| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116771
Identifier: 197116771
GI number: 197116771
Start: 450266
End: 450562
Strand: Reverse
Name: 197116771
Synonym: Gbem_0373
Alternate gene names: NA
Gene position: 450562-450266 (Counterclockwise)
Preceding gene: 197116776
Following gene: 197116768
Centisome position: 9.76
GC content: 58.59
Gene sequence:
>297_bases ATGAAAGTTCTGGTGGATCTTTGCGTCGTTCCTCTTGGTGTCGGCGTCTCTGTTTCGAGTTACATCGCCGCATGCGAGAA GGTACTTACCGAGGCGGGGCTGAAGATTGCTTTGCATAGTTACGGGACCAACATTGAGGGGGAATGGGACGAGGTGTTCG CGGCCATCAAGCGGTGTCACGAGGTGGTGCACGGCATGGGGGCTCCGCGCATCACCACCACCATCAAGCTCGGGACCCGG ACCGACCGGAACCAGAGCATGGAGGACAAGATCAGGAGCGTCCGGGAGAAGCTGTGA
Upstream 100 bases:
>100_bases GATCGCGACAGTATCAGCTTTAACTTTATTTGATACTGCCTTTGGTCTATGATTGCCGCGGTGTTGTCATCCCAAATCTG TCGTGACAGGAGAAAAGAAG
Downstream 100 bases:
>100_bases CTTCGTCCTTGACGGAAAGCATCTCCACCTCGAACAGGACGTCGGTGCCTGCGGGAAGCGGCTCCCGGTAGTCCCGGTTG CCAGGGATGGAGTGGGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MKVLVDLCVVPLGVGVSVSSYIAACEKVLTEAGLKIALHSYGTNIEGEWDEVFAAIKRCHEVVHGMGAPRITTTIKLGTR TDRNQSMEDKIRSVREKL
Sequences:
>Translated_98_residues MKVLVDLCVVPLGVGVSVSSYIAACEKVLTEAGLKIALHSYGTNIEGEWDEVFAAIKRCHEVVHGMGAPRITTTIKLGTR TDRNQSMEDKIRSVREKL >Mature_98_residues MKVLVDLCVVPLGVGVSVSSYIAACEKVLTEAGLKIALHSYGTNIEGEWDEVFAAIKRCHEVVHGMGAPRITTTIKLGTR TDRNQSMEDKIRSVREKL
Specific function: Unknown
COG id: COG0011
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0045 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319472, Length=96, Percent_Identity=45.8333333333333, Blast_Score=88, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002767 - InterPro: IPR016198 [H]
Pfam domain/function: PF01910 DUF77 [H]
EC number: NA
Molecular weight: Translated: 10742; Mature: 10742
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLVDLCVVPLGVGVSVSSYIAACEKVLTEAGLKIALHSYGTNIEGEWDEVFAAIKRCH CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHEEHHCCCCCCCCCHHHHHHHHHHHH EVVHGMGAPRITTTIKLGTRTDRNQSMEDKIRSVREKL HHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKVLVDLCVVPLGVGVSVSSYIAACEKVLTEAGLKIALHSYGTNIEGEWDEVFAAIKRCH CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHEEHHCCCCCCCCCHHHHHHHHHHHH EVVHGMGAPRITTTIKLGTRTDRNQSMEDKIRSVREKL HHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]