| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ftrB
Identifier: 197104170
GI number: 197104170
Start: 769521
End: 770288
Strand: Direct
Name: ftrB
Synonym: PHZ_c0704
Alternate gene names: NA
Gene position: 769521-770288 (Clockwise)
Preceding gene: 197104167
Following gene: 197104177
Centisome position: 19.26
GC content: 71.48
Gene sequence:
>768_bases ATGCCGATTCGCGAGGCGGACCTGGAACGTGTGCGGGCGCTGCCGTTGTTCGCCGGCTGCTCCCAGGACAGTTTCCGCCG CCTGACCGCCGGGGCCTTCCTCCAGCGCTTTCCCGCGGGCACCACCCTGCTGCTCGAGGGCGACCAGGTGGACTTCCTCT ATGTGCTCCTCGACGGCCTCGTCGAGCTGGAGGGCACATGGAACGACAAGGAGACCACCCTGGCCGTGCTCCGGCCGGTC TCCACCTTCATCCTGGCGGCGGTGGTGCTGGACGCCGATGCGCTGATGAGCGCGCGGACGCTGGAGCGGTCCGACATCCT CATGCTGTCGGGCGAGGCCTTGCGGCGCGGGATGCGGGAGGATCCGGTGTTCGGCCTCGCCGTCGCCCAGGAACTGTCCG GCTGCTACCGCGGCCTCGTGCGCGCGCTGAAGAACCAGAAGCTGCGGGGCGGGCTGGAGCGGCTCGCCAACTACCTGATC ACCCAGCGCCTGCGCCAGGGCGGGGAGCCGACCTTCACCCTGCCGCACGAGAAGCGGGTGCTGGCCTCGCTCCTGGGCAT GACGCCCGAGAACCTGTCGCGCGCCTTCGCCGCCCTCGGCGACTACGGGGTGGAGGTGCAGGGGGCCCAGGTCACCATCG GCCGCCCCGTGGTGCTGGAGCGTCTGGCCAAGCCCAACCCCCTGATCGACAACCACCAGCCCGTCACGCCCGGCCCTACC GGCAAGGCGCAGCGCGAGCGCTGGCCGGCCCCCGAACGCGCCGCCTAA
Upstream 100 bases:
>100_bases GTCAGGCGGAAGATCCGCGGCCCGCGGAGATTGACGCAAGTCAAGGCAAGCTCCGCGGCCCTCGGGCAGAAGCGCAGCGA CCGACAGCCGGGAGTGCGGG
Downstream 100 bases:
>100_bases GAGGCGATCGCGCCGGGGTCCTTGAGCGGGTCGTCGATCAGAAGAACCTGAACGTGCCCTCGATCGCGATGGAGCGGTAC TCGTCCATCCAGTTGATCGA
Product: transcriptional activator FtrB
Products: NA
Alternate protein names: Transcriptional Regulator Crp/Fnr Family; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Regulator Of Biofilm Formation Fnr Family; Transcriptional Regulator; CRP/FNR-Like Transcriptional Regulator; CRP Family Transcriptional Regulator; Transcriptional Activator; DnrE Protein; FNR-Like Transcriptional Regulator; Transcriptional Regulator Protein Fnr/CRP Family
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MPIREADLERVRALPLFAGCSQDSFRRLTAGAFLQRFPAGTTLLLEGDQVDFLYVLLDGLVELEGTWNDKETTLAVLRPV STFILAAVVLDADALMSARTLERSDILMLSGEALRRGMREDPVFGLAVAQELSGCYRGLVRALKNQKLRGGLERLANYLI TQRLRQGGEPTFTLPHEKRVLASLLGMTPENLSRAFAALGDYGVEVQGAQVTIGRPVVLERLAKPNPLIDNHQPVTPGPT GKAQRERWPAPERAA
Sequences:
>Translated_255_residues MPIREADLERVRALPLFAGCSQDSFRRLTAGAFLQRFPAGTTLLLEGDQVDFLYVLLDGLVELEGTWNDKETTLAVLRPV STFILAAVVLDADALMSARTLERSDILMLSGEALRRGMREDPVFGLAVAQELSGCYRGLVRALKNQKLRGGLERLANYLI TQRLRQGGEPTFTLPHEKRVLASLLGMTPENLSRAFAALGDYGVEVQGAQVTIGRPVVLERLAKPNPLIDNHQPVTPGPT GKAQRERWPAPERAA >Mature_254_residues PIREADLERVRALPLFAGCSQDSFRRLTAGAFLQRFPAGTTLLLEGDQVDFLYVLLDGLVELEGTWNDKETTLAVLRPVS TFILAAVVLDADALMSARTLERSDILMLSGEALRRGMREDPVFGLAVAQELSGCYRGLVRALKNQKLRGGLERLANYLIT QRLRQGGEPTFTLPHEKRVLASLLGMTPENLSRAFAALGDYGVEVQGAQVTIGRPVVLERLAKPNPLIDNHQPVTPGPTG KAQRERWPAPERAA
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27996; Mature: 27865
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIREADLERVRALPLFAGCSQDSFRRLTAGAFLQRFPAGTTLLLEGDQVDFLYVLLDGL CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH VELEGTWNDKETTLAVLRPVSTFILAAVVLDADALMSARTLERSDILMLSGEALRRGMRE HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCC DPVFGLAVAQELSGCYRGLVRALKNQKLRGGLERLANYLITQRLRQGGEPTFTLPHEKRV CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHH LASLLGMTPENLSRAFAALGDYGVEVQGAQVTIGRPVVLERLAKPNPLIDNHQPVTPGPT HHHHHCCCHHHHHHHHHHHHCCCCEEECCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCC GKAQRERWPAPERAA CCCHHHCCCCCCCCC >Mature Secondary Structure PIREADLERVRALPLFAGCSQDSFRRLTAGAFLQRFPAGTTLLLEGDQVDFLYVLLDGL CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH VELEGTWNDKETTLAVLRPVSTFILAAVVLDADALMSARTLERSDILMLSGEALRRGMRE HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCC DPVFGLAVAQELSGCYRGLVRALKNQKLRGGLERLANYLITQRLRQGGEPTFTLPHEKRV CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHH LASLLGMTPENLSRAFAALGDYGVEVQGAQVTIGRPVVLERLAKPNPLIDNHQPVTPGPT HHHHHCCCHHHHHHHHHHHHCCCCEEECCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCC GKAQRERWPAPERAA CCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA