| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is xcsG [H]
Identifier: 197104123
GI number: 197104123
Start: 710561
End: 711025
Strand: Direct
Name: xcsG [H]
Synonym: PHZ_c0657
Alternate gene names: 197104123
Gene position: 710561-711025 (Clockwise)
Preceding gene: 197104122
Following gene: 197104124
Centisome position: 17.78
GC content: 71.83
Gene sequence:
>465_bases ATGACCGACTCCGTCCAGGACCAGACCCGCCCGCGCCCGCGCCGCCGCCGCGCCGAGGCCGGCTTCACCCTCGTCGAGGT GATGGTGGTGATCGTCATCATCGGCCTGCTGGCCACGGTGGTGATGATCAACGTCCTGCCCAGCCAGGACCGGGCCATGA AGGAGAAGGCCCGCGCCGACGTGGCCGTGCTGGAGCAGGCGGTGGAGACCTTCCGGCTGGAGAACCTCTCGTTCCCGACG AGCGAGCAGGGCCTGCAGGCGCTGGTCAGCCCGCCGCCGGGCCTGTCGCGTCCGGACCGCTACCGCGACGGCGGCTACGT GCGCCGCCTGCCGCAGGACCCCTGGGGCAACCCCTACCAGTACCGCTATCCCGGCGAGCACGGACGCTTCGACGTCTGGT CGTTCGGGGCCGACGGCCGACAGGGCGGCGAGGGCGATGACGCCGACATCGGCAACTGGAGCTAG
Upstream 100 bases:
>100_bases TCATCATCGTCATGGGCCTGATCGTGACCGTGATCGTGCTCTCGATCCTCCTGCCCATCCTGCAGATCAACACCCTCGCC TACCGCTGAAGAGACCCGCG
Downstream 100 bases:
>100_bases GCGGCCAGGCCACCTCCGGGCCGAGCGCGGCTTCTCGCTGGTCGAGATGATGGTCGCGCTGGCGGTCCTGGGGCTGCTCA CGGGGGCGATCCTGATGACC
Product: type II secretion system protein G
Products: NA
Alternate protein names: Cholera toxin secretion protein epsG [H]
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTDSVQDQTRPRPRRRRAEAGFTLVEVMVVIVIIGLLATVVMINVLPSQDRAMKEKARADVAVLEQAVETFRLENLSFPT SEQGLQALVSPPPGLSRPDRYRDGGYVRRLPQDPWGNPYQYRYPGEHGRFDVWSFGADGRQGGEGDDADIGNWS
Sequences:
>Translated_154_residues MTDSVQDQTRPRPRRRRAEAGFTLVEVMVVIVIIGLLATVVMINVLPSQDRAMKEKARADVAVLEQAVETFRLENLSFPT SEQGLQALVSPPPGLSRPDRYRDGGYVRRLPQDPWGNPYQYRYPGEHGRFDVWSFGADGRQGGEGDDADIGNWS >Mature_153_residues TDSVQDQTRPRPRRRRAEAGFTLVEVMVVIVIIGLLATVVMINVLPSQDRAMKEKARADVAVLEQAVETFRLENLSFPTS EQGLQALVSPPPGLSRPDRYRDGGYVRRLPQDPWGNPYQYRYPGEHGRFDVWSFGADGRQGGEGDDADIGNWS
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for secretion of cholera toxin through the outer membrane [H]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP G family [H]
Homologues:
Organism=Escherichia coli, GI1789725, Length=140, Percent_Identity=45.7142857142857, Blast_Score=113, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000983 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR013545 - InterPro: IPR010054 [H]
Pfam domain/function: PF08334 GSPII_G; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 17259; Mature: 17127
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSVQDQTRPRPRRRRAEAGFTLVEVMVVIVIIGLLATVVMINVLPSQDRAMKEKARAD CCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VAVLEQAVETFRLENLSFPTSEQGLQALVSPPPGLSRPDRYRDGGYVRRLPQDPWGNPYQ HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC YRYPGEHGRFDVWSFGADGRQGGEGDDADIGNWS EECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDSVQDQTRPRPRRRRAEAGFTLVEVMVVIVIIGLLATVVMINVLPSQDRAMKEKARAD CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VAVLEQAVETFRLENLSFPTSEQGLQALVSPPPGLSRPDRYRDGGYVRRLPQDPWGNPYQ HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC YRYPGEHGRFDVWSFGADGRQGGEGDDADIGNWS EECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]