| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116916
Identifier: 197116916
GI number: 197116916
Start: 627808
End: 627969
Strand: Direct
Name: 197116916
Synonym: Gbem_0518
Alternate gene names: NA
Gene position: 627808-627969 (Clockwise)
Preceding gene: 197116915
Following gene: 197116917
Centisome position: 13.6
GC content: 55.56
Gene sequence:
>162_bases ATGTCCACACCACTGATTGCTCTGGCAGTGATTCTCGCGGTATTCGCCGTGGTGTTAATACCTTTGATGATGGTGAAGTC GGGCCAGGCACCGGTAGACGAGCCGCGGCACGATCATGGCGGCCAGGCGAAAAAGAGCCACAGGAAGAAAAAGAAGCGCT GA
Upstream 100 bases:
>100_bases TTCTTGCCATCCTGTCGCAATTAGCTTATTTTAAGTGCCGTTTTTCCGGCGTGTTGGTGCGCGCCCATCACCAGGATCTC AAGAACCGTTAGGAGGGATT
Downstream 100 bases:
>100_bases CCGGGGTCCTGTCACGGGAGATACCCCGGAAGAAAGGAAAGAGATGACGGCAGAAAAGGCGATGGGCGACCTTCTGGATA TGGTTAAACAGCAGCAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 52
Protein sequence:
>53_residues MSTPLIALAVILAVFAVVLIPLMMVKSGQAPVDEPRHDHGGQAKKSHRKKKKR
Sequences:
>Translated_53_residues MSTPLIALAVILAVFAVVLIPLMMVKSGQAPVDEPRHDHGGQAKKSHRKKKKR >Mature_52_residues STPLIALAVILAVFAVVLIPLMMVKSGQAPVDEPRHDHGGQAKKSHRKKKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5800; Mature: 5669
Theoretical pI: Translated: 11.46; Mature: 11.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPLIALAVILAVFAVVLIPLMMVKSGQAPVDEPRHDHGGQAKKSHRKKKKR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure STPLIALAVILAVFAVVLIPLMMVKSGQAPVDEPRHDHGGQAKKSHRKKKKR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA