| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104386
Identifier: 197104386
GI number: 197104386
Start: 1012555
End: 1013367
Strand: Direct
Name: 197104386
Synonym: PHZ_c0920
Alternate gene names: NA
Gene position: 1012555-1013367 (Clockwise)
Preceding gene: 197104385
Following gene: 197104387
Centisome position: 25.34
GC content: 74.91
Gene sequence:
>813_bases ATGCCCCGCATCCTGCCGCTGGTGGGCGTCGCCGCCGGCGGGGTTCTGGCGATCAACGCCCTGTCCGGCGCCAAGGACCT CCCGAGCCTCGTCTCGGGCGCCCGCGCGTTCGCCGAGGAGGCCGTGAAGGGCGCTCCGCCGGCCAAGGGCGGGAAGGCCG CCAAGGACGAGGCCGCCGACGCCGCGACAGGCGAGGCGAAGGACGCCGCCGCCCTGCCCGCGCCGGCCATCGCGCCCAAG CCGGTCTGCGCGCCTACCGCCGCCGAGCTCGCCAAGCAGGCCGGCCTGTCGCCCGCCGAGCTGCAGGTGCTGCAGAGCCT GGGCGAACGCCGGGGCGTGCTGGACCAGCGCGAGAACGACCTCAACACCCAGCTCGCCCTGATGGCCGCCGCCGAGGCCA AGCTGGACGCCAAGATCAAGGCGCTGAACGGCCTCAAGGGCGAGGTCCAGGGGCTGCTCACCGAGGCCGACAACAAGGAA GCCGCCGAGATCGACCGCCTGGTGAAGGTGTTCGAGGGCATGAAAGCCAAGGACGCCGCGCCGCGCTTCACCGCCCTCGA CGACTCGGTCCGGCTGCCGATCGCCGCCAAGATGAAGGAGCGGGCGCTCTCGGCGATCATCGCCCAGATGCCGGCCGCCG AGGCCAAGAAGCTGACCGAGGGCCTCGCCAAGCGCTTCACCGACGCCCAGGCCGCCGCGGCCAAGGCGCAGGCGCTTGCC CAGAACAGCGCCCAGCCGGCGGCTCCGCCCGCCAAGGCGGCGCCGGCGCCCCGCGCGCCCGCCGCCGCGACGCCGCCGCC GAAAGCCGGCTGA
Upstream 100 bases:
>100_bases CCCCCCGTCCTGCGGCCAGCCCCGCGGCGAATCTCGACGACGACCTCTTCGAGGACGCGCCGCTGACCCTGACCAGCTTC GGAGCCCGCCGGTGAAGTCC
Downstream 100 bases:
>100_bases CCCGATGAGCCTGCGCCGCGCCCTGCGTTCCGGCGTCGCCGCCGCCTGCATCGCAGGCGTGGCGGCGCCTGCGGGCGTGG CTGCGCCGGCGGCCACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MPRILPLVGVAAGGVLAINALSGAKDLPSLVSGARAFAEEAVKGAPPAKGGKAAKDEAADAATGEAKDAAALPAPAIAPK PVCAPTAAELAKQAGLSPAELQVLQSLGERRGVLDQRENDLNTQLALMAAAEAKLDAKIKALNGLKGEVQGLLTEADNKE AAEIDRLVKVFEGMKAKDAAPRFTALDDSVRLPIAAKMKERALSAIIAQMPAAEAKKLTEGLAKRFTDAQAAAAKAQALA QNSAQPAAPPAKAAPAPRAPAAATPPPKAG
Sequences:
>Translated_270_residues MPRILPLVGVAAGGVLAINALSGAKDLPSLVSGARAFAEEAVKGAPPAKGGKAAKDEAADAATGEAKDAAALPAPAIAPK PVCAPTAAELAKQAGLSPAELQVLQSLGERRGVLDQRENDLNTQLALMAAAEAKLDAKIKALNGLKGEVQGLLTEADNKE AAEIDRLVKVFEGMKAKDAAPRFTALDDSVRLPIAAKMKERALSAIIAQMPAAEAKKLTEGLAKRFTDAQAAAAKAQALA QNSAQPAAPPAKAAPAPRAPAAATPPPKAG >Mature_269_residues PRILPLVGVAAGGVLAINALSGAKDLPSLVSGARAFAEEAVKGAPPAKGGKAAKDEAADAATGEAKDAAALPAPAIAPKP VCAPTAAELAKQAGLSPAELQVLQSLGERRGVLDQRENDLNTQLALMAAAEAKLDAKIKALNGLKGEVQGLLTEADNKEA AEIDRLVKVFEGMKAKDAAPRFTALDDSVRLPIAAKMKERALSAIIAQMPAAEAKKLTEGLAKRFTDAQAAAAKAQALAQ NSAQPAAPPAKAAPAPRAPAAATPPPKAG
Specific function: Unknown
COG id: COG3334
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27164; Mature: 27032
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRILPLVGVAAGGVLAINALSGAKDLPSLVSGARAFAEEAVKGAPPAKGGKAAKDEAAD CCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH AATGEAKDAAALPAPAIAPKPVCAPTAAELAKQAGLSPAELQVLQSLGERRGVLDQREND HCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCH LNTQLALMAAAEAKLDAKIKALNGLKGEVQGLLTEADNKEAAEIDRLVKVFEGMKAKDAA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC PRFTALDDSVRLPIAAKMKERALSAIIAQMPAAEAKKLTEGLAKRFTDAQAAAAKAQALA CCCEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNSAQPAAPPAKAAPAPRAPAAATPPPKAG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRILPLVGVAAGGVLAINALSGAKDLPSLVSGARAFAEEAVKGAPPAKGGKAAKDEAAD CCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH AATGEAKDAAALPAPAIAPKPVCAPTAAELAKQAGLSPAELQVLQSLGERRGVLDQREND HCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCH LNTQLALMAAAEAKLDAKIKALNGLKGEVQGLLTEADNKEAAEIDRLVKVFEGMKAKDAA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC PRFTALDDSVRLPIAAKMKERALSAIIAQMPAAEAKKLTEGLAKRFTDAQAAAAKAQALA CCCEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNSAQPAAPPAKAAPAPRAPAAATPPPKAG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA