| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is metX
Identifier: 197116749
GI number: 197116749
Start: 431140
End: 432243
Strand: Reverse
Name: metX
Synonym: Gbem_0349
Alternate gene names: 197116749
Gene position: 432243-431140 (Counterclockwise)
Preceding gene: 197116750
Following gene: 197116745
Centisome position: 9.37
GC content: 64.13
Gene sequence:
>1104_bases ATGTCCTACGGCATAGTGACAGAACAGATCGCCACCTTCGATACGGAACTGCGGCTGGAAAGCGGGCGTATCCTGGGGCC GATCGACATAGCCTACGAGACCTACGGCACCTTGAACGAGTCGCGCTCGAACGCCATCCTGGTGACCCATGCCTGGACCG GCAGCGCGCACTTGGCCGGTCGCTACAGCGAAGACGAGAAGCGCGCGGGCTGGTGGGACGAAATCGTCGGCCCCGGCGCC CTTTTGGACACCGACCGCTACTTCGTGATCTGCTCCAACGTGATCGGCTCCTGCTTCGGCTCCACCGGCCCCACCTCGAT CAACCCGAAGACCGGCAAGCGCTACAACCTGGCCTTCCCGGTGATCACGGTGCGCGACATGGTGAAGGCCCAGGCCCTGC TCATGGACCGGCTCGGAATCGGGAAGCTTTTCTGCGTGCTGGGGGGGAGCATGGGGGGGATGCAGGCCCTGGAGTGGGCG ACCCAGTTCCCGGAGCGGGTAGGCTCGGCCGTGGTGCTCGCCACGACGCCGCGCCCTTCGGCGCAGGCCATCTCGCTGAA CGCCGTGGCGCGCTGGGCCATCTTCAACGACCCTAACTGGAAAAAAGGGGAATACCGGAAGAACCCCAAGGACGGCCTGG CTTTAGCCCGCGGCATCGGGCACATCACCTTCCTCTCGGACGAATCGATGACGGCCAAGTTCGACCGCCGCTTCTCCGCC CGCGACGGGCAGTTCGACTTCTTCGGGCAGTTCGAGGTGGAACGCTACCTGACCTACAACGGCTACAACTTCGTGGACCG CTTCGACGCCAACTCCTTCCTCTACCTCGCCAAGGCGCTCGACCTCTACGACGTCGCCTCGGGGTGCGAATCGCTGGAGG AAGCCTTCGCGCCGGTTACCGCCCCGATCCAGTTCTTCGCCTTCACCTCGGACTGGCTCTACCCGCCGGCGCAGACCGAG GAGATGGTCGCATCACTCAAGACGCTGGGAAAACAGGTCGAGTACCACCTGATCACCTCGGCCTACGGCCACGACGCCTT CCTTTTGGAGCACCAGACCTTCACCCCGCTGGTCGAGTCCTTCCTGGACCGGGTCAAGGTCTAG
Upstream 100 bases:
>100_bases AAGGCGCTTTAGCTCCATCACCACAAAAGCCCCTTCTCTCATACCGAGACGGGGCTTTTTTAATACCTGCTGCATGCGGC GCATCATTTAAGAGAGAAAC
Downstream 100 bases:
>100_bases GCAGCACCCGCCTCGCGCACCGGCCACCCCATAATGGCGGCCACGTCTTCGTTGAGCATCATCTCCTCGCCGCTGGGAAG GGCAAACACCTTGACCTTGG
Product: homoserine O-acetyltransferase
Products: NA
Alternate protein names: Homoserine O-trans-acetylase; HTA; Homoserine transacetylase
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSYGIVTEQIATFDTELRLESGRILGPIDIAYETYGTLNESRSNAILVTHAWTGSAHLAGRYSEDEKRAGWWDEIVGPGA LLDTDRYFVICSNVIGSCFGSTGPTSINPKTGKRYNLAFPVITVRDMVKAQALLMDRLGIGKLFCVLGGSMGGMQALEWA TQFPERVGSAVVLATTPRPSAQAISLNAVARWAIFNDPNWKKGEYRKNPKDGLALARGIGHITFLSDESMTAKFDRRFSA RDGQFDFFGQFEVERYLTYNGYNFVDRFDANSFLYLAKALDLYDVASGCESLEEAFAPVTAPIQFFAFTSDWLYPPAQTE EMVASLKTLGKQVEYHLITSAYGHDAFLLEHQTFTPLVESFLDRVKV
Sequences:
>Translated_367_residues MSYGIVTEQIATFDTELRLESGRILGPIDIAYETYGTLNESRSNAILVTHAWTGSAHLAGRYSEDEKRAGWWDEIVGPGA LLDTDRYFVICSNVIGSCFGSTGPTSINPKTGKRYNLAFPVITVRDMVKAQALLMDRLGIGKLFCVLGGSMGGMQALEWA TQFPERVGSAVVLATTPRPSAQAISLNAVARWAIFNDPNWKKGEYRKNPKDGLALARGIGHITFLSDESMTAKFDRRFSA RDGQFDFFGQFEVERYLTYNGYNFVDRFDANSFLYLAKALDLYDVASGCESLEEAFAPVTAPIQFFAFTSDWLYPPAQTE EMVASLKTLGKQVEYHLITSAYGHDAFLLEHQTFTPLVESFLDRVKV >Mature_366_residues SYGIVTEQIATFDTELRLESGRILGPIDIAYETYGTLNESRSNAILVTHAWTGSAHLAGRYSEDEKRAGWWDEIVGPGAL LDTDRYFVICSNVIGSCFGSTGPTSINPKTGKRYNLAFPVITVRDMVKAQALLMDRLGIGKLFCVLGGSMGGMQALEWAT QFPERVGSAVVLATTPRPSAQAISLNAVARWAIFNDPNWKKGEYRKNPKDGLALARGIGHITFLSDESMTAKFDRRFSAR DGQFDFFGQFEVERYLTYNGYNFVDRFDANSFLYLAKALDLYDVASGCESLEEAFAPVTAPIQFFAFTSDWLYPPAQTEE MVASLKTLGKQVEYHLITSAYGHDAFLLEHQTFTPLVESFLDRVKV
Specific function: Unknown
COG id: COG2021
COG function: function code E; Homoserine acetyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. HTA family
Homologues:
Organism=Saccharomyces cerevisiae, GI6324052, Length=225, Percent_Identity=42.6666666666667, Blast_Score=177, Evalue=3e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): METX_GEOBB (B5EAS1)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002137176.1 - ProteinModelPortal: B5EAS1 - SMR: B5EAS1 - GeneID: 6783175 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_0349 - HOGENOM: HBG692920 - OMA: VSFTSDW - ProtClustDB: CLSK828845 - GO: GO:0005737 - HAMAP: MF_00296 - InterPro: IPR000073 - InterPro: IPR008220 - PIRSF: PIRSF000443 - TIGRFAMs: TIGR01392
Pfam domain/function: PF00561 Abhydrolase_1
EC number: =2.3.1.31
Molecular weight: Translated: 40820; Mature: 40688
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: ACT_SITE 150-150 ACT_SITE 344-344
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYGIVTEQIATFDTELRLESGRILGPIDIAYETYGTLNESRSNAILVTHAWTGSAHLAG CCCCCHHHHHHHCCCEEEECCCCEECCCEEHHHHHCCCCCCCCCEEEEEEECCCCCEECC RYSEDEKRAGWWDEIVGPGALLDTDRYFVICSNVIGSCFGSTGPTSINPKTGKRYNLAFP CCCCCHHCCCCHHHHCCCCCEEECCCEEEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEEC VITVRDMVKAQALLMDRLGIGKLFCVLGGSMGGMQALEWATQFPERVGSAVVLATTPRPS HHHHHHHHHHHHHHHHHCCHHHEEEHHCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCC AQAISLNAVARWAIFNDPNWKKGEYRKNPKDGLALARGIGHITFLSDESMTAKFDRRFSA CCEEEEEHEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHCCCC RDGQFDFFGQFEVERYLTYNGYNFVDRFDANSFLYLAKALDLYDVASGCESLEEAFAPVT CCCCEEEEEEEEEEEEEEECCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC APIQFFAFTSDWLYPPAQTEEMVASLKTLGKQVEYHLITSAYGHDAFLLEHQTFTPLVES CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCHHHHHHHH FLDRVKV HHHHHCC >Mature Secondary Structure SYGIVTEQIATFDTELRLESGRILGPIDIAYETYGTLNESRSNAILVTHAWTGSAHLAG CCCCHHHHHHHCCCEEEECCCCEECCCEEHHHHHCCCCCCCCCEEEEEEECCCCCEECC RYSEDEKRAGWWDEIVGPGALLDTDRYFVICSNVIGSCFGSTGPTSINPKTGKRYNLAFP CCCCCHHCCCCHHHHCCCCCEEECCCEEEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEEC VITVRDMVKAQALLMDRLGIGKLFCVLGGSMGGMQALEWATQFPERVGSAVVLATTPRPS HHHHHHHHHHHHHHHHHCCHHHEEEHHCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCC AQAISLNAVARWAIFNDPNWKKGEYRKNPKDGLALARGIGHITFLSDESMTAKFDRRFSA CCEEEEEHEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHCCCC RDGQFDFFGQFEVERYLTYNGYNFVDRFDANSFLYLAKALDLYDVASGCESLEEAFAPVT CCCCEEEEEEEEEEEEEEECCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC APIQFFAFTSDWLYPPAQTEEMVASLKTLGKQVEYHLITSAYGHDAFLLEHQTFTPLVES CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCHHHHHHHH FLDRVKV HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA