| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116878
Identifier: 197116878
GI number: 197116878
Start: 581239
End: 581775
Strand: Direct
Name: 197116878
Synonym: Gbem_0480
Alternate gene names: NA
Gene position: 581239-581775 (Clockwise)
Preceding gene: 197116877
Following gene: 197116879
Centisome position: 12.59
GC content: 64.06
Gene sequence:
>537_bases ATGAAGTGGGAGAGGGAATGGGGCAAGGCCGTATCCGCGGTGAACGCGGGTTTCCTCGCCCTGCCGCAGGAAAAGGCGCA CCGGCTGCATGAGCTCTCCCGCGCCATGGTCGCGCTCAAGGAAAGGATGCAGCACCTGGTGGCGCAGGTCGACGCCGCGG AACTTTGCGCCGGTTGTGGCGGGGCCTGCTGCGTCTGCGGCAAGTACCATTTCGCCGCGGTGGATCTCCTGGTCTACCTG GCGACGCAAGAGCCGCTTTTCACGCCCCGCTTCGACAACGGTCTCTGTCCTTACCTGGGGGAGCCGAACTGCCTGGTGCC GGCTGGCTACCGCCCTTTCAACTGCATCACATTCAATTGCGAGCTGATCGAGGACCGGTTGGCGCATAGCGAGGTCTCCC GCTTCTACCTGATGGAGCGCGAGTTGAGGGAACTCTACGCCGAGATCCGCTCGTTGTTCCCCTGCGGGGCAATGGACGGC TCCCTGCTGAGGGATGCCGCCCCGTCCCCCATACTCCGCACCACTACCGCTTTCTGA
Upstream 100 bases:
>100_bases ATGTTGACGATCAAGGAAACCAAGCCTCGCGAACATTGAACGTTGAACGTTGAACCCTTCAGGCGACAGCCTGAAGGGCT TTTTTTAAGGGTAGGTGCCG
Downstream 100 bases:
>100_bases CCGGAGGAAACAACTGATGTCTACCGTAAACGACCTGGTGCTGGTCCACATCGACAACAAACCTTCTTTTTACGCGAGGA TCGAGGACATTTCCCCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKWEREWGKAVSAVNAGFLALPQEKAHRLHELSRAMVALKERMQHLVAQVDAAELCAGCGGACCVCGKYHFAAVDLLVYL ATQEPLFTPRFDNGLCPYLGEPNCLVPAGYRPFNCITFNCELIEDRLAHSEVSRFYLMERELRELYAEIRSLFPCGAMDG SLLRDAAPSPILRTTTAF
Sequences:
>Translated_178_residues MKWEREWGKAVSAVNAGFLALPQEKAHRLHELSRAMVALKERMQHLVAQVDAAELCAGCGGACCVCGKYHFAAVDLLVYL ATQEPLFTPRFDNGLCPYLGEPNCLVPAGYRPFNCITFNCELIEDRLAHSEVSRFYLMERELRELYAEIRSLFPCGAMDG SLLRDAAPSPILRTTTAF >Mature_178_residues MKWEREWGKAVSAVNAGFLALPQEKAHRLHELSRAMVALKERMQHLVAQVDAAELCAGCGGACCVCGKYHFAAVDLLVYL ATQEPLFTPRFDNGLCPYLGEPNCLVPAGYRPFNCITFNCELIEDRLAHSEVSRFYLMERELRELYAEIRSLFPCGAMDG SLLRDAAPSPILRTTTAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19874; Mature: 19874
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWEREWGKAVSAVNAGFLALPQEKAHRLHELSRAMVALKERMQHLVAQVDAAELCAGCG CCCHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC GACCVCGKYHFAAVDLLVYLATQEPLFTPRFDNGLCPYLGEPNCLVPAGYRPFNCITFNC CHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEH ELIEDRLAHSEVSRFYLMERELRELYAEIRSLFPCGAMDGSLLRDAAPSPILRTTTAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHCCCCC >Mature Secondary Structure MKWEREWGKAVSAVNAGFLALPQEKAHRLHELSRAMVALKERMQHLVAQVDAAELCAGCG CCCHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC GACCVCGKYHFAAVDLLVYLATQEPLFTPRFDNGLCPYLGEPNCLVPAGYRPFNCITFNC CHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEH ELIEDRLAHSEVSRFYLMERELRELYAEIRSLFPCGAMDGSLLRDAAPSPILRTTTAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA