Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116917

Identifier: 197116917

GI number: 197116917

Start: 628013

End: 628732

Strand: Direct

Name: 197116917

Synonym: Gbem_0519

Alternate gene names: NA

Gene position: 628013-628732 (Clockwise)

Preceding gene: 197116916

Following gene: 197116920

Centisome position: 13.61

GC content: 62.22

Gene sequence:

>720_bases
ATGACGGCAGAAAAGGCGATGGGCGACCTTCTGGATATGGTTAAACAGCAGCAGGTTTTTCTCGAGATGTTCGTGCGGTC
CTGGGTCGACGACTATCGCTCCAGCGGCGGCGCAATCTTCTGCGGCAAGGGGTGTCGCAACTGCTGCAGTCTTGCCGTCC
ATACCGGCTTTGCCGAGGCACTTGCCGTCGCCCGGCAGCTGGACGAGACGCAGGGGAGGGCGGTCGAGAGTTACGCAATG
AAACTCAGGGAGCTGCTTAAGGGAGTGACCGAGCTTCCTGAATACCTGCGCCTGCACCGGCAGACCATGGGATTTTGCCC
GCTTTTGACCGATGCCGGCGCATGCGGCGTCTATCCGGTGCGCCCTCTGTCCTGCCGCTCGCTCATCTCCACCCGGGAGA
GCGTTTGGTGCGGCGCCGATTTCTCACAGCTTTCTCAGGCGGAACGGGAAGCGTTCGTGGCCGCGCTGGACCGGAAGGTG
GTTGCCTTCCCGAGCCACTACGTCGCAGTGCTCCAGGAGAGCGGGAAAGAACTGGAGGAAGCTGGCGCCAAAAACATGCG
TGAGCTTCTCGGATTCTCCCTCTATGGCAACCTCGGCGTCCTGGTCCATCTCTGCCGCAGCCACGGCTTTGCAGAGGCCT
GCCTGGAGGGGAAAAGTTCTGCTGCCGGCTGCATCGCCGGGGCGGGGTTCGACCATCCGCTGCTGCTGACTCTCACCTAG

Upstream 100 bases:

>100_bases
CGGCACGATCATGGCGGCCAGGCGAAAAAGAGCCACAGGAAGAAAAAGAAGCGCTGACCGGGGTCCTGTCACGGGAGATA
CCCCGGAAGAAAGGAAAGAG

Downstream 100 bases:

>100_bases
CCGGAAACCTTCTCTCCCAGCAGTGTCCGGTTAGGTCTTTGCACCACATGAATCAAGCAGTTTCCAACTTTCCCCCTCCC
TAGACGAGAGGGGGGGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTAEKAMGDLLDMVKQQQVFLEMFVRSWVDDYRSSGGAIFCGKGCRNCCSLAVHTGFAEALAVARQLDETQGRAVESYAM
KLRELLKGVTELPEYLRLHRQTMGFCPLLTDAGACGVYPVRPLSCRSLISTRESVWCGADFSQLSQAEREAFVAALDRKV
VAFPSHYVAVLQESGKELEEAGAKNMRELLGFSLYGNLGVLVHLCRSHGFAEACLEGKSSAAGCIAGAGFDHPLLLTLT

Sequences:

>Translated_239_residues
MTAEKAMGDLLDMVKQQQVFLEMFVRSWVDDYRSSGGAIFCGKGCRNCCSLAVHTGFAEALAVARQLDETQGRAVESYAM
KLRELLKGVTELPEYLRLHRQTMGFCPLLTDAGACGVYPVRPLSCRSLISTRESVWCGADFSQLSQAEREAFVAALDRKV
VAFPSHYVAVLQESGKELEEAGAKNMRELLGFSLYGNLGVLVHLCRSHGFAEACLEGKSSAAGCIAGAGFDHPLLLTLT
>Mature_238_residues
TAEKAMGDLLDMVKQQQVFLEMFVRSWVDDYRSSGGAIFCGKGCRNCCSLAVHTGFAEALAVARQLDETQGRAVESYAMK
LRELLKGVTELPEYLRLHRQTMGFCPLLTDAGACGVYPVRPLSCRSLISTRESVWCGADFSQLSQAEREAFVAALDRKVV
AFPSHYVAVLQESGKELEEAGAKNMRELLGFSLYGNLGVLVHLCRSHGFAEACLEGKSSAAGCIAGAGFDHPLLLTLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25995; Mature: 25864

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEKAMGDLLDMVKQQQVFLEMFVRSWVDDYRSSGGAIFCGKGCRNCCSLAVHTGFAEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHH
LAVARQLDETQGRAVESYAMKLRELLKGVTELPEYLRLHRQTMGFCPLLTDAGACGVYPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
RPLSCRSLISTRESVWCGADFSQLSQAEREAFVAALDRKVVAFPSHYVAVLQESGKELEE
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AGAKNMRELLGFSLYGNLGVLVHLCRSHGFAEACLEGKSSAAGCIAGAGFDHPLLLTLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHCCCCCCCCEEEEEC
>Mature Secondary Structure 
TAEKAMGDLLDMVKQQQVFLEMFVRSWVDDYRSSGGAIFCGKGCRNCCSLAVHTGFAEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHH
LAVARQLDETQGRAVESYAMKLRELLKGVTELPEYLRLHRQTMGFCPLLTDAGACGVYPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
RPLSCRSLISTRESVWCGADFSQLSQAEREAFVAALDRKVVAFPSHYVAVLQESGKELEE
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AGAKNMRELLGFSLYGNLGVLVHLCRSHGFAEACLEGKSSAAGCIAGAGFDHPLLLTLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA