Click here to switch to the map view.

The map label for this gene is 197116770

Identifier: 197116770

GI number: 197116770

Start: 449872

End: 450291

Strand: Direct

Name: 197116770

Synonym: Gbem_0372

Alternate gene names: NA

Gene position: 449872-450291 (Clockwise)

Preceding gene: 308535160

Following gene: 197116772

Centisome position: 9.75

GC content: 64.29

Gene sequence:

>420_bases
ATGGAAACGCAACCAGGCAAAAGGGTCAACATCAGGTACAAATGCAAACTGGATGACGGCAGGGTCTACCTCGTCGGCGA
GCGGAACACCCTGGAGTTCCTGGTCGGCTCCGGGCGCGTCCCGAAGTCGCTCGAGGCGGGGCTTTTAGGAATGCAGCAGG
GGGACCATCGCGTGGTACGCGTCCCCGCCGCGGAGGCGGAGCTCTTCCCCTTCCCCAAGGGATCGCATTTTGCCTTCAGC
ACCGGAGGGGCACCGGGAATCGCCTACGATTTCGGCCCCGGGGCGGGAGGGGACGTCTCCCACTCCATCCCTGGCAACCG
GGACTACCGGGAGCCGCTTCCCGCAGGCACCGACGTCCTGTTCGAGGTGGAGATGCTTTCCGTCAAGGACGAAGTCACAG
CTTCTCCCGGACGCTCCTGA

Upstream 100 bases:

>100_bases
GTTTGTCTTCGTGCCGGCCCCCCGGTAGCCGGAAACCCGCGGCAGTCCGCTCCCTACAGCCGGCCCACCAAGCCACCAGC
TCTCACACAGGCGGTGCCTC

Downstream 100 bases:

>100_bases
TCTTGTCCTCCATGCTCTGGTTCCGGTCGGTCCGGGTCCCGAGCTTGATGGTGGTGGTGATGCGCGGAGCCCCCATGCCG
TGCACCACCTCGTGACACCG

Product: FKBP-type peptidylprolyl cis-trans isomerase

Products: NA

Alternate protein names: FKBP-Type Peptidylprolyl Cis-Trans Isomerase

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
METQPGKRVNIRYKCKLDDGRVYLVGERNTLEFLVGSGRVPKSLEAGLLGMQQGDHRVVRVPAAEAELFPFPKGSHFAFS
TGGAPGIAYDFGPGAGGDVSHSIPGNRDYREPLPAGTDVLFEVEMLSVKDEVTASPGRS

Sequences:

>Translated_139_residues
METQPGKRVNIRYKCKLDDGRVYLVGERNTLEFLVGSGRVPKSLEAGLLGMQQGDHRVVRVPAAEAELFPFPKGSHFAFS
TGGAPGIAYDFGPGAGGDVSHSIPGNRDYREPLPAGTDVLFEVEMLSVKDEVTASPGRS
>Mature_139_residues
METQPGKRVNIRYKCKLDDGRVYLVGERNTLEFLVGSGRVPKSLEAGLLGMQQGDHRVVRVPAAEAELFPFPKGSHFAFS
TGGAPGIAYDFGPGAGGDVSHSIPGNRDYREPLPAGTDVLFEVEMLSVKDEVTASPGRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14904; Mature: 14904

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METQPGKRVNIRYKCKLDDGRVYLVGERNTLEFLVGSGRVPKSLEAGLLGMQQGDHRVVR
CCCCCCCEEEEEEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCEEECCCCCCEEEE
VPAAEAELFPFPKGSHFAFSTGGAPGIAYDFGPGAGGDVSHSIPGNRDYREPLPAGTDVL
ECCCCCEEECCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
FEVEMLSVKDEVTASPGRS
EEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
METQPGKRVNIRYKCKLDDGRVYLVGERNTLEFLVGSGRVPKSLEAGLLGMQQGDHRVVR
CCCCCCCEEEEEEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCEEECCCCCCEEEE
VPAAEAELFPFPKGSHFAFSTGGAPGIAYDFGPGAGGDVSHSIPGNRDYREPLPAGTDVL
ECCCCCEEECCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
FEVEMLSVKDEVTASPGRS
EEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA