| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is murB-1 [H]
Identifier: 197116891
GI number: 197116891
Start: 595559
End: 596461
Strand: Direct
Name: murB-1 [H]
Synonym: Gbem_0493
Alternate gene names: 197116891
Gene position: 595559-596461 (Clockwise)
Preceding gene: 197116890
Following gene: 197116892
Centisome position: 12.9
GC content: 65.23
Gene sequence:
>903_bases TTGACACGGGGCGAGCTCGAACAAGCGGTCCAGGGGGTGCGCGGCACGGTCAAGTGGGACGAGCCGATGTGGCAGCACAC CTCCCTTAAAGTCGGGGGTCCGGCGGATCTTTACTTCGAGCCCGCCGATCTGCCCGACCTTCACGAGACCGTGGAGAAGC TCCTCGCCGCGAAGATCCCTTACCTGGTGCTGGGAGGGGGGTACAACCTGCTGGTGCGCGACGGCGGCATCAGAGGGTGC GTCATCTCGCTCAAGAAACTGGACACCCTGGAGATGCAGCCGGGCGCGAGACTCGAAGTGGGCGCGGGGGTAACCAACTC CACCCTCTGCCGCTTCGCCGCCGAGCATTGCCTTGGGGGGATGGAATTTCTCAGCGGCATTCCCGGAAGCTTCGGCGGAG CGCTCACCATGAACGCCGGCGCCCAGGGTGGCGAGACGCTGCAGCGGGTCGAGACGCTCATCACTTTGCGTGAGGGAAAG CTCTTGGTGCGCAAAGCCGCTGAGCTGGAATTCGGTTACCGCTACTTGAGGCTTTTGCCGGGAGAGATCGTCCTGGGGGC GAAGCTCAGGCTCGAACCTGCCGAACGCCGCATCATCGAGGAGCGGATGCAGGCCAACATCGCCAGAAGAAGCGGGACGC AGCGGGTCACCTATCCCAATGCCGGGTCCTTCTTCAAGAACCCGTCGGGGCGGCACGCCTGGGAGCTGATCGACCGGGCC GGCATGCGCGGCGTCACCGTCGGCGGTGCTCAGGTCTCAGAGGCGCACACCAACTTCCTGGTCAATCGCGGCGGCGCGTG TGCCGCGGACTTCACTTCGCTCGCGGCGCTGGTGAAGCTGAGGGTGAAGGAGACCAGCGGCGTCGACCTCGAGGAAGAGG TCCGCCTGGTAGGCGAAGAGTAG
Upstream 100 bases:
>100_bases TTGCTCCCGGCGACATCCTGCTGACCCTTGGGGCCGGCAACGTCTGGCAGGTGGGAGAGACCATGCTGCTGCGGTTGAAG GCCGCGAAGGAGAGCTGAGG
Downstream 100 bases:
>100_bases AAAATTAAGGTGAACTCTCCCCTCCCTTGACGGGAGGGGCAGGGGGTGGGTGAAGCCGCACGGTATGGGAATGATGGCAC CTTCCCCCACCCCCTAACCC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTRGELEQAVQGVRGTVKWDEPMWQHTSLKVGGPADLYFEPADLPDLHETVEKLLAAKIPYLVLGGGYNLLVRDGGIRGC VISLKKLDTLEMQPGARLEVGAGVTNSTLCRFAAEHCLGGMEFLSGIPGSFGGALTMNAGAQGGETLQRVETLITLREGK LLVRKAAELEFGYRYLRLLPGEIVLGAKLRLEPAERRIIEERMQANIARRSGTQRVTYPNAGSFFKNPSGRHAWELIDRA GMRGVTVGGAQVSEAHTNFLVNRGGACAADFTSLAALVKLRVKETSGVDLEEEVRLVGEE
Sequences:
>Translated_300_residues MTRGELEQAVQGVRGTVKWDEPMWQHTSLKVGGPADLYFEPADLPDLHETVEKLLAAKIPYLVLGGGYNLLVRDGGIRGC VISLKKLDTLEMQPGARLEVGAGVTNSTLCRFAAEHCLGGMEFLSGIPGSFGGALTMNAGAQGGETLQRVETLITLREGK LLVRKAAELEFGYRYLRLLPGEIVLGAKLRLEPAERRIIEERMQANIARRSGTQRVTYPNAGSFFKNPSGRHAWELIDRA GMRGVTVGGAQVSEAHTNFLVNRGGACAADFTSLAALVKLRVKETSGVDLEEEVRLVGEE >Mature_299_residues TRGELEQAVQGVRGTVKWDEPMWQHTSLKVGGPADLYFEPADLPDLHETVEKLLAAKIPYLVLGGGYNLLVRDGGIRGCV ISLKKLDTLEMQPGARLEVGAGVTNSTLCRFAAEHCLGGMEFLSGIPGSFGGALTMNAGAQGGETLQRVETLITLREGKL LVRKAAELEFGYRYLRLLPGEIVLGAKLRLEPAERRIIEERMQANIARRSGTQRVTYPNAGSFFKNPSGRHAWELIDRAG MRGVTVGGAQVSEAHTNFLVNRGGACAADFTSLAALVKLRVKETSGVDLEEEVRLVGEE
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 32516; Mature: 32385
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRGELEQAVQGVRGTVKWDEPMWQHTSLKVGGPADLYFEPADLPDLHETVEKLLAAKIP CCHHHHHHHHHHHCCCEECCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCC YLVLGGGYNLLVRDGGIRGCVISLKKLDTLEMQPGARLEVGAGVTNSTLCRFAAEHCLGG EEEECCCEEEEEECCCCCEEEEEEHHCCEEECCCCCEEEECCCCCHHHHHHHHHHHHCCH MEFLSGIPGSFGGALTMNAGAQGGETLQRVETLITLREGKLLVRKAAELEFGYRYLRLLP HHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCC GEIVLGAKLRLEPAERRIIEERMQANIARRSGTQRVTYPNAGSFFKNPSGRHAWELIDRA CCEEECCEEEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHC GMRGVTVGGAQVSEAHTNFLVNRGGACAADFTSLAALVKLRVKETSGVDLEEEVRLVGEE CCCEEEECCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC >Mature Secondary Structure TRGELEQAVQGVRGTVKWDEPMWQHTSLKVGGPADLYFEPADLPDLHETVEKLLAAKIP CHHHHHHHHHHHCCCEECCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCC YLVLGGGYNLLVRDGGIRGCVISLKKLDTLEMQPGARLEVGAGVTNSTLCRFAAEHCLGG EEEECCCEEEEEECCCCCEEEEEEHHCCEEECCCCCEEEECCCCCHHHHHHHHHHHHCCH MEFLSGIPGSFGGALTMNAGAQGGETLQRVETLITLREGKLLVRKAAELEFGYRYLRLLP HHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCC GEIVLGAKLRLEPAERRIIEERMQANIARRSGTQRVTYPNAGSFFKNPSGRHAWELIDRA CCEEECCEEEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHC GMRGVTVGGAQVSEAHTNFLVNRGGACAADFTSLAALVKLRVKETSGVDLEEEVRLVGEE CCCEEEECCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA