Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197104141

Identifier: 197104141

GI number: 197104141

Start: 733144

End: 734493

Strand: Direct

Name: 197104141

Synonym: PHZ_c0675

Alternate gene names: NA

Gene position: 733144-734493 (Clockwise)

Preceding gene: 197104139

Following gene: 197104142

Centisome position: 18.35

GC content: 76.96

Gene sequence:

>1350_bases
ATGACCGACGCAACCCAAGCCCCCGGCGGCGTGCGCCGCGCCTATCCCTCGCGCCGCGACCTCGTGGCCGGCTCCGGAAC
CCTGGGCCTTGCGGCGGCGACGCCGGCGGGCGCCGCGATCGGAAGGGCCGACGAGTCGCTGGACTCCGCCTGGCTGCAGG
CGGTGCTGGAGCGCTATGCGGCTTTCGAGGGCAAGGCGTCGGGCGGACCGGGGGACGAGGCCTGCGGCGCCTGGCTGGAG
GGCGAACTCCGGCGCGCCGGCTACGCCTGCCGGCGGCAGGTCTTCGACGCGCCGTTCCTGGACCTGCGCGCGGCCAACCT
GGCGGCGGGCGCTGCGAGCGCCGGACTGACGGCCAATCCCCTGGCGCCGGTGACGGGGCCCGGCGGCGTTTCCGGCCCGC
TGCGGCTGGCGTCCGTTCCGGGCGACCTTCAGGGGGCCATCGCCCTGGTCGTCCTGCCGCACAAGCGATGGGTGACGCTG
GTCGATCCCATGGCCGCCCGCCCGCTGGAGGACGCCCTGGCCCGCGGCGCGGCCGCGGCGGTCCTGGTGACGACGGGACC
CACGGGCGAGGCCATCGCGCTCAACGTCAGCCCGCACCGGCCGGCGCCGGCGCGGCCGGTGGCGATCCTGGCCCCCAAGG
ATGCGGGCCCGTTCCTGGCGGCCGCCGCCGAAGGCCGACCCGCGACGCTGACCCTCGACGGGACCGCAGGCCGGCGGCCG
GCCTACAACCTGATCGCCCGGCTGGACCGCGGCGCGGCCCGGACCCTCGTCGTCTCGACGCCAAGGTCCGGCTGGTTCGA
CTGCGCCGCCGAGCGGGGCTCGGGACTGGCGGTCTGGCTGTCGCTGGCCCGCTGGCTGGCCCAGGCGGACCTCGGCGTGG
ACGTCGAATTGGCGGCCAACAGCGGCCACGAGTTCGAATACCTCGGCGGCGAGCACTACCTGGAAGAGGCCGCGCCGCCG
CCCGAGCGTACGGCCATGTGGGTGCATGTGGGCGCCAGCACGGCGGCGCGCGACTGGCACGCCTTCGGCCCGCTGCGACC
GCTGCCCAGCGCCGACCCGCAGCGCGTCCTGACCGCGACGGCGGACATCATCGACCGCGTGCGCCCGGCCTTCGCCGGCC
TCGCGGGCCTGGAGGCGGTGCTCGAGGCCACGGCCCTGACCGCAGGGGGCGAGATGACCAACGTGCTGAAGGCCGGCTAC
CGGACGGCCATCGGCCAGTACGGCGTCCACCGCTACTTCCACACCGCCGCCGACGACCTGCGCTGCACCTCGGGCGAGCT
GGTCCGGCCGGCGGCCCAGGCGTTCCGCGCGGCCATCGCCGCCGCCCTCGGCCGCCCCGCCGCCGGCTAG

Upstream 100 bases:

>100_bases
GCAGGCTCCCCCCGTACGGCCCGCAACGGTTCGGCGGGCGTGACAATCCTAACTCTCCGGCGAATGAATACCGTTCCCCC
GACCTGACCGCGACTGGAAG

Downstream 100 bases:

>100_bases
GAGACCGCGCCTTCACGGCCCCGCTTCACCCCTCCGAGGATATTCGCTAACGTGTGAGTGAAGAATCTTTCGGGGGAGGT
TTCCGATGTCGCTTGAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MTDATQAPGGVRRAYPSRRDLVAGSGTLGLAAATPAGAAIGRADESLDSAWLQAVLERYAAFEGKASGGPGDEACGAWLE
GELRRAGYACRRQVFDAPFLDLRAANLAAGAASAGLTANPLAPVTGPGGVSGPLRLASVPGDLQGAIALVVLPHKRWVTL
VDPMAARPLEDALARGAAAAVLVTTGPTGEAIALNVSPHRPAPARPVAILAPKDAGPFLAAAAEGRPATLTLDGTAGRRP
AYNLIARLDRGAARTLVVSTPRSGWFDCAAERGSGLAVWLSLARWLAQADLGVDVELAANSGHEFEYLGGEHYLEEAAPP
PERTAMWVHVGASTAARDWHAFGPLRPLPSADPQRVLTATADIIDRVRPAFAGLAGLEAVLEATALTAGGEMTNVLKAGY
RTAIGQYGVHRYFHTAADDLRCTSGELVRPAAQAFRAAIAAALGRPAAG

Sequences:

>Translated_449_residues
MTDATQAPGGVRRAYPSRRDLVAGSGTLGLAAATPAGAAIGRADESLDSAWLQAVLERYAAFEGKASGGPGDEACGAWLE
GELRRAGYACRRQVFDAPFLDLRAANLAAGAASAGLTANPLAPVTGPGGVSGPLRLASVPGDLQGAIALVVLPHKRWVTL
VDPMAARPLEDALARGAAAAVLVTTGPTGEAIALNVSPHRPAPARPVAILAPKDAGPFLAAAAEGRPATLTLDGTAGRRP
AYNLIARLDRGAARTLVVSTPRSGWFDCAAERGSGLAVWLSLARWLAQADLGVDVELAANSGHEFEYLGGEHYLEEAAPP
PERTAMWVHVGASTAARDWHAFGPLRPLPSADPQRVLTATADIIDRVRPAFAGLAGLEAVLEATALTAGGEMTNVLKAGY
RTAIGQYGVHRYFHTAADDLRCTSGELVRPAAQAFRAAIAAALGRPAAG
>Mature_448_residues
TDATQAPGGVRRAYPSRRDLVAGSGTLGLAAATPAGAAIGRADESLDSAWLQAVLERYAAFEGKASGGPGDEACGAWLEG
ELRRAGYACRRQVFDAPFLDLRAANLAAGAASAGLTANPLAPVTGPGGVSGPLRLASVPGDLQGAIALVVLPHKRWVTLV
DPMAARPLEDALARGAAAAVLVTTGPTGEAIALNVSPHRPAPARPVAILAPKDAGPFLAAAAEGRPATLTLDGTAGRRPA
YNLIARLDRGAARTLVVSTPRSGWFDCAAERGSGLAVWLSLARWLAQADLGVDVELAANSGHEFEYLGGEHYLEEAAPPP
ERTAMWVHVGASTAARDWHAFGPLRPLPSADPQRVLTATADIIDRVRPAFAGLAGLEAVLEATALTAGGEMTNVLKAGYR
TAIGQYGVHRYFHTAADDLRCTSGELVRPAAQAFRAAIAAALGRPAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46126; Mature: 45994

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDATQAPGGVRRAYPSRRDLVAGSGTLGLAAATPAGAAIGRADESLDSAWLQAVLERYA
CCCCCCCCCCHHHCCCCCCCEEECCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHH
AFEGKASGGPGDEACGAWLEGELRRAGYACRRQVFDAPFLDLRAANLAAGAASAGLTANP
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCC
LAPVTGPGGVSGPLRLASVPGDLQGAIALVVLPHKRWVTLVDPMAARPLEDALARGAAAA
CCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCEEEEECCHHCCCHHHHHHCCCEEE
VLVTTGPTGEAIALNVSPHRPAPARPVAILAPKDAGPFLAAAAEGRPATLTLDGTAGRRP
EEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCH
AYNLIARLDRGAARTLVVSTPRSGWFDCAAERGSGLAVWLSLARWLAQADLGVDVELAAN
HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECC
SGHEFEYLGGEHYLEEAAPPPERTAMWVHVGASTAARDWHAFGPLRPLPSADPQRVLTAT
CCCCEEECCCHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHH
ADIIDRVRPAFAGLAGLEAVLEATALTAGGEMTNVLKAGYRTAIGQYGVHRYFHTAADDL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RCTSGELVRPAAQAFRAAIAAALGRPAAG
CCCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDATQAPGGVRRAYPSRRDLVAGSGTLGLAAATPAGAAIGRADESLDSAWLQAVLERYA
CCCCCCCCCHHHCCCCCCCEEECCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHH
AFEGKASGGPGDEACGAWLEGELRRAGYACRRQVFDAPFLDLRAANLAAGAASAGLTANP
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCC
LAPVTGPGGVSGPLRLASVPGDLQGAIALVVLPHKRWVTLVDPMAARPLEDALARGAAAA
CCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCEEEEECCHHCCCHHHHHHCCCEEE
VLVTTGPTGEAIALNVSPHRPAPARPVAILAPKDAGPFLAAAAEGRPATLTLDGTAGRRP
EEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCH
AYNLIARLDRGAARTLVVSTPRSGWFDCAAERGSGLAVWLSLARWLAQADLGVDVELAAN
HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECC
SGHEFEYLGGEHYLEEAAPPPERTAMWVHVGASTAARDWHAFGPLRPLPSADPQRVLTAT
CCCCEEECCCHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHH
ADIIDRVRPAFAGLAGLEAVLEATALTAGGEMTNVLKAGYRTAIGQYGVHRYFHTAADDL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RCTSGELVRPAAQAFRAAIAAALGRPAAG
CCCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA