Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116746

Identifier: 197116746

GI number: 197116746

Start: 427759

End: 428691

Strand: Direct

Name: 197116746

Synonym: Gbem_0346

Alternate gene names: NA

Gene position: 427759-428691 (Clockwise)

Preceding gene: 197116738

Following gene: 197116747

Centisome position: 9.27

GC content: 59.91

Gene sequence:

>933_bases
ATGAAGCTCATCACGGAAGAGATGGTGGCACGCGCGTACTACTGGGTGAAGCCTCTGATGTCACGCAAGCTGCAGATTCT
CCTGCGCAGAGTGGTGGCAAGGCGCAAAAGGGCGTTGCACCGCTCCATCTGGCCCATCGATCCCGATGCAGGCGGCAAGC
CCGCGGGCTTTCCCGGCTGGCCCAATGGGAACCGTTTCTCCGTGGTCCTCACCCACGACGTCGATACGGCGCGCGGCCTC
GAGCGGTGCGAGGAGCTTATGGAGCTGGAAAAGGAGATGGGATTCCGCTCTTCGTTCAACTTCGTGGCCCACGATTACGT
GCTACCTCCGGAGCTGCGCAGGAAACTGGTGGAGCAGGGGTTCGAGGTGGGGGTGCACGGCCTGGAGCACAACAGGAAGC
TGTACGAGTCGCCTGACACCTTCGCCCGGCAGGCGGCGCTGATCAACGGGTACCTGAAGGAGTGGGGCGCAGTCGGCTTC
CGATCGCCCTGTGTCTACCATAACTTCGAATGGCTGCACCAACTTGACATCAGCTATGAGGCGTCCGCCTTCGACACTGA
CCCGTTCGAGCCGCAGTCCGACAGCCTGAGGACCATTTTCCCGGTGCACCAGACAGCGGTACCGGGGCGGGAATACGTCG
TGCTCCCCTATACCCTGCCGCAGGACTTCACCATGTTCATCCTGTTCAGGGAAAAGGGGATCGGAATCTGGAAAGAGAAG
CTGCGCTGGATCGCGGAGCACGGCGGCATGGCCCTCTTGATCACCCACCCCGATTACATGAACTTCGACGGCAACCGGCA
GTTCGACGAGTATCACTGTGAACTCTACCGGGAGCTTTTGGAGCACATAAGGACTGAGTACCAAGGTGAGTACTGTCATC
TCCTCCCTCATGAAATCGCCTCATTCTGGACCGAGCGTGTCGCCTTACGGTAA

Upstream 100 bases:

>100_bases
GTTCCGTTAATCCTGCGGCCTTGGCTGGCGGGCTTCGGGGCCGGCACGGGCGCCTCCTCTTTCTAATGGGAGAGTGGGAG
AGAGGTAAAAGGAGAGCCGC

Downstream 100 bases:

>100_bases
CCGGGCGGGCGCCCCTTATGCGCCAGCGCCTGTGGGCGACAGGGGCGGATCTGACCCGGTCCCCGGAGGTGGCGCATGAG
GCCCGTTTTGTGGTTGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKLITEEMVARAYYWVKPLMSRKLQILLRRVVARRKRALHRSIWPIDPDAGGKPAGFPGWPNGNRFSVVLTHDVDTARGL
ERCEELMELEKEMGFRSSFNFVAHDYVLPPELRRKLVEQGFEVGVHGLEHNRKLYESPDTFARQAALINGYLKEWGAVGF
RSPCVYHNFEWLHQLDISYEASAFDTDPFEPQSDSLRTIFPVHQTAVPGREYVVLPYTLPQDFTMFILFREKGIGIWKEK
LRWIAEHGGMALLITHPDYMNFDGNRQFDEYHCELYRELLEHIRTEYQGEYCHLLPHEIASFWTERVALR

Sequences:

>Translated_310_residues
MKLITEEMVARAYYWVKPLMSRKLQILLRRVVARRKRALHRSIWPIDPDAGGKPAGFPGWPNGNRFSVVLTHDVDTARGL
ERCEELMELEKEMGFRSSFNFVAHDYVLPPELRRKLVEQGFEVGVHGLEHNRKLYESPDTFARQAALINGYLKEWGAVGF
RSPCVYHNFEWLHQLDISYEASAFDTDPFEPQSDSLRTIFPVHQTAVPGREYVVLPYTLPQDFTMFILFREKGIGIWKEK
LRWIAEHGGMALLITHPDYMNFDGNRQFDEYHCELYRELLEHIRTEYQGEYCHLLPHEIASFWTERVALR
>Mature_310_residues
MKLITEEMVARAYYWVKPLMSRKLQILLRRVVARRKRALHRSIWPIDPDAGGKPAGFPGWPNGNRFSVVLTHDVDTARGL
ERCEELMELEKEMGFRSSFNFVAHDYVLPPELRRKLVEQGFEVGVHGLEHNRKLYESPDTFARQAALINGYLKEWGAVGF
RSPCVYHNFEWLHQLDISYEASAFDTDPFEPQSDSLRTIFPVHQTAVPGREYVVLPYTLPQDFTMFILFREKGIGIWKEK
LRWIAEHGGMALLITHPDYMNFDGNRQFDEYHCELYRELLEHIRTEYQGEYCHLLPHEIASFWTERVALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36431; Mature: 36431

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLITEEMVARAYYWVKPLMSRKLQILLRRVVARRKRALHRSIWPIDPDAGGKPAGFPGW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PNGNRFSVVLTHDVDTARGLERCEELMELEKEMGFRSSFNFVAHDYVLPPELRRKLVEQG
CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHCC
FEVGVHGLEHNRKLYESPDTFARQAALINGYLKEWGAVGFRSPCVYHNFEWLHQLDISYE
HHHCCCCHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHCCCCC
ASAFDTDPFEPQSDSLRTIFPVHQTAVPGREYVVLPYTLPQDFTMFILFREKGIGIWKEK
CCCCCCCCCCCCCCCCEEEECHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHH
LRWIAEHGGMALLITHPDYMNFDGNRQFDEYHCELYRELLEHIRTEYQGEYCHLLPHEIA
HHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHH
SFWTERVALR
HHHHHHHCCC
>Mature Secondary Structure
MKLITEEMVARAYYWVKPLMSRKLQILLRRVVARRKRALHRSIWPIDPDAGGKPAGFPGW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PNGNRFSVVLTHDVDTARGLERCEELMELEKEMGFRSSFNFVAHDYVLPPELRRKLVEQG
CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHCC
FEVGVHGLEHNRKLYESPDTFARQAALINGYLKEWGAVGFRSPCVYHNFEWLHQLDISYE
HHHCCCCHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHCCCCC
ASAFDTDPFEPQSDSLRTIFPVHQTAVPGREYVVLPYTLPQDFTMFILFREKGIGIWKEK
CCCCCCCCCCCCCCCCEEEECHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHH
LRWIAEHGGMALLITHPDYMNFDGNRQFDEYHCELYRELLEHIRTEYQGEYCHLLPHEIA
HHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHH
SFWTERVALR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA