| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197116733
Identifier: 197116733
GI number: 197116733
Start: 408559
End: 409578
Strand: Direct
Name: 197116733
Synonym: Gbem_0333
Alternate gene names: NA
Gene position: 408559-409578 (Clockwise)
Preceding gene: 197116729
Following gene: 197116734
Centisome position: 8.85
GC content: 63.63
Gene sequence:
>1020_bases ATGCGCGTCGGCATAATATCCCCCAACTACTTCGCCGAGGAAACCGGCAACGCCGTGACGGTGAGGCGCATCGAGCGGCA CCTGAGAGCGCTCGGGTGCGAGGTCAAGGTCTTCGCGACGGACCGCGTGGCGGGGGAACAACTGCAGGCGGCGGTCAAGG AATTCGCGCCCGACATCCTGCACGCCTTTCACGCCTACCACGGCGGCAGGGTGGCCTGCGCGCTAGCCAAGGCGCTGGGC GTTCCGTACCTGGTGACCTTCACCGGCACCGACATCTACAAGGCGCTCTGCGACCAGCGCAATATGGAACTGCATGGCGC CCTGAGGGGGGCGTCCCGGCTGGTCGCCTTCCATGGCTGCATACGCCACCGGCTGGCTGAACACATGCCGACCCTGGAGG AGCGGACCGCGATCATTCCCCAGGGGGTCGATCTTCCCGACGACTACAGCCCGCTTCCCCCAGCCGAGGAACAGGCCTTC ACCTTTTTGCTCCCCGCGGGGCTGCGCCCGGTGAAAAACGTGCTCTTCCCGCTTGAGCCTTTGGCTGCGCTTTATGCCGA TCATCCGCAGGTGCGCCTGCTCCTCGCCGGCCCCGTGCTCGACAAGGATTACGCCGCGCAGGTGATGGAGGCTTTGGAAC GCTACCCCTTCGCCAGGTATCTTGGCGTGGTGGGACACGACCGCATGGGCGACCTGTACCGCCGGGTCGACGTGGTCCTG AACAGCTCGCTAAGCGAAGGGGGGATGGCCAACACCGTCCTGGAGGCGATGGCCTACGCCAAGCCGCTTCTGGTTGCGGA CATAGAAGGAAACCGCTCCGTGGTCAAAGAGAACGTCACCGGTCTTTTGTATCGCGACGCCGGGGATCTCGTAGCCAAAG CCGGGAAGCTTGCGGCAAACGCCAGGTTGCGGGAGAAGCTTGGCAACAATGGCAGAGCACAGGTTCGGGACCACTACTCG CCCGACAAAGAAGCTGCCTCCTACCTCACTCTCTACCGCGACATACTGCAAAAAAACTGA
Upstream 100 bases:
>100_bases GGTTTATCCCTTGCCTTGCGCGGGTTTTGCGGCTATTATCACACGCTGGCCGGCCTCCCCTGGCGGTCGTTTTTGAGCGA AAATTCAAGCAGAGGTTCTC
Downstream 100 bases:
>100_bases TCCTCTCTCACTTCTCGCCTCCTTGTTCGCGTTCTGTCAGCCAACCAACTCCCGCCGTCTTTTAACACCGTCATAGCGAT AAGCCCCCTTTGAAGCAACG
Product: group glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Protein; Group Glycosyltransferase; Glycosyltransferase/Hydrolase; Glycosyl Transferase Group 1 Family Protein
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MRVGIISPNYFAEETGNAVTVRRIERHLRALGCEVKVFATDRVAGEQLQAAVKEFAPDILHAFHAYHGGRVACALAKALG VPYLVTFTGTDIYKALCDQRNMELHGALRGASRLVAFHGCIRHRLAEHMPTLEERTAIIPQGVDLPDDYSPLPPAEEQAF TFLLPAGLRPVKNVLFPLEPLAALYADHPQVRLLLAGPVLDKDYAAQVMEALERYPFARYLGVVGHDRMGDLYRRVDVVL NSSLSEGGMANTVLEAMAYAKPLLVADIEGNRSVVKENVTGLLYRDAGDLVAKAGKLAANARLREKLGNNGRAQVRDHYS PDKEAASYLTLYRDILQKN
Sequences:
>Translated_339_residues MRVGIISPNYFAEETGNAVTVRRIERHLRALGCEVKVFATDRVAGEQLQAAVKEFAPDILHAFHAYHGGRVACALAKALG VPYLVTFTGTDIYKALCDQRNMELHGALRGASRLVAFHGCIRHRLAEHMPTLEERTAIIPQGVDLPDDYSPLPPAEEQAF TFLLPAGLRPVKNVLFPLEPLAALYADHPQVRLLLAGPVLDKDYAAQVMEALERYPFARYLGVVGHDRMGDLYRRVDVVL NSSLSEGGMANTVLEAMAYAKPLLVADIEGNRSVVKENVTGLLYRDAGDLVAKAGKLAANARLREKLGNNGRAQVRDHYS PDKEAASYLTLYRDILQKN >Mature_339_residues MRVGIISPNYFAEETGNAVTVRRIERHLRALGCEVKVFATDRVAGEQLQAAVKEFAPDILHAFHAYHGGRVACALAKALG VPYLVTFTGTDIYKALCDQRNMELHGALRGASRLVAFHGCIRHRLAEHMPTLEERTAIIPQGVDLPDDYSPLPPAEEQAF TFLLPAGLRPVKNVLFPLEPLAALYADHPQVRLLLAGPVLDKDYAAQVMEALERYPFARYLGVVGHDRMGDLYRRVDVVL NSSLSEGGMANTVLEAMAYAKPLLVADIEGNRSVVKENVTGLLYRDAGDLVAKAGKLAANARLREKLGNNGRAQVRDHYS PDKEAASYLTLYRDILQKN
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21389559, Length=138, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37323; Mature: 37323
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGIISPNYFAEETGNAVTVRRIERHLRALGCEVKVFATDRVAGEQLQAAVKEFAPDIL CEEEECCCCCHHHHCCCEEHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH HAFHAYHGGRVACALAKALGVPYLVTFTGTDIYKALCDQRNMELHGALRGASRLVAFHGC HHHHHHCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IRHRLAEHMPTLEERTAIIPQGVDLPDDYSPLPPAEEQAFTFLLPAGLRPVKNVLFPLEP HHHHHHHHCCCHHHHCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCHHH LAALYADHPQVRLLLAGPVLDKDYAAQVMEALERYPFARYLGVVGHDRMGDLYRRVDVVL HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH NSSLSEGGMANTVLEAMAYAKPLLVADIEGNRSVVKENVTGLLYRDAGDLVAKAGKLAAN HCCCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHH ARLREKLGNNGRAQVRDHYSPDKEAASYLTLYRDILQKN HHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRVGIISPNYFAEETGNAVTVRRIERHLRALGCEVKVFATDRVAGEQLQAAVKEFAPDIL CEEEECCCCCHHHHCCCEEHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH HAFHAYHGGRVACALAKALGVPYLVTFTGTDIYKALCDQRNMELHGALRGASRLVAFHGC HHHHHHCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IRHRLAEHMPTLEERTAIIPQGVDLPDDYSPLPPAEEQAFTFLLPAGLRPVKNVLFPLEP HHHHHHHHCCCHHHHCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCHHH LAALYADHPQVRLLLAGPVLDKDYAAQVMEALERYPFARYLGVVGHDRMGDLYRRVDVVL HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH NSSLSEGGMANTVLEAMAYAKPLLVADIEGNRSVVKENVTGLLYRDAGDLVAKAGKLAAN HCCCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHH ARLREKLGNNGRAQVRDHYSPDKEAASYLTLYRDILQKN HHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA