| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104141
Identifier: 197104141
GI number: 197104141
Start: 733144
End: 734493
Strand: Direct
Name: 197104141
Synonym: PHZ_c0675
Alternate gene names: NA
Gene position: 733144-734493 (Clockwise)
Preceding gene: 197104139
Following gene: 197104142
Centisome position: 18.35
GC content: 76.96
Gene sequence:
>1350_bases ATGACCGACGCAACCCAAGCCCCCGGCGGCGTGCGCCGCGCCTATCCCTCGCGCCGCGACCTCGTGGCCGGCTCCGGAAC CCTGGGCCTTGCGGCGGCGACGCCGGCGGGCGCCGCGATCGGAAGGGCCGACGAGTCGCTGGACTCCGCCTGGCTGCAGG CGGTGCTGGAGCGCTATGCGGCTTTCGAGGGCAAGGCGTCGGGCGGACCGGGGGACGAGGCCTGCGGCGCCTGGCTGGAG GGCGAACTCCGGCGCGCCGGCTACGCCTGCCGGCGGCAGGTCTTCGACGCGCCGTTCCTGGACCTGCGCGCGGCCAACCT GGCGGCGGGCGCTGCGAGCGCCGGACTGACGGCCAATCCCCTGGCGCCGGTGACGGGGCCCGGCGGCGTTTCCGGCCCGC TGCGGCTGGCGTCCGTTCCGGGCGACCTTCAGGGGGCCATCGCCCTGGTCGTCCTGCCGCACAAGCGATGGGTGACGCTG GTCGATCCCATGGCCGCCCGCCCGCTGGAGGACGCCCTGGCCCGCGGCGCGGCCGCGGCGGTCCTGGTGACGACGGGACC CACGGGCGAGGCCATCGCGCTCAACGTCAGCCCGCACCGGCCGGCGCCGGCGCGGCCGGTGGCGATCCTGGCCCCCAAGG ATGCGGGCCCGTTCCTGGCGGCCGCCGCCGAAGGCCGACCCGCGACGCTGACCCTCGACGGGACCGCAGGCCGGCGGCCG GCCTACAACCTGATCGCCCGGCTGGACCGCGGCGCGGCCCGGACCCTCGTCGTCTCGACGCCAAGGTCCGGCTGGTTCGA CTGCGCCGCCGAGCGGGGCTCGGGACTGGCGGTCTGGCTGTCGCTGGCCCGCTGGCTGGCCCAGGCGGACCTCGGCGTGG ACGTCGAATTGGCGGCCAACAGCGGCCACGAGTTCGAATACCTCGGCGGCGAGCACTACCTGGAAGAGGCCGCGCCGCCG CCCGAGCGTACGGCCATGTGGGTGCATGTGGGCGCCAGCACGGCGGCGCGCGACTGGCACGCCTTCGGCCCGCTGCGACC GCTGCCCAGCGCCGACCCGCAGCGCGTCCTGACCGCGACGGCGGACATCATCGACCGCGTGCGCCCGGCCTTCGCCGGCC TCGCGGGCCTGGAGGCGGTGCTCGAGGCCACGGCCCTGACCGCAGGGGGCGAGATGACCAACGTGCTGAAGGCCGGCTAC CGGACGGCCATCGGCCAGTACGGCGTCCACCGCTACTTCCACACCGCCGCCGACGACCTGCGCTGCACCTCGGGCGAGCT GGTCCGGCCGGCGGCCCAGGCGTTCCGCGCGGCCATCGCCGCCGCCCTCGGCCGCCCCGCCGCCGGCTAG
Upstream 100 bases:
>100_bases GCAGGCTCCCCCCGTACGGCCCGCAACGGTTCGGCGGGCGTGACAATCCTAACTCTCCGGCGAATGAATACCGTTCCCCC GACCTGACCGCGACTGGAAG
Downstream 100 bases:
>100_bases GAGACCGCGCCTTCACGGCCCCGCTTCACCCCTCCGAGGATATTCGCTAACGTGTGAGTGAAGAATCTTTCGGGGGAGGT TTCCGATGTCGCTTGAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MTDATQAPGGVRRAYPSRRDLVAGSGTLGLAAATPAGAAIGRADESLDSAWLQAVLERYAAFEGKASGGPGDEACGAWLE GELRRAGYACRRQVFDAPFLDLRAANLAAGAASAGLTANPLAPVTGPGGVSGPLRLASVPGDLQGAIALVVLPHKRWVTL VDPMAARPLEDALARGAAAAVLVTTGPTGEAIALNVSPHRPAPARPVAILAPKDAGPFLAAAAEGRPATLTLDGTAGRRP AYNLIARLDRGAARTLVVSTPRSGWFDCAAERGSGLAVWLSLARWLAQADLGVDVELAANSGHEFEYLGGEHYLEEAAPP PERTAMWVHVGASTAARDWHAFGPLRPLPSADPQRVLTATADIIDRVRPAFAGLAGLEAVLEATALTAGGEMTNVLKAGY RTAIGQYGVHRYFHTAADDLRCTSGELVRPAAQAFRAAIAAALGRPAAG
Sequences:
>Translated_449_residues MTDATQAPGGVRRAYPSRRDLVAGSGTLGLAAATPAGAAIGRADESLDSAWLQAVLERYAAFEGKASGGPGDEACGAWLE GELRRAGYACRRQVFDAPFLDLRAANLAAGAASAGLTANPLAPVTGPGGVSGPLRLASVPGDLQGAIALVVLPHKRWVTL VDPMAARPLEDALARGAAAAVLVTTGPTGEAIALNVSPHRPAPARPVAILAPKDAGPFLAAAAEGRPATLTLDGTAGRRP AYNLIARLDRGAARTLVVSTPRSGWFDCAAERGSGLAVWLSLARWLAQADLGVDVELAANSGHEFEYLGGEHYLEEAAPP PERTAMWVHVGASTAARDWHAFGPLRPLPSADPQRVLTATADIIDRVRPAFAGLAGLEAVLEATALTAGGEMTNVLKAGY RTAIGQYGVHRYFHTAADDLRCTSGELVRPAAQAFRAAIAAALGRPAAG >Mature_448_residues TDATQAPGGVRRAYPSRRDLVAGSGTLGLAAATPAGAAIGRADESLDSAWLQAVLERYAAFEGKASGGPGDEACGAWLEG ELRRAGYACRRQVFDAPFLDLRAANLAAGAASAGLTANPLAPVTGPGGVSGPLRLASVPGDLQGAIALVVLPHKRWVTLV DPMAARPLEDALARGAAAAVLVTTGPTGEAIALNVSPHRPAPARPVAILAPKDAGPFLAAAAEGRPATLTLDGTAGRRPA YNLIARLDRGAARTLVVSTPRSGWFDCAAERGSGLAVWLSLARWLAQADLGVDVELAANSGHEFEYLGGEHYLEEAAPPP ERTAMWVHVGASTAARDWHAFGPLRPLPSADPQRVLTATADIIDRVRPAFAGLAGLEAVLEATALTAGGEMTNVLKAGYR TAIGQYGVHRYFHTAADDLRCTSGELVRPAAQAFRAAIAAALGRPAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46126; Mature: 45994
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDATQAPGGVRRAYPSRRDLVAGSGTLGLAAATPAGAAIGRADESLDSAWLQAVLERYA CCCCCCCCCCHHHCCCCCCCEEECCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHH AFEGKASGGPGDEACGAWLEGELRRAGYACRRQVFDAPFLDLRAANLAAGAASAGLTANP HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCC LAPVTGPGGVSGPLRLASVPGDLQGAIALVVLPHKRWVTLVDPMAARPLEDALARGAAAA CCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCEEEEECCHHCCCHHHHHHCCCEEE VLVTTGPTGEAIALNVSPHRPAPARPVAILAPKDAGPFLAAAAEGRPATLTLDGTAGRRP EEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCH AYNLIARLDRGAARTLVVSTPRSGWFDCAAERGSGLAVWLSLARWLAQADLGVDVELAAN HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECC SGHEFEYLGGEHYLEEAAPPPERTAMWVHVGASTAARDWHAFGPLRPLPSADPQRVLTAT CCCCEEECCCHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHH ADIIDRVRPAFAGLAGLEAVLEATALTAGGEMTNVLKAGYRTAIGQYGVHRYFHTAADDL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RCTSGELVRPAAQAFRAAIAAALGRPAAG CCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TDATQAPGGVRRAYPSRRDLVAGSGTLGLAAATPAGAAIGRADESLDSAWLQAVLERYA CCCCCCCCCHHHCCCCCCCEEECCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHH AFEGKASGGPGDEACGAWLEGELRRAGYACRRQVFDAPFLDLRAANLAAGAASAGLTANP HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCC LAPVTGPGGVSGPLRLASVPGDLQGAIALVVLPHKRWVTLVDPMAARPLEDALARGAAAA CCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCEEEEECCHHCCCHHHHHHCCCEEE VLVTTGPTGEAIALNVSPHRPAPARPVAILAPKDAGPFLAAAAEGRPATLTLDGTAGRRP EEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCH AYNLIARLDRGAARTLVVSTPRSGWFDCAAERGSGLAVWLSLARWLAQADLGVDVELAAN HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECC SGHEFEYLGGEHYLEEAAPPPERTAMWVHVGASTAARDWHAFGPLRPLPSADPQRVLTAT CCCCEEECCCHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHH ADIIDRVRPAFAGLAGLEAVLEATALTAGGEMTNVLKAGYRTAIGQYGVHRYFHTAADDL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RCTSGELVRPAAQAFRAAIAAALGRPAAG CCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA