Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116879

Identifier: 197116879

GI number: 197116879

Start: 581792

End: 582133

Strand: Direct

Name: 197116879

Synonym: Gbem_0481

Alternate gene names: NA

Gene position: 581792-582133 (Clockwise)

Preceding gene: 197116878

Following gene: 308535167

Centisome position: 12.61

GC content: 59.36

Gene sequence:

>342_bases
ATGTCTACCGTAAACGACCTGGTGCTGGTCCACATCGACAACAAACCTTCTTTTTACGCGAGGATCGAGGACATTTCCCC
GGACGTGAAGCAGGGATGGTGGAAGGTGCAGCTTCTCGTACTCACCGTGCCCCTGCAGGTCTACACCTGGATCCTGGACG
AGAGCCAGGTGAACGGTTCCCCCTTCACCATGGCCGGCACCCCGATCATGCTGGAAAAAGTGGTCTCGCCGGAACCGCCC
CCCAGACCGCTCGCCTCGGTCGGCAAGGAAGGCAAGGGCGCAGGCAAGGATACTCCCCGCAAAGGGGGAAACGTCGTCTC
CCTCTTCGACAGGAAAAAGTGA

Upstream 100 bases:

>100_bases
TTGTTCCCCTGCGGGGCAATGGACGGCTCCCTGCTGAGGGATGCCGCCCCGTCCCCCATACTCCGCACCACTACCGCTTT
CTGACCGGAGGAAACAACTG

Downstream 100 bases:

>100_bases
CGCAAAAGAACTCAGCCATTCCCGGCGGAGGGTTCCCCCCTCCGCCTCCCTCTCCGACTGTCTCCTCAACCACCCGAACT
TCCAATTAGAAGAGCGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSTVNDLVLVHIDNKPSFYARIEDISPDVKQGWWKVQLLVLTVPLQVYTWILDESQVNGSPFTMAGTPIMLEKVVSPEPP
PRPLASVGKEGKGAGKDTPRKGGNVVSLFDRKK

Sequences:

>Translated_113_residues
MSTVNDLVLVHIDNKPSFYARIEDISPDVKQGWWKVQLLVLTVPLQVYTWILDESQVNGSPFTMAGTPIMLEKVVSPEPP
PRPLASVGKEGKGAGKDTPRKGGNVVSLFDRKK
>Mature_112_residues
STVNDLVLVHIDNKPSFYARIEDISPDVKQGWWKVQLLVLTVPLQVYTWILDESQVNGSPFTMAGTPIMLEKVVSPEPPP
RPLASVGKEGKGAGKDTPRKGGNVVSLFDRKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12457; Mature: 12325

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVNDLVLVHIDNKPSFYARIEDISPDVKQGWWKVQLLVLTVPLQVYTWILDESQVNGS
CCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEEEECHHHEEEEECCCCCCCC
PFTMAGTPIMLEKVVSPEPPPRPLASVGKEGKGAGKDTPRKGGNVVSLFDRKK
CEEEECCCCEEHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
STVNDLVLVHIDNKPSFYARIEDISPDVKQGWWKVQLLVLTVPLQVYTWILDESQVNGS
CCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEEEECHHHEEEEECCCCCCCC
PFTMAGTPIMLEKVVSPEPPPRPLASVGKEGKGAGKDTPRKGGNVVSLFDRKK
CEEEECCCCEEHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA