTGGAGCACAACCTCTACATCTTCTCCCACAGCGTACAGGTGGCCGCGCTGAAC
CTGCTCGCCCACGAGAAGCTGTTCCAGGTCCATCCCGACGAGTTGATAGACGTCGGCATCGGCTCCATGCTCCACGACTA
CGGGATGATCTTCGTCACCAACGACATCCTGAACAAGCCGGACGCCCTCTCCGACGTCGAGTACTACAAGATCAAGCAGC
ACACCCAGAAGGGGTACGAATACCTGAAGGACAGCGGGAGATTCGGCGACATGTCGCTCACCATCGTGCGCCACCATCAT
GAAAGGTACGACGGCAACGGCTACCCCACCGGGATGAAGGGGGACCAGATCCCCCGTAGCGCCCAGCTCTCCGCCATGTG
CGACATGTACAGCGCCCTAACCCTCGACCGGGCCTACCGCAAGGCGGTTTCGCACCAGGAGGCGATCAAGGCGATGCGGA
CGGAAGCGGGAGCTTTCAACGCCTCGCTGCTCGGAAACTTCGTCGAGCTGGTGACCGCCCAGAAGGAGTAG

Upstream 100 bases:

>100_bases
CCTGAATGCGACAAAATGGGGCGGCTCAGAGTATGGCAGCGAGATCTTCCAAGCCAATTGAGAGTCAGCTAAAAATACTG
AGAGATGAAGAGAGGACGTT

Downstream 100 bases:

>100_bases
CGGAGTTCGGTGCTCATGGGACGGGAGGGAGGTGGGCCTATCATGAGGAGGTTGACAAACCGGTTCAAAGGCGTATCATC
GCCCGGAATTTAGCAGCCGA

Product: cyclic diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKDLYWRAISIDSIDPDYFPSVPLFMKTAGNYVLYKDAERKFSSADRSRMDRTGTEFMYVRSGDMSEISTYLENSLKDML
TRDDLDSERKGRILYQTSINYLVDAFEAPEEASNLERCRQLVQHMMSYLSNEPHALKSVGSVVEHNLYIFSHSVQVAALN
LLAHEKLFQVHPDELIDVGIGSMLHDYGMIFVTNDILNKPDALSDVEYYKIKQHTQKGYEYLKDSGRFGDMSLTIVRHHH
ERYDGNGYPTGMKGDQIPRSAQLSAMCDMYSALTLDRAYRKAVSHQEAIKAMRTEAGAFNASLLGNFVELVTAQKE

Sequences:

>Translated_316_residues
MKDLYWRAISIDSIDPDYFPSVPLFMKTAGNYVLYKDAERKFSSADRSRMDRTGTEFMYVRSGDMSEISTYLENSLKDML
TRDDLDSERKGRILYQTSINYLVDAFEAPEEASNLERCRQLVQHMMSYLSNEPHALKSVGSVVEHNLYIFSHSVQVAALN
LLAHEKLFQVHPDELIDVGIGSMLHDYGMIFVTNDILNKPDALSDVEYYKIKQHTQKGYEYLKDSGRFGDMSLTIVRHHH
ERYDGNGYPTGMKGDQIPRSAQLSAMCDMYSALTLDRAYRKAVSHQEAIKAMRTEAGAFNASLLGNFVELVTAQKE
>Mature_316_residues
MKDLYWRAISIDSIDPDYFPSVPLFMKTAGNYVLYKDAERKFSSADRSRMDRTGTEFMYVRSGDMSEISTYLENSLKDML
TRDDLDSERKGRILYQTSINYLVDAFEAPEEASNLERCRQLVQHMMSYLSNEPHALKSVGSVVEHNLYIFSHSVQVAALN
LLAHEKLFQVHPDELIDVGIGSMLHDYGMIFVTNDILNKPDALSDVEYYKIKQHTQKGYEYLKDSGRFGDMSLTIVRHHH
ERYDGNGYPTGMKGDQIPRSAQLSAMCDMYSALTLDRAYRKAVSHQEAIKAMRTEAGAFNASLLGNFVELVTAQKE

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36080; Mature: 36080

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLYWRAISIDSIDPDYFPSVPLFMKTAGNYVLYKDAERKFSSADRSRMDRTGTEFMYV
CCCCEEEEEEECCCCCCCCCCCCHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEE
RSGDMSEISTYLENSLKDMLTRDDLDSERKGRILYQTSINYLVDAFEAPEEASNLERCRQ
ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHH
LVQHMMSYLSNEPHALKSVGSVVEHNLYIFSHSVQVAALNLLAHEKLFQVHPDELIDVGI
HHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHH
GSMLHDYGMIFVTNDILNKPDALSDVEYYKIKQHTQKGYEYLKDSGRFGDMSLTIVRHHH
HHHHHHCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHH
ERYDGNGYPTGMKGDQIPRSAQLSAMCDMYSALTLDRAYRKAVSHQEAIKAMRTEAGAFN
HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ASLLGNFVELVTAQKE
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKDLYWRAISIDSIDPDYFPSVPLFMKTAGNYVLYKDAERKFSSADRSRMDRTGTEFMYV
CCCCEEEEEEECCCCCCCCCCCCHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEE
RSGDMSEISTYLENSLKDMLTRDDLDSERKGRILYQTSINYLVDAFEAPEEASNLERCRQ
ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHH
LVQHMMSYLSNEPHALKSVGSVVEHNLYIFSHSVQVAALNLLAHEKLFQVHPDELIDVGI
HHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHH
GSMLHDYGMIFVTNDILNKPDALSDVEYYKIKQHTQKGYEYLKDSGRFGDMSLTIVRHHH
HHHHHHCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHH
ERYDGNGYPTGMKGDQIPRSAQLSAMCDMYSALTLDRAYRKAVSHQEAIKAMRTEAGAFN
HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ASLLGNFVELVTAQKE
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]